| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is yhjG [H]
Identifier: 170022365
GI number: 170022365
Start: 122049
End: 124268
Strand: Direct
Name: yhjG [H]
Synonym: YPK_0104
Alternate gene names: 170022365
Gene position: 122049-124268 (Clockwise)
Preceding gene: 170022364
Following gene: 170022368
Centisome position: 2.6
GC content: 52.79
Gene sequence:
>2220_bases ATGACAAGAACCGGAAAAGTATTGGTGGGCGTCAGTGGGTTTATCCTGTTGTCATTGGTGGCGGCGGTGATATTTGTCGC CTCTTTTGACTGGAATCGCTTGAAGCCAACAATTAACCAAAAAGTCTCCGCCGAGTTGCAACGGCCTTTTGCCATTCGTG GCAATTTGAGTGTGGATTGGTCACGAGAAGGCGAAGGTCCTGGCTGGCGCGGTTGGATCCCCTGGCCGCATATCCATGCG GAAGATTTGGTCTTGGGTAACCCAACGACGTTAATCAGCACACAAGAGAGCCGTGACGCTCAATCAACACAAGGCACGCC GCTCTCCGACGCGTTTCCCACCGGAGAGGGAGAGATGGTGACGCTTAAGCGAATCGACGCCAGCATTGCTCCGCTGTCAT TATTGAACAAAGAAGTTCGTATCCCCCGCCTTTGGCTGACGCAGCCAGACATTCATTTGCAACGCCTGGCGAATGGCAAT AACAACTGGACGTTTAATCTGACCAATACCTCCACGGATAGCTCGTCTTGGTCAGTGGATATCGGCGATATTATTTTTGA TCGCGGTGAGATAACGCTGAAAGATGCCATCCTGCAAGCTGATTTACTCGCGGTGATTGATCCGCTGGCTAAAGCGTTGC CGTTCGCACAAGTGACCGGTGTCCGTCGCGGGGCCAGTATTAATTCGGTGACCAGCACACATTCGGCAAACACGACGACA TCATCGGTCACGACGACATCAGTGGTCACGACTACAGCCACGGCCACGACTAACCCTGTGACAGAGATAGAGACGGTAAA AAGCACGACTCCAGATTACCTCTTCGGCTGGAAAGTAGAAGGTCAGTATCAGGGGCAGCCCTTAGTGGGCAGTGGGAAAA TAGGGGGCATGATATCAATGAATGACGCGAATGTGCCGTTCCCTCTGCAAGCGGATATGCGTTACGGTTCTACTCAGGTG GCCGTCGTCGGGACCTTAACCGATCCCGGAAATCTGGCGGGGCTGGATCTGCAATTGGTCTTATCCGGGACCAGTCTGGA TAACCTCTATCCATTGCTCGATGTCGTACTGCCTGCCACCCCGCCTTATCAGACCGAGGGTCATCTGAGTGCTCGCCTAA AACAAGCAGGGGGCGCGGTTTATCATTATGAAAATTTTAATGGGAAGATTGGTGACAGTGATATTCACGGTGACCTGACG TATACCGACAGCCAGCCCCGGCCGAAATTAGCCGGTCAGGTCGATTCGGAAAAATTACGTTTTACCGATTTGGCTCCGCT GATCGGGGCCGATTCCAATCAGGAAAAAGCCCTACGAGGTGAACGGAATCGGCAGCCGGGCAATAAGATCCTGCCGACAG AAACGTTTGATACCAAAAGTTGGGGAGTGATGGACGCGGATGTCACTTATACGGCTAAGCGTATTGAACGGGATAAGTCA TTACCGCTAAGTGATCTGTACACCCATGTCGTCTTAAAAGAGGGGACGTTACTGCTCGACCCGCTGCGGTTTGGGATGGC GGAAGGGGATCTGGCTGCAACTTTGCGCCTCGATAGTCACCAAACCCCGATGCATGGCAAGGTTGATTTGCATGTCCGGC GCATACAATTAAAAGCCTTGCTGCCACAGGTACAGGCGATGCGGAGCAGCCTGGGGCGCTTGAGTGGTGATGCCTCCTTT ACCGCAGCAGGCAACTCGGTTGCTGGCCTGTTAGCAACCAGCAACGGTAACGTGCGCCTGCTACTGAGCCAGGGGCAGAT CAGCCGTAGCCTGATGGAGTTACTCGGCCTGAATGTGGGTAACTATCTGGTGGCGAAGCTGTTTGGTGATGATACGGTGA AAATTAACTGTGCGGCGGCAGATATTACGTTGCGTAATGGGGTGGCGACGCCGAACGTGTTTGTCTTCGATACTGAAAAT GCCATTATCAATATTACCGGTAATGCTAATTTTGCTACCGAGCGGCTGAATTTATCCATCGATCCTGAAAGCAAAGGGCT ACGTATTCTGACCCTGCGCTCGCCACTGTATGTCAAAGGGACCTTTAAACGCCCCGATGTGGGGGTGAAAACCGGAGCGT TGATTGCCCGAGGTGCCGTTGCGGCAGCACTGGGGGTGGCATTAACGCCGGCAGCGGCATTACTGGCACTGATCTCCCCC AGTGAAGGTGAAGAGAATCAGTGCGCACCGTTACTGCGAAAAATGCAGCAAAAGAAATAA
Upstream 100 bases:
>100_bases CTGTTTGAACAGGTCTTAATCGAGGATAGAGACCCAACACGCTACCCTTAGAGAGAATACGTAGATTCACAGCGACTGTA TGTAGAAGCATGGAGCTATT
Downstream 100 bases:
>100_bases TGTGTTATTGCACCGGGGGGTGAGGTAGCACCTGACAGGTGTGATCTTGCAGTTCCTCTGCTGAGGCGCGATCCTGCGTC ATCAGGTTCGCTTTGTCGGC
Product: AsmA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 739; Mature: 738
Protein sequence:
>739_residues MTRTGKVLVGVSGFILLSLVAAVIFVASFDWNRLKPTINQKVSAELQRPFAIRGNLSVDWSREGEGPGWRGWIPWPHIHA EDLVLGNPTTLISTQESRDAQSTQGTPLSDAFPTGEGEMVTLKRIDASIAPLSLLNKEVRIPRLWLTQPDIHLQRLANGN NNWTFNLTNTSTDSSSWSVDIGDIIFDRGEITLKDAILQADLLAVIDPLAKALPFAQVTGVRRGASINSVTSTHSANTTT SSVTTTSVVTTTATATTNPVTEIETVKSTTPDYLFGWKVEGQYQGQPLVGSGKIGGMISMNDANVPFPLQADMRYGSTQV AVVGTLTDPGNLAGLDLQLVLSGTSLDNLYPLLDVVLPATPPYQTEGHLSARLKQAGGAVYHYENFNGKIGDSDIHGDLT YTDSQPRPKLAGQVDSEKLRFTDLAPLIGADSNQEKALRGERNRQPGNKILPTETFDTKSWGVMDADVTYTAKRIERDKS LPLSDLYTHVVLKEGTLLLDPLRFGMAEGDLAATLRLDSHQTPMHGKVDLHVRRIQLKALLPQVQAMRSSLGRLSGDASF TAAGNSVAGLLATSNGNVRLLLSQGQISRSLMELLGLNVGNYLVAKLFGDDTVKINCAAADITLRNGVATPNVFVFDTEN AIINITGNANFATERLNLSIDPESKGLRILTLRSPLYVKGTFKRPDVGVKTGALIARGAVAAALGVALTPAAALLALISP SEGEENQCAPLLRKMQQKK
Sequences:
>Translated_739_residues MTRTGKVLVGVSGFILLSLVAAVIFVASFDWNRLKPTINQKVSAELQRPFAIRGNLSVDWSREGEGPGWRGWIPWPHIHA EDLVLGNPTTLISTQESRDAQSTQGTPLSDAFPTGEGEMVTLKRIDASIAPLSLLNKEVRIPRLWLTQPDIHLQRLANGN NNWTFNLTNTSTDSSSWSVDIGDIIFDRGEITLKDAILQADLLAVIDPLAKALPFAQVTGVRRGASINSVTSTHSANTTT SSVTTTSVVTTTATATTNPVTEIETVKSTTPDYLFGWKVEGQYQGQPLVGSGKIGGMISMNDANVPFPLQADMRYGSTQV AVVGTLTDPGNLAGLDLQLVLSGTSLDNLYPLLDVVLPATPPYQTEGHLSARLKQAGGAVYHYENFNGKIGDSDIHGDLT YTDSQPRPKLAGQVDSEKLRFTDLAPLIGADSNQEKALRGERNRQPGNKILPTETFDTKSWGVMDADVTYTAKRIERDKS LPLSDLYTHVVLKEGTLLLDPLRFGMAEGDLAATLRLDSHQTPMHGKVDLHVRRIQLKALLPQVQAMRSSLGRLSGDASF TAAGNSVAGLLATSNGNVRLLLSQGQISRSLMELLGLNVGNYLVAKLFGDDTVKINCAAADITLRNGVATPNVFVFDTEN AIINITGNANFATERLNLSIDPESKGLRILTLRSPLYVKGTFKRPDVGVKTGALIARGAVAAALGVALTPAAALLALISP