| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630870
Identifier: 169630870
GI number: 169630870
Start: 3846520
End: 3848103
Strand: Direct
Name: 169630870
Synonym: MAB_3790
Alternate gene names: NA
Gene position: 3846520-3848103 (Clockwise)
Preceding gene: 169630867
Following gene: 169630871
Centisome position: 75.91
GC content: 64.96
Gene sequence:
>1584_bases ATGACACGTGCAGACAAGACGACGGTCCGGAAGGCGGCCCACCTGGCGGCGCTACTCGCGCTGACCGTGGCACCTGCGAT GTCCGGGTGCCTGGATACGTCCGGCTCACGCGAGCTGACACCGTCGCAATCGACGTCGTCGACGGCCGCGACGCCCACTC GTAGCTATCCCGCGCTGCCGCCGGAGTATCGCGGCAAGTTCCATCCCAACCACACGGATCTGGGTGGACGAAACAACGCC GAGCTCGCCAGTCTGCTGCCGACGGCCGCCGACTTCCCTGGCCCCGGCGAGACTCGTGCTCCCGATATCGCCTCCGACGA CGGTTCCGGGCTAGGCATGCACGGCCAAACCGACGGTGAGACACGTCCGCCCGAATGCCTGTATGCCCCTTTCTCCAAGT CGTTTTCGAGAACCCCCGACGGGTCGGACTGGAACCTGTACTACGCGGCCTCGACCTACCACGAGGCCGAACCCCCCGGT AACCACATCACCGTCACGGTGAACCGGGAACGCGAGAACGCCGACGTGTTCGCCCTGACCGCCGACTGGATCAAGAAATG CGGTCAGTACGACAGGGCGTTTCCGGCCTTCGCCAAGCCGGAGGTGCGCAACCGGCACGTCACCGACACCTTCGGCCCCG GCCCGACGGTCGACGGCGTACAGACCTACGTCTACACGACCGCGAGCACGGATCTCGATGACACATCCGCCGACAAGCAA CCGTCCGGGGTTCGCGGACAGCGCATCGTGCTGGCCCGGGTGCGCTCGCTGGTGTTCGAGGTCGCGGGCACCGACCAGGT GGATGGCGGCTTGTTGGACCAACTGTTGGCCATCACCATCACCAACGCCAAGCACGCACCGCCGCCACCGGACCAAAACG CCGCGCGCTTGGCCGGGCTTCCCACCTGCGACACCATCGCACCGCAGCCCATGAATGGGCAACCGGATCCGGCGCTGGAC TGCACCATCCATACCTCGGATGGCAGCGGCGTGGTCTTCGAGGTACTCGGCACGCCCGCCGGGACCATACGTGTGTTCAA CGGAAATGGCGCGCAGCTGCAGTCCATCAGGGTGCCCAATCCGATCTTCCAGCAGCGCCTTCCGTTCCTGCAGGATCTCG ACCAGGACAAGCGCGAGGAACTGCTGGTCGTCACCGCCACCGGCAACCCGGCGGGCGACCTTATGGATGTGTGGCGCGCT CGTCCCAACTCCGATCAATTCGATATGACCGGAACGATTTTCGGCGTTCCCCGATTCTGGATGACCTCCGATCGATTCAT CGGACTCTTCTCGCGCAACGGCAACGATGCCGGCGTGGCGGCGCTGTTCCGGTTCGTCGACAACAAGCTAGCCGTACTGG CGCTACTGGACACCGAAAGACGGGTCGACAACAAGCCACTCGATCCGAAGTGGCGCCTCAACGCCAACGTCAAATGCGCC ATGAACCTGTCCGATGATCCGCCGGGGGCACTGGGAGCACGCATGGACGCATTACGCGCGGCGGGTGTAGATCAGACGAA CGCCGAGGAGCACTTCTGCCTGCAGCCGTGGGTAGCCACCTTGTACCGGCAGGGCACGCGGTGA
Upstream 100 bases:
>100_bases GAGCGTACCGACGAATGCGGTAATCCCGCCGACCACAAATCCGTGCTCCCGTACCACGCGGCGCGTAGGGTCGGAACCAT TCGCTGGCGGAGGGGCAACG
Downstream 100 bases:
>100_bases GAAATCCATGAAAACCCGATACGCCGCAACTTTTTTCGCCGTAGGCATGGCACTGACGGCATGTAACCACGGCGGTATCC ACCGGACCGCCACCTCGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 527; Mature: 526
Protein sequence:
>527_residues MTRADKTTVRKAAHLAALLALTVAPAMSGCLDTSGSRELTPSQSTSSTAATPTRSYPALPPEYRGKFHPNHTDLGGRNNA ELASLLPTAADFPGPGETRAPDIASDDGSGLGMHGQTDGETRPPECLYAPFSKSFSRTPDGSDWNLYYAASTYHEAEPPG NHITVTVNRERENADVFALTADWIKKCGQYDRAFPAFAKPEVRNRHVTDTFGPGPTVDGVQTYVYTTASTDLDDTSADKQ PSGVRGQRIVLARVRSLVFEVAGTDQVDGGLLDQLLAITITNAKHAPPPPDQNAARLAGLPTCDTIAPQPMNGQPDPALD CTIHTSDGSGVVFEVLGTPAGTIRVFNGNGAQLQSIRVPNPIFQQRLPFLQDLDQDKREELLVVTATGNPAGDLMDVWRA RPNSDQFDMTGTIFGVPRFWMTSDRFIGLFSRNGNDAGVAALFRFVDNKLAVLALLDTERRVDNKPLDPKWRLNANVKCA MNLSDDPPGALGARMDALRAAGVDQTNAEEHFCLQPWVATLYRQGTR
Sequences:
>Translated_527_residues MTRADKTTVRKAAHLAALLALTVAPAMSGCLDTSGSRELTPSQSTSSTAATPTRSYPALPPEYRGKFHPNHTDLGGRNNA ELASLLPTAADFPGPGETRAPDIASDDGSGLGMHGQTDGETRPPECLYAPFSKSFSRTPDGSDWNLYYAASTYHEAEPPG NHITVTVNRERENADVFALTADWIKKCGQYDRAFPAFAKPEVRNRHVTDTFGPGPTVDGVQTYVYTTASTDLDDTSADKQ PSGVRGQRIVLARVRSLVFEVAGTDQVDGGLLDQLLAITITNAKHAPPPPDQNAARLAGLPTCDTIAPQPMNGQPDPALD CTIHTSDGSGVVFEVLGTPAGTIRVFNGNGAQLQSIRVPNPIFQQRLPFLQDLDQDKREELLVVTATGNPAGDLMDVWRA RPNSDQFDMTGTIFGVPRFWMTSDRFIGLFSRNGNDAGVAALFRFVDNKLAVLALLDTERRVDNKPLDPKWRLNANVKCA MNLSDDPPGALGARMDALRAAGVDQTNAEEHFCLQPWVATLYRQGTR >Mature_526_residues TRADKTTVRKAAHLAALLALTVAPAMSGCLDTSGSRELTPSQSTSSTAATPTRSYPALPPEYRGKFHPNHTDLGGRNNAE LASLLPTAADFPGPGETRAPDIASDDGSGLGMHGQTDGETRPPECLYAPFSKSFSRTPDGSDWNLYYAASTYHEAEPPGN HITVTVNRERENADVFALTADWIKKCGQYDRAFPAFAKPEVRNRHVTDTFGPGPTVDGVQTYVYTTASTDLDDTSADKQP SGVRGQRIVLARVRSLVFEVAGTDQVDGGLLDQLLAITITNAKHAPPPPDQNAARLAGLPTCDTIAPQPMNGQPDPALDC TIHTSDGSGVVFEVLGTPAGTIRVFNGNGAQLQSIRVPNPIFQQRLPFLQDLDQDKREELLVVTATGNPAGDLMDVWRAR PNSDQFDMTGTIFGVPRFWMTSDRFIGLFSRNGNDAGVAALFRFVDNKLAVLALLDTERRVDNKPLDPKWRLNANVKCAM NLSDDPPGALGARMDALRAAGVDQTNAEEHFCLQPWVATLYRQGTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56912; Mature: 56781
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRADKTTVRKAAHLAALLALTVAPAMSGCLDTSGSRELTPSQSTSSTAATPTRSYPALP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PEYRGKFHPNHTDLGGRNNAELASLLPTAADFPGPGETRAPDIASDDGSGLGMHGQTDGE HHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TRPPECLYAPFSKSFSRTPDGSDWNLYYAASTYHEAEPPGNHITVTVNRERENADVFALT CCCCCEEECCCHHCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEE ADWIKKCGQYDRAFPAFAKPEVRNRHVTDTFGPGPTVDGVQTYVYTTASTDLDDTSADKQ HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCC PSGVRGQRIVLARVRSLVFEVAGTDQVDGGLLDQLLAITITNAKHAPPPPDQNAARLAGL CCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEECCCCCCCCCCCCCHHHCCC PTCDTIAPQPMNGQPDPALDCTIHTSDGSGVVFEVLGTPAGTIRVFNGNGAQLQSIRVPN CCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEEECCC PIFQQRLPFLQDLDQDKREELLVVTATGNPAGDLMDVWRARPNSDQFDMTGTIFGVPRFW HHHHHCCCHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCE MTSDRFIGLFSRNGNDAGVAALFRFVDNKLAVLALLDTERRVDNKPLDPKWRLNANVKCA ECCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCHHHCCCCCCCCCEEECCCEEEE MNLSDDPPGALGARMDALRAAGVDQTNAEEHFCLQPWVATLYRQGTR EECCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHCCCC >Mature Secondary Structure TRADKTTVRKAAHLAALLALTVAPAMSGCLDTSGSRELTPSQSTSSTAATPTRSYPALP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PEYRGKFHPNHTDLGGRNNAELASLLPTAADFPGPGETRAPDIASDDGSGLGMHGQTDGE HHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TRPPECLYAPFSKSFSRTPDGSDWNLYYAASTYHEAEPPGNHITVTVNRERENADVFALT CCCCCEEECCCHHCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEE ADWIKKCGQYDRAFPAFAKPEVRNRHVTDTFGPGPTVDGVQTYVYTTASTDLDDTSADKQ HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCC PSGVRGQRIVLARVRSLVFEVAGTDQVDGGLLDQLLAITITNAKHAPPPPDQNAARLAGL CCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEECCCCCCCCCCCCCHHHCCC PTCDTIAPQPMNGQPDPALDCTIHTSDGSGVVFEVLGTPAGTIRVFNGNGAQLQSIRVPN CCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEEECCC PIFQQRLPFLQDLDQDKREELLVVTATGNPAGDLMDVWRARPNSDQFDMTGTIFGVPRFW HHHHHCCCHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCE MTSDRFIGLFSRNGNDAGVAALFRFVDNKLAVLALLDTERRVDNKPLDPKWRLNANVKCA ECCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCHHHCCCCCCCCCEEECCCEEEE MNLSDDPPGALGARMDALRAAGVDQTNAEEHFCLQPWVATLYRQGTR EECCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA