| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630935
Identifier: 169630935
GI number: 169630935
Start: 3902151
End: 3902705
Strand: Reverse
Name: 169630935
Synonym: MAB_3856c
Alternate gene names: NA
Gene position: 3902705-3902151 (Counterclockwise)
Preceding gene: 169630936
Following gene: 169630934
Centisome position: 77.02
GC content: 64.68
Gene sequence:
>555_bases GTGACTGTGCGGATGCTCCCGGTTTCGGCCCTGGTCATCGCCGCAGCGGTGCTGGTCGGATGTTCGTCCCGGCCCTCATC CGATGGCGACGGCGACGGCGGCTCGCCCGACGCCCAGGTGACCACGGTGCCCGAGGTGAACAACGGTCCCGGCAAGGGTT TCAAACTCGGAGACTGCGGCGGTATGACCGATGCGGAAGTCAATGCGGCGGTGGGTGTTCCGGGCCTCAAGCGCGATGTG GACAGTCTGCTGGGCTGCCGGTGGTCCACCGGGCCGGGAACCGGCGACACATCCATCTCGCTGTACTGGTACCGGGGTAG CTCGGCCCAGAAGGAGGCTTCGGTCGCGCGAAATCTCGGACATACCGTCGAAGCGGTGACCACCAAGTCCTACCCCGGCT ACCGGGTCAGCAACGTTGGGTTGTGCGAGCTGTCTGCGGGGTCGGGACCGGATTTCCTGCACTGGTCGCTGCAATCGAGC GCGGTCAAAAATGATCCGTGTAAGGCCGTCGAGACCCTGATGGACTCACTGCTCGGCAAGGTGGGTAAGCAATGA
Upstream 100 bases:
>100_bases AGGGCCGGCATGGAGCCGGGGTCTGACACACCCGGCTCCAGGCACCGACACACTTCGCACATATCGGTGACGCGCAAGAC GCGGACGTACTGTGGACACC
Downstream 100 bases:
>100_bases GAAAGATCTTCGGCACCCTGGCTGCTGTGCTGCTATTGCTGGCGGCACCTACCGGCTGCGCACACACGGTGGACGGTACC GCCGTGGCCCCGGGCGAGGG
Product: putative lipoprotein LprB precursor
Products: NA
Alternate protein names: Lipoprotein; LprB Protein
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MTVRMLPVSALVIAAAVLVGCSSRPSSDGDGDGGSPDAQVTTVPEVNNGPGKGFKLGDCGGMTDAEVNAAVGVPGLKRDV DSLLGCRWSTGPGTGDTSISLYWYRGSSAQKEASVARNLGHTVEAVTTKSYPGYRVSNVGLCELSAGSGPDFLHWSLQSS AVKNDPCKAVETLMDSLLGKVGKQ
Sequences:
>Translated_184_residues MTVRMLPVSALVIAAAVLVGCSSRPSSDGDGDGGSPDAQVTTVPEVNNGPGKGFKLGDCGGMTDAEVNAAVGVPGLKRDV DSLLGCRWSTGPGTGDTSISLYWYRGSSAQKEASVARNLGHTVEAVTTKSYPGYRVSNVGLCELSAGSGPDFLHWSLQSS AVKNDPCKAVETLMDSLLGKVGKQ >Mature_183_residues TVRMLPVSALVIAAAVLVGCSSRPSSDGDGDGGSPDAQVTTVPEVNNGPGKGFKLGDCGGMTDAEVNAAVGVPGLKRDVD SLLGCRWSTGPGTGDTSISLYWYRGSSAQKEASVARNLGHTVEAVTTKSYPGYRVSNVGLCELSAGSGPDFLHWSLQSSA VKNDPCKAVETLMDSLLGKVGKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18862; Mature: 18731
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVRMLPVSALVIAAAVLVGCSSRPSSDGDGDGGSPDAQVTTVPEVNNGPGKGFKLGDCG CEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEECCCC GMTDAEVNAAVGVPGLKRDVDSLLGCRWSTGPGTGDTSISLYWYRGSSAQKEASVARNLG CCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCC HTVEAVTTKSYPGYRVSNVGLCELSAGSGPDFLHWSLQSSAVKNDPCKAVETLMDSLLGK CCEEEEEECCCCCEEECCCEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHH VGKQ HCCC >Mature Secondary Structure TVRMLPVSALVIAAAVLVGCSSRPSSDGDGDGGSPDAQVTTVPEVNNGPGKGFKLGDCG EEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEECCCC GMTDAEVNAAVGVPGLKRDVDSLLGCRWSTGPGTGDTSISLYWYRGSSAQKEASVARNLG CCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCC HTVEAVTTKSYPGYRVSNVGLCELSAGSGPDFLHWSLQSSAVKNDPCKAVETLMDSLLGK CCEEEEEECCCCCEEECCCEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHH VGKQ HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA