| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630871
Identifier: 169630871
GI number: 169630871
Start: 3848111
End: 3848914
Strand: Direct
Name: 169630871
Synonym: MAB_3791
Alternate gene names: NA
Gene position: 3848111-3848914 (Clockwise)
Preceding gene: 169630870
Following gene: 169630872
Centisome position: 75.94
GC content: 62.69
Gene sequence:
>804_bases ATGAAAACCCGATACGCCGCAACTTTTTTCGCCGTAGGCATGGCACTGACGGCATGTAACCACGGCGGTATCCACCGGAC CGCCACCTCGACGAGCCCCGCGCCAAGCCGCCTGGACTCACTGCCATCGTGCTTCTCGATCAAGCCGCAGGCCATCGAGC CCGATCCGGATCCCACGCTGGACTGTGTGTTGCGGTCGAATGATCCGGCCAAACTGACGTTCGAAGCGTTGGGCACGCCG CCCATCACCATCAAGGTGTATGAGCCCAATGGCATTATGCGCCAGAGCTTTACCGTCCCGGTTAACAAACCGGAGCGCAC CGCACCCTTGCTCGCCGACCTCGATAGAGATGGTCGCGACGAACTGATCGTCGTCAGTGACGTGGGTTCTGCCGGCGACA CCCTCGACATCTGGCGGGCACAGCAGGATTCGGGCCGGTTCGTCTCGGCAGGTCAGATGTCCGGTTATCCAGATTTCCGG ATAACCGACGAGCGCTTCACCGCGTTGTACGCCAGTACCGGTGCCGGATCGGGGCGTGTTTCCCTCTACCGATTTGTCGA CGACAAAGTGGTCGAGGTCGGCTCCCTCTTCGTACAGGCCGCCGACTGGCCGGATCCGCCCGATCCCGCCCGCATCTGGT ACACCAACGGAAACACGCTGTGCTCCTTCGATTACGACGACAGCCCACCTGGCCGCGCGGCCGCGCGCAATCAGGCGCTG ACCGATGCGGGCATCGATCCGCCGTCCGCGCAGGACAGATTTTGCCAGCAGACCTGGGTCGCCGACGTCTACCGGAAACG CTAG
Upstream 100 bases:
>100_bases TTACGCGCGGCGGGTGTAGATCAGACGAACGCCGAGGAGCACTTCTGCCTGCAGCCGTGGGTAGCCACCTTGTACCGGCA GGGCACGCGGTGAGAAATCC
Downstream 100 bases:
>100_bases CCACACGTACCGTGGTGGCATGCGCTTCTCGATCTCCATACCCCAGTTCGACACCGGCAGCTTCGACGGCGACGGCGTTC GCGACTATCTGGCGCGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MKTRYAATFFAVGMALTACNHGGIHRTATSTSPAPSRLDSLPSCFSIKPQAIEPDPDPTLDCVLRSNDPAKLTFEALGTP PITIKVYEPNGIMRQSFTVPVNKPERTAPLLADLDRDGRDELIVVSDVGSAGDTLDIWRAQQDSGRFVSAGQMSGYPDFR ITDERFTALYASTGAGSGRVSLYRFVDDKVVEVGSLFVQAADWPDPPDPARIWYTNGNTLCSFDYDDSPPGRAAARNQAL TDAGIDPPSAQDRFCQQTWVADVYRKR
Sequences:
>Translated_267_residues MKTRYAATFFAVGMALTACNHGGIHRTATSTSPAPSRLDSLPSCFSIKPQAIEPDPDPTLDCVLRSNDPAKLTFEALGTP PITIKVYEPNGIMRQSFTVPVNKPERTAPLLADLDRDGRDELIVVSDVGSAGDTLDIWRAQQDSGRFVSAGQMSGYPDFR ITDERFTALYASTGAGSGRVSLYRFVDDKVVEVGSLFVQAADWPDPPDPARIWYTNGNTLCSFDYDDSPPGRAAARNQAL TDAGIDPPSAQDRFCQQTWVADVYRKR >Mature_267_residues MKTRYAATFFAVGMALTACNHGGIHRTATSTSPAPSRLDSLPSCFSIKPQAIEPDPDPTLDCVLRSNDPAKLTFEALGTP PITIKVYEPNGIMRQSFTVPVNKPERTAPLLADLDRDGRDELIVVSDVGSAGDTLDIWRAQQDSGRFVSAGQMSGYPDFR ITDERFTALYASTGAGSGRVSLYRFVDDKVVEVGSLFVQAADWPDPPDPARIWYTNGNTLCSFDYDDSPPGRAAARNQAL TDAGIDPPSAQDRFCQQTWVADVYRKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29130; Mature: 29130
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTRYAATFFAVGMALTACNHGGIHRTATSTSPAPSRLDSLPSCFSIKPQAIEPDPDPTL CCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHCCCCHHCCCCCCCCCCCCCCE DCVLRSNDPAKLTFEALGTPPITIKVYEPNGIMRQSFTVPVNKPERTAPLLADLDRDGRD EEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCHHHHCCCCCCC ELIVVSDVGSAGDTLDIWRAQQDSGRFVSAGQMSGYPDFRITDERFTALYASTGAGSGRV CEEEEECCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCEEEHHHEEEEEEECCCCCCCE SLYRFVDDKVVEVGSLFVQAADWPDPPDPARIWYTNGNTLCSFDYDDSPPGRAAARNQAL EEEEECCHHHHHHHHEEEEECCCCCCCCCCEEEEECCCEEEEECCCCCCCCCHHHHCCCH TDAGIDPPSAQDRFCQQTWVADVYRKR HCCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKTRYAATFFAVGMALTACNHGGIHRTATSTSPAPSRLDSLPSCFSIKPQAIEPDPDPTL CCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHCCCCHHCCCCCCCCCCCCCCE DCVLRSNDPAKLTFEALGTPPITIKVYEPNGIMRQSFTVPVNKPERTAPLLADLDRDGRD EEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCHHHHCCCCCCC ELIVVSDVGSAGDTLDIWRAQQDSGRFVSAGQMSGYPDFRITDERFTALYASTGAGSGRV CEEEEECCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCEEEHHHEEEEEEECCCCCCCE SLYRFVDDKVVEVGSLFVQAADWPDPPDPARIWYTNGNTLCSFDYDDSPPGRAAARNQAL EEEEECCHHHHHHHHEEEEECCCCCCCCCCEEEEECCCEEEEECCCCCCCCCHHHHCCCH TDAGIDPPSAQDRFCQQTWVADVYRKR HCCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA