| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630934
Identifier: 169630934
GI number: 169630934
Start: 3901612
End: 3902154
Strand: Reverse
Name: 169630934
Synonym: MAB_3855c
Alternate gene names: NA
Gene position: 3902154-3901612 (Counterclockwise)
Preceding gene: 169630935
Following gene: 169630931
Centisome position: 77.01
GC content: 63.35
Gene sequence:
>543_bases ATGAGAAAGATCTTCGGCACCCTGGCTGCTGTGCTGCTATTGCTGGCGGCACCTACCGGCTGCGCACACACGGTGGACGG TACCGCCGTGGCCCCGGGCGAGGGACTGTCGTCCAACGAGCGGGGCGAGAACGACAAGCTGGATCCGTACGGATTCGCCA ACGGCCAGTGTGGTCCCCTCGACGAGAAGACCATTGTCGAGACCGTGAAGGCCGCCCAGATCTACCAGAATTTCTTTGGT GCACTGTGCTATTGGGTTGCGGCAGACGATGCCGGAAACCTCATCGACCTGTTGTACGCGTACTACGAGGGCGGCGACGT CGAACGTGATCGCACGTCCGCCGACGGTATGGGGCAGAAGACCGCCGACATCACCATCAACAGCCGCAAGGGATTCACCA GCAGCGGCCCCGGTTCGGGCTGCGGTGTCACAGTGCCGGCCGGAACCGGTTCGCTGACCTGGTGGGTTCAGTACCGCAAG GGCGGAGACAGCTGTGCCGCCGCGCGCCAGCTGGTCGAACACATCGTGCAGACGGTGTTGTGA
Upstream 100 bases:
>100_bases ATTTCCTGCACTGGTCGCTGCAATCGAGCGCGGTCAAAAATGATCCGTGTAAGGCCGTCGAGACCCTGATGGACTCACTG CTCGGCAAGGTGGGTAAGCA
Downstream 100 bases:
>100_bases GCCAGAGCTAGGAAGCCTTCTGAATGGTGTTGTTGCTTCCGTAGTTGTTGACCTTGGGTTCGCCTGTCTTGTACGTGAGC TTGTTCCCGTAGCCGGTGAC
Product: putative lipoprotein LprC
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MRKIFGTLAAVLLLLAAPTGCAHTVDGTAVAPGEGLSSNERGENDKLDPYGFANGQCGPLDEKTIVETVKAAQIYQNFFG ALCYWVAADDAGNLIDLLYAYYEGGDVERDRTSADGMGQKTADITINSRKGFTSSGPGSGCGVTVPAGTGSLTWWVQYRK GGDSCAAARQLVEHIVQTVL
Sequences:
>Translated_180_residues MRKIFGTLAAVLLLLAAPTGCAHTVDGTAVAPGEGLSSNERGENDKLDPYGFANGQCGPLDEKTIVETVKAAQIYQNFFG ALCYWVAADDAGNLIDLLYAYYEGGDVERDRTSADGMGQKTADITINSRKGFTSSGPGSGCGVTVPAGTGSLTWWVQYRK GGDSCAAARQLVEHIVQTVL >Mature_180_residues MRKIFGTLAAVLLLLAAPTGCAHTVDGTAVAPGEGLSSNERGENDKLDPYGFANGQCGPLDEKTIVETVKAAQIYQNFFG ALCYWVAADDAGNLIDLLYAYYEGGDVERDRTSADGMGQKTADITINSRKGFTSSGPGSGCGVTVPAGTGSLTWWVQYRK GGDSCAAARQLVEHIVQTVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18915; Mature: 18915
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKIFGTLAAVLLLLAAPTGCAHTVDGTAVAPGEGLSSNERGENDKLDPYGFANGQCGPL CHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DEKTIVETVKAAQIYQNFFGALCYWVAADDAGNLIDLLYAYYEGGDVERDRTSADGMGQK CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC TADITINSRKGFTSSGPGSGCGVTVPAGTGSLTWWVQYRKGGDSCAAARQLVEHIVQTVL EEEEEEECCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHC >Mature Secondary Structure MRKIFGTLAAVLLLLAAPTGCAHTVDGTAVAPGEGLSSNERGENDKLDPYGFANGQCGPL CHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DEKTIVETVKAAQIYQNFFGALCYWVAADDAGNLIDLLYAYYEGGDVERDRTSADGMGQK CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC TADITINSRKGFTSSGPGSGCGVTVPAGTGSLTWWVQYRKGGDSCAAARQLVEHIVQTVL EEEEEEECCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA