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The map label for this gene is 169630757

Identifier: 169630757

GI number: 169630757

Start: 3730190

End: 3731098

Strand: Reverse

Name: 169630757

Synonym: MAB_3678c

Alternate gene names: NA

Gene position: 3731098-3730190 (Counterclockwise)

Preceding gene: 169630758

Following gene: 169630751

Centisome position: 73.63

GC content: 65.79

Gene sequence:

>909_bases
ATGGTGGTTCGAGCAGGCGATCGCACCGATGAGTTCGAGGCGTTGCGCCCGCGACTGCAGGCGGTGGCCTACCGGCTCAC
CGGCAGTGTCGCCGACGCCGAAGACATCGTGCAGGATGCCTGGTTGCGCCTGTATTCCACGACCGCGGAGATCGAGGACT
TGGCGGCTTGGTTGACCACGGTGGTCTCTCGGCTCGGCTTGGATCGGCTGAGATCGGCCGTCTACCGCAGAGAAACCTAT
GTGGGGGAATGGCTTCCGGAGCCGGTGGTCACCGGCCTGGACGGCGATGATCCCCTGGCGGCGTTGGTGGCCAGCGAGGA
CGCGCGTTTCGCTGCCATGGTGGTGCTGGATCGGCTAGCACCCGATCAGCGGGTCGCCTTCGTTCTGCATGACGGATTTT
CGGTACCGTTCAAGCAGATTGCCGACATCCTCGGCATCAGCGATGCGGCTGCGCGTCAGCTGGCCTCGCGTGCGCGGCGC
ATGGTGACCGCCACCCCTGAGCCGGTGGCCGATGCCGAACACAACGAGGTGGTGGGCGAGCTGCTGGAGGCCCTCATGTC
CGGGAGTGTGGAAGCCGTTGTGCGGCTGCTGCATCCGGATGTGACGATGACGGGTGATTCCGACGGCAAGGCTCCGACCG
CGGTGCGCGTGATACACGGCCCCGACAAGGTGGCGCGTTTCCTGCTCGGGCTGATGGAGCGCTACGGCCCACAGATGACG
CAGGCGATCAACCCGGCGTTGGTGAACGGGCAGTTCGGCATGTACCTGACCGAGACAGACACCGATCCGAATTTCAGACC
GGTGCTGCCCCGGGTGAGCGCGTTCACCGTGCGCGACGGGCGGGTGCTGGCGGTCTGGGATGTGAGCAATCCCGACAAGT
TCTCCGGCACTCCGCTGCGTGAGGCCTAG

Upstream 100 bases:

>100_bases
CCGAGCCAGACAATGGAAACGTTTCCCGTTCCGGCACCGGGCGTCGCCTATTGCTTGAGCGATCCCAATCCGTAATCACG
GCAAGGCCTAGGCTGAAGCC

Downstream 100 bases:

>100_bases
GTGCCCATCGGGTCAGGGGAGGCGGCCCAGGGAACCCGGCAGGCATCACCGGAGTTGAAGCCCTGCTCGGTAATTCCCAA
TGCTGCGTAGGTGCGGGCGC

Product: RNA polymerase sigma factor SigJ

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma Factor SigJ; RNA Polymerase ECF-Subfamily Sigma Factor; ECF Subfamily RNA Polymerase Sigma-24 Factor; Sigma Factor; RNA Polymerase Sigma-70 Factor ECF Subfamily; RNA Polymerase Sigma Factor; ECF Subfamily RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70 Factor; Sigma-; ECF-Sigma Factor; ECF Family RNA Polymerase Sigma Factor; RNA Polymerase Sigma Factor Sigma-70 Family; RNA Polymerase; RNA Polymerase ECF-Type Sigma Factor; ECF-Family RNA Polymerase Sigma Factor; AlteRNAtive RNA Polymerase Sigma Factor; Sigma-70 Family RNA Polymerase; Sigma Factor Sigma; AlteRNAtive RNA Polymerase Sigma Factor SigJ; RNA Polymerase Sigma Factor Sigma-70 Family Protein; Sigma-70 Factor; RNA Polymerase Sigma-24 Factor Protein; ECF-Family Protein RNA Polymerase Sigma Factor; RNA Polymerase Sigma Subunit ECF Family; RNA Polymerase Sigma-24 Subunit; AlteRNAtive RNA Polymerase Sigma Factor SigJ-Like Protein; RNA Polymerase Sigma-70 Factor Family; RNA Polymerase ECF-Type Sigma Factor SigJ; RNA Polymerase Sigma-24 Factor; ECF-Type Sigma Factor; RNA Polymerase Sigma-70 ECF Type; Sigma-70 Region 2 Domain-Containing Protein; RNA Polymerase Sigma-70 Factor Protein; RNA Polymerase Sigma Factor Protein; DNA-Directed RNA Polymeracialized Sigma Subunit

