| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170022458
Identifier: 170022458
GI number: 170022458
Start: 244811
End: 245398
Strand: Reverse
Name: 170022458
Synonym: YPK_0197
Alternate gene names: NA
Gene position: 245398-244811 (Counterclockwise)
Preceding gene: 170022459
Following gene: 170022457
Centisome position: 5.23
GC content: 53.74
Gene sequence:
>588_bases GTGGCACTTCTGAAACTCCTTAAAGCCTACTGGCAACCCTCGTTAGCACTGCTTGTCGCCGCTGTTGCGGGGTTCGTATT GGCGGCATTGATTTACGGCAAGCAGCTTTCAGATGAGCGACTGACTTTTAGCGAGGCTAAAACCACCTGGTCGGAAGAAA AGACTCGGGCCGCGAATGACGCCAGCGCCGCCCTGACTGCCGCGCTGGAACGTCTGAAGGTCGCTCAACAGTTGGGCGAT AAACTGTCCGCTGAGTTGCAGGCCAAAATCAACGCACTGTATAGCGATAATCAGAGACTCAAGAGGCAAATCAATGATGC GACTCAACAAGATGGCGCTACCTATACTGGCCTTGGGCCTCACAGCCTGTGCGTCTACCAGTCAGCTCTCGGCTACCCCG ATTGTGATCAGCGAGTGCAACCCACCGCCAGCAGTGCTGTACCAACTGCCAGTGAAACCCAGCCCACCCATAGCGGGCTA CCACCAGAGGATATTCTCGCCCACGCCGCAGACTACGGGAAATGGTGCCAGCAATTAGAAACGCAATTAATACAAATCAA TAAATATTATTCGGGCGGTGCCAAATGA
Upstream 100 bases:
>100_bases CAGTCCGGTGATATCTGGTTCAGCCTTTATCTGGCCGCGTGGGTCACTCAAAACCAGGCATCAAAATATCAGGCGCTAAA ACGCGATAAGGAGCTGGCCA
Downstream 100 bases:
>100_bases CATTAGATCTCGGGTTCCAAATCTTATTGGGAATAGTTTCCGCTGTTTTTGGCCTTTGGGTAAAAGAATTACAAAAGGAT ATTTCTAATTTAGAAAAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MALLKLLKAYWQPSLALLVAAVAGFVLAALIYGKQLSDERLTFSEAKTTWSEEKTRAANDASAALTAALERLKVAQQLGD KLSAELQAKINALYSDNQRLKRQINDATQQDGATYTGLGPHSLCVYQSALGYPDCDQRVQPTASSAVPTASETQPTHSGL PPEDILAHAADYGKWCQQLETQLIQINKYYSGGAK
Sequences:
>Translated_195_residues MALLKLLKAYWQPSLALLVAAVAGFVLAALIYGKQLSDERLTFSEAKTTWSEEKTRAANDASAALTAALERLKVAQQLGD KLSAELQAKINALYSDNQRLKRQINDATQQDGATYTGLGPHSLCVYQSALGYPDCDQRVQPTASSAVPTASETQPTHSGL PPEDILAHAADYGKWCQQLETQLIQINKYYSGGAK >Mature_194_residues ALLKLLKAYWQPSLALLVAAVAGFVLAALIYGKQLSDERLTFSEAKTTWSEEKTRAANDASAALTAALERLKVAQQLGDK LSAELQAKINALYSDNQRLKRQINDATQQDGATYTGLGPHSLCVYQSALGYPDCDQRVQPTASSAVPTASETQPTHSGLP PEDILAHAADYGKWCQQLETQLIQINKYYSGGAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21114; Mature: 20983
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLKLLKAYWQPSLALLVAAVAGFVLAALIYGKQLSDERLTFSEAKTTWSEEKTRAAND CHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCH ASAALTAALERLKVAQQLGDKLSAELQAKINALYSDNQRLKRQINDATQQDGATYTGLGP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEECCCCH HSLCVYQSALGYPDCDQRVQPTASSAVPTASETQPTHSGLPPEDILAHAADYGKWCQQLE HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH TQLIQINKYYSGGAK HHHHHHHHHHCCCCC >Mature Secondary Structure ALLKLLKAYWQPSLALLVAAVAGFVLAALIYGKQLSDERLTFSEAKTTWSEEKTRAAND HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCH ASAALTAALERLKVAQQLGDKLSAELQAKINALYSDNQRLKRQINDATQQDGATYTGLGP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEECCCCH HSLCVYQSALGYPDCDQRVQPTASSAVPTASETQPTHSGLPPEDILAHAADYGKWCQQLE HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH TQLIQINKYYSGGAK HHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA