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The map label for this gene is yhjH [H]

Identifier: 170022364

GI number: 170022364

Start: 120899

End: 121744

Strand: Direct

Name: yhjH [H]

Synonym: YPK_0103

Alternate gene names: 170022364

Gene position: 120899-121744 (Clockwise)

Preceding gene: 170022361

Following gene: 170022365

Centisome position: 2.58

GC content: 48.82

Gene sequence:

>846_bases
ATGGCGACTAAACTGATGATGACCAACAGAATATCAGCCTTACTTGCGCCATCCTTTGCCGCGATTGATCAGACAAAGAG
GCTTGATCAGACAAGGAAGTTCGGTCAGATCAAAGAAATTGAACGAACAAAAGGACAGAGCTTCTGGCGGCAATGTCAGC
GGCGGTATACTTTTCAACCCATTTATCGCACATCCGGGGCGTTGCTGGCGATTGAGTTGCTCACGGCGGTTTTTCACCCC
TCAGCACCGGAGACCCGTTTATCACCGGAAGATTACTTCAGCACTATCAGCACGGGTGCCCGTCTGGATGTGGTGCTCGA
GCAGTTGAACATGGTTAAGCAGTGGCATCAGATATTTGTTCATCACTCGGTATTGGTATCGATCAATATTGATGGTCAGG
TATTGGTGGCGATGCAGGAGGATCACGCGGCCAAGCGGCTGATTGATGCGATGCCTTATATCCGTTTTGAGTTACTTGAA
CACGTTGATACTTCACTGGATACCCCCTTCGCGCGTATTGCCGAAGCTGATCGACTCTGGTTGGACGATTTCGGTAGCGG
GCTGGCGAATTTCACCTCATTCATTAGCTGGCGCTATGAATATATTAAAGTGGCCAGAGATCTGTTTACTGTATTGCAAG
ACAGTGAGGCAGGAAATCGGCTCTTTTTCACACTAGTCACATTAATGGATCGCTACAGTAAAGGCGTTATTGTTGAAGGG
GTAGAAACTTCTCAAGAATGGGCGATGGTGCAGCGTTCCGATGCCGTTGCTGCGCAGGGCTATTATCTTTCTCGACCGAC
ATCATTTGATGGGTTACAGGCACTCCCGATGCTGTTTTGCGGCTAA

Upstream 100 bases:

>100_bases
GCCTGAGTCGATAACATCAGCAGAAGGAAAACCGTTTACTACAGGATGTCAGCATGACAGCGATAGCCCGCCCCGCCATT
GCTGTTTGGTACCCTGAAAC

Downstream 100 bases:

>100_bases
CGCTCCCTAAGGCGATAATGATCGCCTTTCATCTTCTCCTGCCTGCCTCACGGGTTCTAACGGTATAACCGGATTTTCAC
TGTCTAAATAGTGGATTCTG

Product: EAL domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MATKLMMTNRISALLAPSFAAIDQTKRLDQTRKFGQIKEIERTKGQSFWRQCQRRYTFQPIYRTSGALLAIELLTAVFHP
SAPETRLSPEDYFSTISTGARLDVVLEQLNMVKQWHQIFVHHSVLVSINIDGQVLVAMQEDHAAKRLIDAMPYIRFELLE
HVDTSLDTPFARIAEADRLWLDDFGSGLANFTSFISWRYEYIKVARDLFTVLQDSEAGNRLFFTLVTLMDRYSKGVIVEG
VETSQEWAMVQRSDAVAAQGYYLSRPTSFDGLQALPMLFCG

Sequences:

>Translated_281_residues
MATKLMMTNRISALLAPSFAAIDQTKRLDQTRKFGQIKEIERTKGQSFWRQCQRRYTFQPIYRTSGALLAIELLTAVFHP
SAPETRLSPEDYFSTISTGARLDVVLEQLNMVKQWHQIFVHHSVLVSINIDGQVLVAMQEDHAAKRLIDAMPYIRFELLE
HVDTSLDTPFARIAEADRLWLDDFGSGLANFTSFISWRYEYIKVARDLFTVLQDSEAGNRLFFTLVTLMDRYSKGVIVEG
VETSQEWAMVQRSDAVAAQGYYLSRPTSFDGLQALPMLFCG
>Mature_280_residues
ATKLMMTNRISALLAPSFAAIDQTKRLDQTRKFGQIKEIERTKGQSFWRQCQRRYTFQPIYRTSGALLAIELLTAVFHPS
APETRLSPEDYFSTISTGARLDVVLEQLNMVKQWHQIFVHHSVLVSINIDGQVLVAMQEDHAAKRLIDAMPYIRFELLEH
VDTSLDTPFARIAEADRLWLDDFGSGLANFTSFISWRYEYIKVARDLFTVLQDSEAGNRLFFTLVTLMDRYSKGVIVEGV
ETSQEWAMVQRSDAVAAQGYYLSRPTSFDGLQALPMLFCG

Specific function: A bis-(3'-5') cyclic diguanylic acid (c-di-GMP) phosphodiesterase involved in regulating the levels of c-di-GMP that control cell motility (the flagella) and adhesion (adhesive curli fimbriae). The YhjH effect on flagella is controlled via the c-di-GMP-bi

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI87082280, Length=234, Percent_Identity=48.7179487179487, Blast_Score=246, Evalue=1e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: =3.1.4.52 [H]

Molecular weight: Translated: 32094; Mature: 31963

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATKLMMTNRISALLAPSFAAIDQTKRLDQTRKFGQIKEIERTKGQSFWRQCQRRYTFQP
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHCCCCCH
IYRTSGALLAIELLTAVFHPSAPETRLSPEDYFSTISTGARLDVVLEQLNMVKQWHQIFV
HHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
HHSVLVSINIDGQVLVAMQEDHAAKRLIDAMPYIRFELLEHVDTSLDTPFARIAEADRLW
HHEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LDDFGSGLANFTSFISWRYEYIKVARDLFTVLQDSEAGNRLFFTLVTLMDRYSKGVIVEG
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEC
VETSQEWAMVQRSDAVAAQGYYLSRPTSFDGLQALPMLFCG
CCCHHHHHHHHHCCCHHHCCEEECCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
ATKLMMTNRISALLAPSFAAIDQTKRLDQTRKFGQIKEIERTKGQSFWRQCQRRYTFQP
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHCCCCCH
IYRTSGALLAIELLTAVFHPSAPETRLSPEDYFSTISTGARLDVVLEQLNMVKQWHQIFV
HHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
HHSVLVSINIDGQVLVAMQEDHAAKRLIDAMPYIRFELLEHVDTSLDTPFARIAEADRLW
HHEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LDDFGSGLANFTSFISWRYEYIKVARDLFTVLQDSEAGNRLFFTLVTLMDRYSKGVIVEG
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEC
VETSQEWAMVQRSDAVAAQGYYLSRPTSFDGLQALPMLFCG
CCCHHHHHHHHHCCCHHHCCEEECCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]