| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630837
Identifier: 169630837
GI number: 169630837
Start: 3815249
End: 3816688
Strand: Direct
Name: 169630837
Synonym: MAB_3758
Alternate gene names: NA
Gene position: 3815249-3816688 (Clockwise)
Preceding gene: 169630836
Following gene: 169630839
Centisome position: 75.29
GC content: 67.08
Gene sequence:
>1440_bases ATGAGCCTCGGCGTGGCCCGCCGTATCGCCACCGCTGGAGCCGTCGTGATGTTGGCGATGTCATCACAGCTGGCTACGGG CTCGATGCACGTAATGGCGACGGCACATGCCTTCGCACCGCTTCCGGTCGACCCGAGCATGCTTCCCGGCCCGCGTCCTC CCGCCCCGATCGAGCCCACCGAACAAAAGGAACTGTGCCGATTCCCTGGCATCGATCCCAAGCGCGACCTCAACAAGGTC CCCACACAGCAGCGCGGGCTCGACCTGCCGTTGGTCTGGCAGCTGTCGCGCGGCGCTGGTCAAACGGTCGCGGTGATCGA CACCGGTGTCGCACGCAGCCCGCGACTGCCACCCCTCATCCCGGGCGGTGACTACGTTTTCGAGGGCGGCAACGGCACTC AGGACTGTGACGCGCACGGCACGATCGTCGCCGGAATCATCGCGGCCGCGCCAGATCCCACCGGGGCGAGCGCTTTCAGC GGTATCGCGCCGGACGTCAGTCTCATCACCATCCGTCAGTCCAGCGCGAAATTCGCCGTGAAGAACAAGGGCGGGAACGA TCGCGACGATCCCTCCAAGATCAGCGGCGTCGGCAATGTGGACACCCTGGCGATGGCGGTGCGTACCGCCGCGGACATGG GCGCGACCGTCATCAACATCTCCGAGGTGGCCTGCGCGTCGGCCAAACAGTTCCTGGACGATCGGCCGCTGGGGGCCGCC CTGCAGTACGCCGTCGACGTCAAGAACGTCGTGGTGGTGGTGGCGGCAGGAAACGTTGGCGATGGACAGTGCAAGAGCCA GAATCCCCCGCCCGATCCGGCCCGGCCCAACACGCCGGATTGGGATTCCGTGCTGGAGACGGTCAGTCCGGCGTGGTATA ACGACCTGGTCCTCACGGTCGGCTCGATCGGGCCGGACGGGCAACCGTCCAAGTTCAGTCTCGGCGGCCCCTGGGTCGAC GTGTCCGCGCCCGGAGAAGACATCGTCTCGCTGGACCCCAACCGTGATGCGCTGACCAACGCCTACATGGGCGATCAGGG ACCGGTCCCCATCCAGGGCACCAGCTTTTCCGCGCCGGTGGTCAGTGGCGTTGTCGCGCTGGTACGTTCACGTTTCCCTC AGCTGAGTGCGCGCGAGGTGATGGATCGCATCAAGAACACGGCGCATCGCCCGCCCGGCGGCTGGGACCCGTACCTCGGG TTCGGCGTGGTGGACGCACTCGCGGCGGTCAGCGACGATCTCGGCACCACCAGCGACCTTGCCCGTGCCAACGCGGCCAA GAAGCTCGTACTGCCACCCGCTCCCCCACCACCGGACCCACGGCCCCGACGCGTCGCACTCATCGGAATAGCGGTCTGCG CAGCATTTCTCGCCGCCGCGCTGGCGATGTTGGCACCGGTGCGCAGGCTCCGGCAAAGCCGCGAACATCCCGACGAGTAA
Upstream 100 bases:
>100_bases GCACGGTGGAGATCATCGAATACATCGCGCTGTCCCTGATTGTTCCGATCGCCGTCTGGGTGTGCGGTGTGTACAGCGCC GTGCGGGGATTGAACCTGCC
Downstream 100 bases:
>100_bases CCACGGCTGGCGTTCTGAACGGCTGTCAGGACCGGGCTGTCAGGACGGCGCCTGGGTGGCCGATGTCGACGGATTGATCG CCAAACCGGTCTTGTCCGGG
Product: putative protease
Products: NA
Alternate protein names: Ak.1 protease [H]
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MSLGVARRIATAGAVVMLAMSSQLATGSMHVMATAHAFAPLPVDPSMLPGPRPPAPIEPTEQKELCRFPGIDPKRDLNKV PTQQRGLDLPLVWQLSRGAGQTVAVIDTGVARSPRLPPLIPGGDYVFEGGNGTQDCDAHGTIVAGIIAAAPDPTGASAFS GIAPDVSLITIRQSSAKFAVKNKGGNDRDDPSKISGVGNVDTLAMAVRTAADMGATVINISEVACASAKQFLDDRPLGAA LQYAVDVKNVVVVVAAGNVGDGQCKSQNPPPDPARPNTPDWDSVLETVSPAWYNDLVLTVGSIGPDGQPSKFSLGGPWVD VSAPGEDIVSLDPNRDALTNAYMGDQGPVPIQGTSFSAPVVSGVVALVRSRFPQLSAREVMDRIKNTAHRPPGGWDPYLG FGVVDALAAVSDDLGTTSDLARANAAKKLVLPPAPPPPDPRPRRVALIGIAVCAAFLAAALAMLAPVRRLRQSREHPDE
Sequences:
>Translated_479_residues MSLGVARRIATAGAVVMLAMSSQLATGSMHVMATAHAFAPLPVDPSMLPGPRPPAPIEPTEQKELCRFPGIDPKRDLNKV PTQQRGLDLPLVWQLSRGAGQTVAVIDTGVARSPRLPPLIPGGDYVFEGGNGTQDCDAHGTIVAGIIAAAPDPTGASAFS GIAPDVSLITIRQSSAKFAVKNKGGNDRDDPSKISGVGNVDTLAMAVRTAADMGATVINISEVACASAKQFLDDRPLGAA LQYAVDVKNVVVVVAAGNVGDGQCKSQNPPPDPARPNTPDWDSVLETVSPAWYNDLVLTVGSIGPDGQPSKFSLGGPWVD VSAPGEDIVSLDPNRDALTNAYMGDQGPVPIQGTSFSAPVVSGVVALVRSRFPQLSAREVMDRIKNTAHRPPGGWDPYLG FGVVDALAAVSDDLGTTSDLARANAAKKLVLPPAPPPPDPRPRRVALIGIAVCAAFLAAALAMLAPVRRLRQSREHPDE >Mature_478_residues SLGVARRIATAGAVVMLAMSSQLATGSMHVMATAHAFAPLPVDPSMLPGPRPPAPIEPTEQKELCRFPGIDPKRDLNKVP TQQRGLDLPLVWQLSRGAGQTVAVIDTGVARSPRLPPLIPGGDYVFEGGNGTQDCDAHGTIVAGIIAAAPDPTGASAFSG IAPDVSLITIRQSSAKFAVKNKGGNDRDDPSKISGVGNVDTLAMAVRTAADMGATVINISEVACASAKQFLDDRPLGAAL QYAVDVKNVVVVVAAGNVGDGQCKSQNPPPDPARPNTPDWDSVLETVSPAWYNDLVLTVGSIGPDGQPSKFSLGGPWVDV SAPGEDIVSLDPNRDALTNAYMGDQGPVPIQGTSFSAPVVSGVVALVRSRFPQLSAREVMDRIKNTAHRPPGGWDPYLGF GVVDALAAVSDDLGTTSDLARANAAKKLVLPPAPPPPDPRPRRVALIGIAVCAAFLAAALAMLAPVRRLRQSREHPDE
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 49739; Mature: 49608
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLGVARRIATAGAVVMLAMSSQLATGSMHVMATAHAFAPLPVDPSMLPGPRPPAPIEPT CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCC EQKELCRFPGIDPKRDLNKVPTQQRGLDLPLVWQLSRGAGQTVAVIDTGVARSPRLPPLI CHHHHHHCCCCCCHHHHHHCCCHHHCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCC PGGDYVFEGGNGTQDCDAHGTIVAGIIAAAPDPTGASAFSGIAPDVSLITIRQSSAKFAV CCCCEEEECCCCCCCCCCCCCEEEHHHHCCCCCCCCHHHCCCCCCCEEEEEECCCCEEEE KNKGGNDRDDPSKISGVGNVDTLAMAVRTAADMGATVINISEVACASAKQFLDDRPLGAA ECCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCHHHH LQYAVDVKNVVVVVAAGNVGDGQCKSQNPPPDPARPNTPDWDSVLETVSPAWYNDLVLTV HHHHEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHCCEEEEE GSIGPDGQPSKFSLGGPWVDVSAPGEDIVSLDPNRDALTNAYMGDQGPVPIQGTSFSAPV ECCCCCCCCCEEECCCCEEECCCCCCCCEEECCCCHHHHHHHCCCCCCCCCCCCCCCHHH VSGVVALVRSRFPQLSAREVMDRIKNTAHRPPGGWDPYLGFGVVDALAAVSDDLGTTSDL HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH ARANAAKKLVLPPAPPPPDPRPRRVALIGIAVCAAFLAAALAMLAPVRRLRQSREHPDE HHHHCCCEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SLGVARRIATAGAVVMLAMSSQLATGSMHVMATAHAFAPLPVDPSMLPGPRPPAPIEPT CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCC EQKELCRFPGIDPKRDLNKVPTQQRGLDLPLVWQLSRGAGQTVAVIDTGVARSPRLPPLI CHHHHHHCCCCCCHHHHHHCCCHHHCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCC PGGDYVFEGGNGTQDCDAHGTIVAGIIAAAPDPTGASAFSGIAPDVSLITIRQSSAKFAV CCCCEEEECCCCCCCCCCCCCEEEHHHHCCCCCCCCHHHCCCCCCCEEEEEECCCCEEEE KNKGGNDRDDPSKISGVGNVDTLAMAVRTAADMGATVINISEVACASAKQFLDDRPLGAA ECCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCHHHH LQYAVDVKNVVVVVAAGNVGDGQCKSQNPPPDPARPNTPDWDSVLETVSPAWYNDLVLTV HHHHEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHCCEEEEE GSIGPDGQPSKFSLGGPWVDVSAPGEDIVSLDPNRDALTNAYMGDQGPVPIQGTSFSAPV ECCCCCCCCCEEECCCCEEECCCCCCCCEEECCCCHHHHHHHCCCCCCCCCCCCCCCHHH VSGVVALVRSRFPQLSAREVMDRIKNTAHRPPGGWDPYLGFGVVDALAAVSDDLGTTSDL HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH ARANAAKKLVLPPAPPPPDPRPRRVALIGIAVCAAFLAAALAMLAPVRRLRQSREHPDE HHHHCCCEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7993087; 10588904 [H]