| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630881
Identifier: 169630881
GI number: 169630881
Start: 3854896
End: 3855435
Strand: Reverse
Name: 169630881
Synonym: MAB_3801c
Alternate gene names: NA
Gene position: 3855435-3854896 (Counterclockwise)
Preceding gene: 169630882
Following gene: 169630880
Centisome position: 76.09
GC content: 67.22
Gene sequence:
>540_bases ATGGACACACCGATGCAGGTCTCGCAGGGTCGACGAGGAATCAGCAAGGCGCGCGTGCGCGCAACCGGCGTGGCGGCGCT CACAGCGCTGGCGCTGGTGGCTCTACCCGGTGTGGCCGGCGCAGACCCCGAGGTGCTGCAGTCCAACGATCAGCTCGGCT TGCGCTTCGAGAAGTCCAGTACGCCTCAGCCGGAAGGTGCCACCACCACCGTCACGGTGCGCACCGGCGACGGCAAGGTC GTGCAGACGATCTCGGAGCCGTTCAAGGGCTGGCTCGGCGGTGCCGCCGTTGAGTTGCTCGACATCGATCAGGACGGACG CGACGATCTGCTGGTTCAGGTCGACGCCCGCGTGAAAGACGGCAAGTGGGCCATCTGGCACGCGGTCGGCAGCAACCCGA AGCTGTCGCGCGTGGGCGTGGTGGACGGACATCCGGAAAGTGCCGGACCCGGACTGATCAAGGCCGATACCGAGCAGGGC ACCGTCTTCTACGTCATCAAGGGCAACGCTTTGGCGCCCGCGCCGGCTCCCGCTGCCTAA
Upstream 100 bases:
>100_bases GCATTGCTGATAGTCCGGCAGTGGCTCGACAAACTCGCTGATCTAGAGCGTCAGGTGACGGGGGTCGTCGATGAATTCAT GTCTGAGCAAATTTTGACGA
Downstream 100 bases:
>100_bases TCGCGGGTCTGATGCCGCGTCGTTAGCCAAATGTGCTGTGGTGCACTCTATTAGGTATGCCAGAGGCCTTGCATCCCGTC TTCCAGTCACGCTTCGAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MDTPMQVSQGRRGISKARVRATGVAALTALALVALPGVAGADPEVLQSNDQLGLRFEKSSTPQPEGATTTVTVRTGDGKV VQTISEPFKGWLGGAAVELLDIDQDGRDDLLVQVDARVKDGKWAIWHAVGSNPKLSRVGVVDGHPESAGPGLIKADTEQG TVFYVIKGNALAPAPAPAA
Sequences:
>Translated_179_residues MDTPMQVSQGRRGISKARVRATGVAALTALALVALPGVAGADPEVLQSNDQLGLRFEKSSTPQPEGATTTVTVRTGDGKV VQTISEPFKGWLGGAAVELLDIDQDGRDDLLVQVDARVKDGKWAIWHAVGSNPKLSRVGVVDGHPESAGPGLIKADTEQG TVFYVIKGNALAPAPAPAA >Mature_179_residues MDTPMQVSQGRRGISKARVRATGVAALTALALVALPGVAGADPEVLQSNDQLGLRFEKSSTPQPEGATTTVTVRTGDGKV VQTISEPFKGWLGGAAVELLDIDQDGRDDLLVQVDARVKDGKWAIWHAVGSNPKLSRVGVVDGHPESAGPGLIKADTEQG TVFYVIKGNALAPAPAPAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18527; Mature: 18527
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTPMQVSQGRRGISKARVRATGVAALTALALVALPGVAGADPEVLQSNDQLGLRFEKSS CCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEEEEECCCC TPQPEGATTTVTVRTGDGKVVQTISEPFKGWLGGAAVELLDIDQDGRDDLLVQVDARVKD CCCCCCCEEEEEEECCCCCEEHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECEECC GKWAIWHAVGSNPKLSRVGVVDGHPESAGPGLIKADTEQGTVFYVIKGNALAPAPAPAA CCEEEEEEECCCCCEEEEEEECCCCCCCCCCEEEECCCCCEEEEEEECCEECCCCCCCC >Mature Secondary Structure MDTPMQVSQGRRGISKARVRATGVAALTALALVALPGVAGADPEVLQSNDQLGLRFEKSS CCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEEEEECCCC TPQPEGATTTVTVRTGDGKVVQTISEPFKGWLGGAAVELLDIDQDGRDDLLVQVDARVKD CCCCCCCEEEEEEECCCCCEEHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECEECC GKWAIWHAVGSNPKLSRVGVVDGHPESAGPGLIKADTEQGTVFYVIKGNALAPAPAPAA CCEEEEEEECCCCCEEEEEEECCCCCCCCCCEEEECCCCCEEEEEEECCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA