Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

Click here to switch to the map view.

The map label for this gene is 170022457

Identifier: 170022457

GI number: 170022457

Start: 244572

End: 244814

Strand: Reverse

Name: 170022457

Synonym: YPK_0196

Alternate gene names: NA

Gene position: 244814-244572 (Counterclockwise)

Preceding gene: 170022458

Following gene: 170022456

Centisome position: 5.22

GC content: 37.04

Gene sequence:

>243_bases
ATGACATTAGATCTCGGGTTCCAAATCTTATTGGGAATAGTTTCCGCTGTTTTTGGCCTTTGGGTAAAAGAATTACAAAA
GGATATTTCTAATTTAGAAAAATCGGTTGAAACAATAAAAACCGATTATCAGCGGCGTGAAGATGCCAAAACAAACTTTG
ACCTCATGATGGCGACATTACGTGATGTCAGAATTGCCATTGATCGTATTGACGGAAAATTGGATAGGAAGGCAGATAAA
TGA

Upstream 100 bases:

>100_bases
CAGAGGATATTCTCGCCCACGCCGCAGACTACGGGAAATGGTGCCAGCAATTAGAAACGCAATTAATACAAATCAATAAA
TATTATTCGGGCGGTGCCAA

Downstream 100 bases:

>100_bases
AACCACGCCAAAAACGCCGGAGTCGACGTGTTAATGCCGTCAAGAGTGAAGTTAATGCGCTAAATAAAATCAGTAGTCAA
TTAGACCAGCTTTTTATTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 80; Mature: 79

Protein sequence:

>80_residues
MTLDLGFQILLGIVSAVFGLWVKELQKDISNLEKSVETIKTDYQRREDAKTNFDLMMATLRDVRIAIDRIDGKLDRKADK

Sequences:

>Translated_80_residues
MTLDLGFQILLGIVSAVFGLWVKELQKDISNLEKSVETIKTDYQRREDAKTNFDLMMATLRDVRIAIDRIDGKLDRKADK
>Mature_79_residues
TLDLGFQILLGIVSAVFGLWVKELQKDISNLEKSVETIKTDYQRREDAKTNFDLMMATLRDVRIAIDRIDGKLDRKADK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9215; Mature: 9084

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLDLGFQILLGIVSAVFGLWVKELQKDISNLEKSVETIKTDYQRREDAKTNFDLMMATL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
RDVRIAIDRIDGKLDRKADK
HHHHHHHHHHCCHHHCCCCC
>Mature Secondary Structure 
TLDLGFQILLGIVSAVFGLWVKELQKDISNLEKSVETIKTDYQRREDAKTNFDLMMATL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
RDVRIAIDRIDGKLDRKADK
HHHHHHHHHHCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA