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The map label for this gene is ybgO [H]

Identifier: 170022316

GI number: 170022316

Start: 59685

End: 60671

Strand: Direct

Name: ybgO [H]

Synonym: YPK_0054

Alternate gene names: 170022316

Gene position: 59685-60671 (Clockwise)

Preceding gene: 170022315

Following gene: 170022319

Centisome position: 1.27

GC content: 41.44

Gene sequence:

>987_bases
ATGATGCAGACTATTTTAAATAAAATAGGTCGAATCGGTGGCTGTATTGCCCTGTCATTCGTGGCAATGCTGTTGTCGCA
AGCTGCCTATGCGCTTGATTGTGTAGAGAAAGGTACTAATGTTGTGAATAAACCCGGCATTCCGATAGGCCAATTAGCAA
TACCGTCTAACATTGCCCCTGGCACAAAAATCTGGGAATCGAGAGATATTACGGTAACGGCATACTGCGACAATGTTTTA
GGCTCGGTATATGATCAGGTCTGGTTCTATTTTAATCCGCTTGGGCAATCATTAGGGCCAGGGTTACAGTTAGGTGTCAA
CTACTTAGGGCAAGATCTACAAGCCAACGCTGCTCGTTTAAACACCAATACCAGCCCAATCACTAGCGGGCAGAACGTGA
CGGTAACAGTGACTTTCCGTCTGTATATTAAAGTGACTAATGATCTTCCCTCCAGTGGAAATTATATCGGCACGGATAGC
TTTACGGTATTCCAATTGGATGGCTCTGGTGGTATTAACGTTACTGTGGGTGCCAAAAATTTGAAATATACCTTGTCTGG
TTTAAGCATTGTACGTTTTATTCCCTGTGGTGCGGATTTAGTGATTTCTCCGGCGTCACAAGTTGTGAATTTTGGTTCAT
TTAATCAAGCCCGGTTACTGTCTAGTAATAATAATCTCAGTCGGCCTTTTTCTATTACTGCGATAAAACAAGGTTGCTTG
GCTAATTTTTCCATTCAGGCACAGTTTTTAACCGCTAACCCATTAGTGGGTGACAATGCGATTGATCTGCAAAACGGCAT
TAAACTGACCATTTATGATGATAAAAATCAGGCAATTGTATACAACCGTTATGCTGATTTTGCACAATTGAATAATATTA
CTCAGGTGACAAGAAATTATACTGCCCGCCTAAATGCCATTGAAGGACAACCGATAAAGCTGGGCCAGTTTGACGCTACG
GCAATCATTAAGATTAATTATTATTAG

Upstream 100 bases:

>100_bases
TACGCACTTTTAACTGTTTATCAGCAGAATGCCAAATTCAGCCAGCTGAAAAGAGAAGGTGATACACGTACCCGGTTCAG
CATATGAATAAGGAATAACA

Downstream 100 bases:

>100_bases
TGTGTGAGCCGTGGCCCTATAAAAATGTGCTGAGTAATAATGAATTACCCAGCACGGTGTTTATTCGCACTCTTGACGAC
TACTCACACTCTTGACAACT

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MMQTILNKIGRIGGCIALSFVAMLLSQAAYALDCVEKGTNVVNKPGIPIGQLAIPSNIAPGTKIWESRDITVTAYCDNVL
GSVYDQVWFYFNPLGQSLGPGLQLGVNYLGQDLQANAARLNTNTSPITSGQNVTVTVTFRLYIKVTNDLPSSGNYIGTDS
FTVFQLDGSGGINVTVGAKNLKYTLSGLSIVRFIPCGADLVISPASQVVNFGSFNQARLLSSNNNLSRPFSITAIKQGCL
ANFSIQAQFLTANPLVGDNAIDLQNGIKLTIYDDKNQAIVYNRYADFAQLNNITQVTRNYTARLNAIEGQPIKLGQFDAT
AIIKINYY

Sequences:

>Translated_328_residues
MMQTILNKIGRIGGCIALSFVAMLLSQAAYALDCVEKGTNVVNKPGIPIGQLAIPSNIAPGTKIWESRDITVTAYCDNVL
GSVYDQVWFYFNPLGQSLGPGLQLGVNYLGQDLQANAARLNTNTSPITSGQNVTVTVTFRLYIKVTNDLPSSGNYIGTDS
FTVFQLDGSGGINVTVGAKNLKYTLSGLSIVRFIPCGADLVISPASQVVNFGSFNQARLLSSNNNLSRPFSITAIKQGCL
ANFSIQAQFLTANPLVGDNAIDLQNGIKLTIYDDKNQAIVYNRYADFAQLNNITQVTRNYTARLNAIEGQPIKLGQFDAT
AIIKINYY
>Mature_328_residues
MMQTILNKIGRIGGCIALSFVAMLLSQAAYALDCVEKGTNVVNKPGIPIGQLAIPSNIAPGTKIWESRDITVTAYCDNVL
GSVYDQVWFYFNPLGQSLGPGLQLGVNYLGQDLQANAARLNTNTSPITSGQNVTVTVTFRLYIKVTNDLPSSGNYIGTDS
FTVFQLDGSGGINVTVGAKNLKYTLSGLSIVRFIPCGADLVISPASQVVNFGSFNQARLLSSNNNLSRPFSITAIKQGCL
ANFSIQAQFLTANPLVGDNAIDLQNGIKLTIYDDKNQAIVYNRYADFAQLNNITQVTRNYTARLNAIEGQPIKLGQFDAT
AIIKINYY

Specific function: May be involved in a fimbrial system chaperoned by ybgP and exported by ybgQ [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yqiI [H]

Homologues:

Organism=Escherichia coli, GI87081777, Length=337, Percent_Identity=31.7507418397626, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI1789427, Length=352, Percent_Identity=25.2840909090909, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35403; Mature: 35403

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQTILNKIGRIGGCIALSFVAMLLSQAAYALDCVEKGTNVVNKPGIPIGQLAIPSNIAP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCC
GTKIWESRDITVTAYCDNVLGSVYDQVWFYFNPLGQSLGPGLQLGVNYLGQDLQANAARL
CCCEECCCCEEEEEEHHHHHHHHHHHHHEEECHHHHHHCCCCEECHHHCCCCCCCCCEEE
NTNTSPITSGQNVTVTVTFRLYIKVTNDLPSSGNYIGTDSFTVFQLDGSGGINVTVGAKN
CCCCCCCCCCCEEEEEEEEEEEEEEECCCCCCCCEECCCCEEEEEEECCCCEEEEEECCC
LKYTLSGLSIVRFIPCGADLVISPASQVVNFGSFNQARLLSSNNNLSRPFSITAIKQGCL
EEEEECCEEEEEEECCCCCEEECCHHHHHCCCCCCCEEEEECCCCCCCCEEEEEECCCCE
ANFSIQAQFLTANPLVGDNAIDLQNGIKLTIYDDKNQAIVYNRYADFAQLNNITQVTRNY
ECEEEEEEEEEECCCCCCCCEECCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHCC
TARLNAIEGQPIKLGQFDATAIIKINYY
EEEEEECCCCCEEECCCCCEEEEEEEEC
>Mature Secondary Structure
MMQTILNKIGRIGGCIALSFVAMLLSQAAYALDCVEKGTNVVNKPGIPIGQLAIPSNIAP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCC
GTKIWESRDITVTAYCDNVLGSVYDQVWFYFNPLGQSLGPGLQLGVNYLGQDLQANAARL
CCCEECCCCEEEEEEHHHHHHHHHHHHHEEECHHHHHHCCCCEECHHHCCCCCCCCCEEE
NTNTSPITSGQNVTVTVTFRLYIKVTNDLPSSGNYIGTDSFTVFQLDGSGGINVTVGAKN
CCCCCCCCCCCEEEEEEEEEEEEEEECCCCCCCCEECCCCEEEEEEECCCCEEEEEECCC
LKYTLSGLSIVRFIPCGADLVISPASQVVNFGSFNQARLLSSNNNLSRPFSITAIKQGCL
EEEEECCEEEEEEECCCCCEEECCHHHHHCCCCCCCEEEEECCCCCCCCEEEEEECCCCE
ANFSIQAQFLTANPLVGDNAIDLQNGIKLTIYDDKNQAIVYNRYADFAQLNNITQVTRNY
ECEEEEEEEEEECCCCCCCCEECCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHCC
TARLNAIEGQPIKLGQFDATAIIKINYY
EEEEEECCCCCEEECCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]