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The map label for this gene is cdh [H]

Identifier: 170022366

GI number: 170022366

Start: 124273

End: 125070

Strand: Reverse

Name: cdh [H]

Synonym: YPK_0105

Alternate gene names: 170022366

Gene position: 125070-124273 (Counterclockwise)

Preceding gene: 170022367

Following gene: 170022363

Centisome position: 2.67

GC content: 49.87

Gene sequence:

>798_bases
ATGATTATGAAAAAATCATCAGTGTCACGCTCAATAAAATGGCGTAGATACTTACTGACATTGCTGATCTTGATCATACT
GGCTGCAGGCCTGATTTATAAATTACGTTTCAGTAATGCGGATGCACTCTGGAAGATCATTAGCCAGCAATGTATTCCGC
ATATGACCACAGAAGATGATCCGCGCCCTTGTGCCGAGGTGAATATACCCGCGAGCTTTGCGGTGCTTAAAGATAGGAAT
GGCCCGTTACAGTATTTGTTGATCCCCACCGTACCCATTAGCGGTATTGAAAGCCCGCAATTATTAACCGCCACCAGCCC
GAACTATTTTGCCGACGCTTGGCAGGCTCGCTATTTTATGGCTGAGAAGTACGGCGCGCCTATCGATGACACTGATATCT
CATTAGCCATCAATTCACAATATGGGCGCACACAGGATCAATTGCACATTCATATCTCTTGTCTGAAGCCACAAGTAAAA
ACCGCACTGGCCGCCCATAGCGCCGATTTCCAGCAACAATGGCAGCCGCTGCCTGGCGGCTTACTGGGACACGATTATTG
GGTACGGCGCATCACAGCAACCGAATTGCAACAACCAGGGCCGTTCCATCTGTTAGCCGATGAAATGCCAGGGGCAAAAG
AACAGATGGGCCGTTACGGTCTGGCAATAACCGCACTGCCCTCTGGGGATTTTTTACTGTTGGCCGACAAAGCGAACCTG
ATGACGCAGGATCGCGCCTCAGCAGAGGAACTGCAAGATCACACCTGTCAGGTGCTACCTCACCCCCCGGTGCAATAA

Upstream 100 bases:

>100_bases
TGATAAAGACATTATTGAGGATAAAGACATTGAGGATAAAGATATTGAGGACCAAAACGTAGAAGACAAGAGTTTACCAA
CACGTGGAGAAAAGTAACTT

Downstream 100 bases:

>100_bases
CACATTATTTCTTTTGCTGCATTTTTCGCAGTAACGGTGCGCACTGATTCTCTTCACCTTCACTGGGGGAGATCAGTGCC
AGTAATGCCGCTGCCGGCGT

Product: CDP-diacylglycerol pyrophosphatase

Products: NA

Alternate protein names: CDP-diacylglycerol phosphatidylhydrolase; CDP-diglyceride hydrolase [H]

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MIMKKSSVSRSIKWRRYLLTLLILIILAAGLIYKLRFSNADALWKIISQQCIPHMTTEDDPRPCAEVNIPASFAVLKDRN
GPLQYLLIPTVPISGIESPQLLTATSPNYFADAWQARYFMAEKYGAPIDDTDISLAINSQYGRTQDQLHIHISCLKPQVK
TALAAHSADFQQQWQPLPGGLLGHDYWVRRITATELQQPGPFHLLADEMPGAKEQMGRYGLAITALPSGDFLLLADKANL
MTQDRASAEELQDHTCQVLPHPPVQ

Sequences:

>Translated_265_residues
MIMKKSSVSRSIKWRRYLLTLLILIILAAGLIYKLRFSNADALWKIISQQCIPHMTTEDDPRPCAEVNIPASFAVLKDRN
GPLQYLLIPTVPISGIESPQLLTATSPNYFADAWQARYFMAEKYGAPIDDTDISLAINSQYGRTQDQLHIHISCLKPQVK
TALAAHSADFQQQWQPLPGGLLGHDYWVRRITATELQQPGPFHLLADEMPGAKEQMGRYGLAITALPSGDFLLLADKANL
MTQDRASAEELQDHTCQVLPHPPVQ
>Mature_265_residues
MIMKKSSVSRSIKWRRYLLTLLILIILAAGLIYKLRFSNADALWKIISQQCIPHMTTEDDPRPCAEVNIPASFAVLKDRN
GPLQYLLIPTVPISGIESPQLLTATSPNYFADAWQARYFMAEKYGAPIDDTDISLAINSQYGRTQDQLHIHISCLKPQVK
TALAAHSADFQQQWQPLPGGLLGHDYWVRRITATELQQPGPFHLLADEMPGAKEQMGRYGLAITALPSGDFLLLADKANL
MTQDRASAEELQDHTCQVLPHPPVQ

Specific function: Phospholipid biosynthesis. [C]

COG id: COG2134

COG function: function code I; CDP-diacylglycerol pyrophosphatase

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cdh family [H]

Homologues:

Organism=Escherichia coli, GI1790352, Length=243, Percent_Identity=51.0288065843621, Blast_Score=266, Evalue=1e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003763 [H]

Pfam domain/function: PF02611 CDH [H]

EC number: =3.6.1.26 [H]

Molecular weight: Translated: 29613; Mature: 29613

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMKKSSVSRSIKWRRYLLTLLILIILAAGLIYKLRFSNADALWKIISQQCIPHMTTEDD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHCCCCCCCCC
PRPCAEVNIPASFAVLKDRNGPLQYLLIPTVPISGIESPQLLTATSPNYFADAWQARYFM
CCCCCEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH
AEKYGAPIDDTDISLAINSQYGRTQDQLHIHISCLKPQVKTALAAHSADFQQQWQPLPGG
HHHCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCHHHHHHHHHCCCHHHHCCCCCCC
LLGHDYWVRRITATELQQPGPFHLLADEMPGAKEQMGRYGLAITALPSGDFLLLADKANL
CCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCEEEEEECCCCEEEEECCCCH
MTQDRASAEELQDHTCQVLPHPPVQ
HHCCCCCHHHHHCCCEEECCCCCCC
>Mature Secondary Structure
MIMKKSSVSRSIKWRRYLLTLLILIILAAGLIYKLRFSNADALWKIISQQCIPHMTTEDD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHCCCCCCCCC
PRPCAEVNIPASFAVLKDRNGPLQYLLIPTVPISGIESPQLLTATSPNYFADAWQARYFM
CCCCCEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH
AEKYGAPIDDTDISLAINSQYGRTQDQLHIHISCLKPQVKTALAAHSADFQQQWQPLPGG
HHHCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCHHHHHHHHHCCCHHHHCCCCCCC
LLGHDYWVRRITATELQQPGPFHLLADEMPGAKEQMGRYGLAITALPSGDFLLLADKANL
CCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCEEEEEECCCCEEEEECCCCH
MTQDRASAEELQDHTCQVLPHPPVQ
HHCCCCCHHHHHCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]