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The map label for this gene is cdd [H]

Identifier: 169630751

GI number: 169630751

Start: 3725364

End: 3725762

Strand: Reverse

Name: cdd [H]

Synonym: MAB_3672c

Alternate gene names: 169630751

Gene position: 3725762-3725364 (Counterclockwise)

Preceding gene: 169630757

Following gene: 169630750

Centisome position: 73.53

GC content: 62.91

Gene sequence:

>399_bases
GTGAAAATCGAATGGAATGAATTGCGGGACAAGGCATATGCCGTGACCAAGCACGCATACGCGCCGTATTCGAAGTATCC
GGTGGGTGCCGCGGCGCTCGTCGACGACGGCCGGGTGATCTCCGGCTGCAATGTGGAGAATGTCTCATATGGGCTAGGTC
TCTGTGCGGAGTGTTCTGTGGTGTGTGCCCTGTTCTCCAGCGGGGGCGGGCGGTTGATGGCGCTCTCCTGCGTTGATTCC
CGCGGTGAGCCGCTGATGCCCTGCGGCCGGTGTCGTCAGCTACTTCTCGAGCATGGTGGTCCGGACCTGCTGATCGACCA
TGCTGATGGTCCGCGACGCCTGGCGCAGCTGCTACCGGATGCCTTCGGGCCCGACGACTTGGACCGGGGGCGCATCTGA

Upstream 100 bases:

>100_bases
CCGAAATGCACCGTACTCCAAAGTAAGTTAGGTAAACCTTGCACGAGCAAATGATGAGCCGATGCGACTCTCGTGGGGTC
GACAGGGAGGTCTCCGGGTC

Downstream 100 bases:

>100_bases
TGGCAAATACATATGCCTTCGATATGCCGTCGATCATCGCCACCAAGCGGGACGGCGCGGAGCTGAGCCCGGCCGCCATC
GATTGGCTGATTGGCCAGTA

Product: cytidine deaminase Cdd

Products: NA

Alternate protein names: CDA; Cytidine aminohydrolase [H]

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MKIEWNELRDKAYAVTKHAYAPYSKYPVGAAALVDDGRVISGCNVENVSYGLGLCAECSVVCALFSSGGGRLMALSCVDS
RGEPLMPCGRCRQLLLEHGGPDLLIDHADGPRRLAQLLPDAFGPDDLDRGRI

Sequences:

>Translated_132_residues
MKIEWNELRDKAYAVTKHAYAPYSKYPVGAAALVDDGRVISGCNVENVSYGLGLCAECSVVCALFSSGGGRLMALSCVDS
RGEPLMPCGRCRQLLLEHGGPDLLIDHADGPRRLAQLLPDAFGPDDLDRGRI
>Mature_132_residues
MKIEWNELRDKAYAVTKHAYAPYSKYPVGAAALVDDGRVISGCNVENVSYGLGLCAECSVVCALFSSGGGRLMALSCVDS
RGEPLMPCGRCRQLLLEHGGPDLLIDHADGPRRLAQLLPDAFGPDDLDRGRI

Specific function: This enzyme scavenge exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis [H]

COG id: COG0295

COG function: function code F; Cytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Homo sapiens, GI11386157, Length=120, Percent_Identity=39.1666666666667, Blast_Score=90, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17540514, Length=126, Percent_Identity=43.6507936507937, Blast_Score=106, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17551074, Length=127, Percent_Identity=36.2204724409449, Blast_Score=87, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6323274, Length=130, Percent_Identity=33.8461538461538, Blast_Score=72, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24582744, Length=106, Percent_Identity=39.622641509434, Blast_Score=70, Evalue=3e-13,
Organism=Drosophila melanogaster, GI19920920, Length=104, Percent_Identity=37.5, Blast_Score=70, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24582741, Length=118, Percent_Identity=37.2881355932203, Blast_Score=69, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002125
- InterPro:   IPR006262
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: =3.5.4.5 [H]

Molecular weight: Translated: 14178; Mature: 14178

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIEWNELRDKAYAVTKHAYAPYSKYPVGAAALVDDGRVISGCNVENVSYGLGLCAECSV
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEECCCCCCCCCCCCCHHHHHHH
VCALFSSGGGRLMALSCVDSRGEPLMPCGRCRQLLLEHGGPDLLIDHADGPRRLAQLLPD
HHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHCCC
AFGPDDLDRGRI
CCCCCCCCCCCC
>Mature Secondary Structure
MKIEWNELRDKAYAVTKHAYAPYSKYPVGAAALVDDGRVISGCNVENVSYGLGLCAECSV
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEECCCCCCCCCCCCCHHHHHHH
VCALFSSGGGRLMALSCVDSRGEPLMPCGRCRQLLLEHGGPDLLIDHADGPRRLAQLLPD
HHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHCCC
AFGPDDLDRGRI
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11739901 [H]