SEGEENQCAPLLRKMQQKK >Mature_738_residues TRTGKVLVGVSGFILLSLVAAVIFVASFDWNRLKPTINQKVSAELQRPFAIRGNLSVDWSREGEGPGWRGWIPWPHIHAE DLVLGNPTTLISTQESRDAQSTQGTPLSDAFPTGEGEMVTLKRIDASIAPLSLLNKEVRIPRLWLTQPDIHLQRLANGNN NWTFNLTNTSTDSSSWSVDIGDIIFDRGEITLKDAILQADLLAVIDPLAKALPFAQVTGVRRGASINSVTSTHSANTTTS SVTTTSVVTTTATATTNPVTEIETVKSTTPDYLFGWKVEGQYQGQPLVGSGKIGGMISMNDANVPFPLQADMRYGSTQVA VVGTLTDPGNLAGLDLQLVLSGTSLDNLYPLLDVVLPATPPYQTEGHLSARLKQAGGAVYHYENFNGKIGDSDIHGDLTY TDSQPRPKLAGQVDSEKLRFTDLAPLIGADSNQEKALRGERNRQPGNKILPTETFDTKSWGVMDADVTYTAKRIERDKSL PLSDLYTHVVLKEGTLLLDPLRFGMAEGDLAATLRLDSHQTPMHGKVDLHVRRIQLKALLPQVQAMRSSLGRLSGDASFT AAGNSVAGLLATSNGNVRLLLSQGQISRSLMELLGLNVGNYLVAKLFGDDTVKINCAAADITLRNGVATPNVFVFDTENA IINITGNANFATERLNLSIDPESKGLRILTLRSPLYVKGTFKRPDVGVKTGALIARGAVAAALGVALTPAAALLALISPS EGEENQCAPLLRKMQQKK
Specific function: Unknown
COG id: COG2982
COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510981, Length=749, Percent_Identity=49.7997329773031, Blast_Score=739, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007844 [H]
Pfam domain/function: PF05170 AsmA [H]
EC number: NA
Molecular weight: Translated: 79478; Mature: 79347
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTGKVLVGVSGFILLSLVAAVIFVASFDWNRLKPTINQKVSAELQRPFAIRGNLSVDW CCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEECCEEEEE SREGEGPGWRGWIPWPHIHAEDLVLGNPTTLISTQESRDAQSTQGTPLSDAFPTGEGEMV CCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEE TLKRIDASIAPLSLLNKEVRIPRLWLTQPDIHLQRLANGNNNWTFNLTNTSTDSSSWSVD EEEECCCCCCCHHHHCCCCCCCEEEECCCCHHHHHHCCCCCCEEEEEECCCCCCCCEEEE IGDIIFDRGEITLKDAILQADLLAVIDPLAKALPFAQVTGVRRGASINSVTSTHSANTTT HHHEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCC SSVTTTSVVTTTATATTNPVTEIETVKSTTPDYLFGWKVEGQYQGQPLVGSGKIGGMISM CCEEEEEEEEEEEECCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCEEECCCCCCCEEEE NDANVPFPLQADMRYGSTQVAVVGTLTDPGNLAGLDLQLVLSGTSLDNLYPLLDVVLPAT CCCCCCCCEECCCCCCCEEEEEEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCC PPYQTEGHLSARLKQAGGAVYHYENFNGKIGDSDIHGDLTYTDSQPRPKLAGQVDSEKLR CCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEE FTDLAPLIGADSNQEKALRGERNRQPGNKILPTETFDTKSWGVMDADVTYTAKRIERDKS EEECCHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHCCCC LPLSDLYTHVVLKEGTLLLDPLRFGMAEGDLAATLRLDSHQTPMHGKVDLHVRRIQLKAL CCHHHHHHEEEEECCCEEECHHHHCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEHHHH LPQVQAMRSSLGRLSGDASFTAAGNSVAGLLATSNGNVRLLLSQGQISRSLMELLGLNVG HHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEECCCCEEEEEECCHHHHHHHHHHCCCCC NYLVAKLFGDDTVKINCAAADITLRNGVATPNVFVFDTENAIINITGNANFATERLNLSI CEEEEEEECCCEEEEEEEEEEEEEECCCCCCEEEEEECCCEEEEEECCCCEEEEEEEEEE DPESKGLRILTLRSPLYVKGTFKRPDVGVKTGALIARGAVAAALGVALTPAAALLALISP CCCCCCEEEEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECC SEGEENQCAPLLRKMQQKK CCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TRTGKVLVGVSGFILLSLVAAVIFVASFDWNRLKPTINQKVSAELQRPFAIRGNLSVDW CCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEECCEEEEE SREGEGPGWRGWIPWPHIHAEDLVLGNPTTLISTQESRDAQSTQGTPLSDAFPTGEGEMV CCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEE TLKRIDASIAPLSLLNKEVRIPRLWLTQPDIHLQRLANGNNNWTFNLTNTSTDSSSWSVD EEEECCCCCCCHHHHCCCCCCCEEEECCCCHHHHHHCCCCCCEEEEEECCCCCCCCEEEE IGDIIFDRGEITLKDAILQADLLAVIDPLAKALPFAQVTGVRRGASINSVTSTHSANTTT HHHEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCC SSVTTTSVVTTTATATTNPVTEIETVKSTTPDYLFGWKVEGQYQGQPLVGSGKIGGMISM CCEEEEEEEEEEEECCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCEEECCCCCCCEEEE NDANVPFPLQADMRYGSTQVAVVGTLTDPGNLAGLDLQLVLSGTSLDNLYPLLDVVLPAT CCCCCCCCEECCCCCCCEEEEEEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCC PPYQTEGHLSARLKQAGGAVYHYENFNGKIGDSDIHGDLTYTDSQPRPKLAGQVDSEKLR CCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEE FTDLAPLIGADSNQEKALRGERNRQPGNKILPTETFDTKSWGVMDADVTYTAKRIERDKS EEECCHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHCCCC LPLSDLYTHVVLKEGTLLLDPLRFGMAEGDLAATLRLDSHQTPMHGKVDLHVRRIQLKAL CCHHHHHHEEEEECCCEEECHHHHCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEHHHH LPQVQAMRSSLGRLSGDASFTAAGNSVAGLLATSNGNVRLLLSQGQISRSLMELLGLNVG HHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEECCCCEEEEEECCHHHHHHHHHHCCCCC NYLVAKLFGDDTVKINCAAADITLRNGVATPNVFVFDTENAIINITGNANFATERLNLSI CEEEEEEECCCEEEEEEEEEEEEEECCCCCCEEEEEECCCEEEEEECCCCEEEEEEEEEE DPESKGLRILTLRSPLYVKGTFKRPDVGVKTGALIARGAVAAALGVALTPAAALLALISP CCCCCCEEEEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECC SEGEENQCAPLLRKMQQKK CCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]