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MVVRAGDRTDEFEALRPRLQAVAYRLTGSVADAEDIVQDAWLRLYSTTAEIEDLAAWLTTVVSRLGLDRLRSAVYRRETY
VGEWLPEPVVTGLDGDDPLAALVASEDARFAAMVVLDRLAPDQRVAFVLHDGFSVPFKQIADILGISDAAARQLASRARR
MVTATPEPVADAEHNEVVGELLEALMSGSVEAVVRLLHPDVTMTGDSDGKAPTAVRVIHGPDKVARFLLGLMERYGPQMT
QAINPALVNGQFGMYLTETDTDPNFRPVLPRVSAFTVRDGRVLAVWDVSNPDKFSGTPLREA

Sequences:

>Translated_302_residues
MVVRAGDRTDEFEALRPRLQAVAYRLTGSVADAEDIVQDAWLRLYSTTAEIEDLAAWLTTVVSRLGLDRLRSAVYRRETY
VGEWLPEPVVTGLDGDDPLAALVASEDARFAAMVVLDRLAPDQRVAFVLHDGFSVPFKQIADILGISDAAARQLASRARR
MVTATPEPVADAEHNEVVGELLEALMSGSVEAVVRLLHPDVTMTGDSDGKAPTAVRVIHGPDKVARFLLGLMERYGPQMT
QAINPALVNGQFGMYLTETDTDPNFRPVLPRVSAFTVRDGRVLAVWDVSNPDKFSGTPLREA
>Mature_302_residues
MVVRAGDRTDEFEALRPRLQAVAYRLTGSVADAEDIVQDAWLRLYSTTAEIEDLAAWLTTVVSRLGLDRLRSAVYRRETY
VGEWLPEPVVTGLDGDDPLAALVASEDARFAAMVVLDRLAPDQRVAFVLHDGFSVPFKQIADILGISDAAARQLASRARR
MVTATPEPVADAEHNEVVGELLEALMSGSVEAVVRLLHPDVTMTGDSDGKAPTAVRVIHGPDKVARFLLGLMERYGPQMT
QAINPALVNGQFGMYLTETDTDPNFRPVLPRVSAFTVRDGRVLAVWDVSNPDKFSGTPLREA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33010; Mature: 33010

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVRAGDRTDEFEALRPRLQAVAYRLTGSVADAEDIVQDAWLRLYSTTAEIEDLAAWLTT
CEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVSRLGLDRLRSAVYRRETYVGEWLPEPVVTGLDGDDPLAALVASEDARFAAMVVLDRLA
HHHHHCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHCC
PDQRVAFVLHDGFSVPFKQIADILGISDAAARQLASRARRMVTATPEPVADAEHNEVVGE
CCCEEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
LLEALMSGSVEAVVRLLHPDVTMTGDSDGKAPTAVRVIHGPDKVARFLLGLMERYGPQMT
HHHHHHCCCHHHHHHHHCCCEEEECCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCHHH
QAINPALVNGQFGMYLTETDTDPNFRPVLPRVSAFTVRDGRVLAVWDVSNPDKFSGTPLR
HHCCCCEECCCCCEEEEECCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCC
EA
CC
>Mature Secondary Structure
MVVRAGDRTDEFEALRPRLQAVAYRLTGSVADAEDIVQDAWLRLYSTTAEIEDLAAWLTT
CEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVSRLGLDRLRSAVYRRETYVGEWLPEPVVTGLDGDDPLAALVASEDARFAAMVVLDRLA
HHHHHCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHCC
PDQRVAFVLHDGFSVPFKQIADILGISDAAARQLASRARRMVTATPEPVADAEHNEVVGE
CCCEEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
LLEALMSGSVEAVVRLLHPDVTMTGDSDGKAPTAVRVIHGPDKVARFLLGLMERYGPQMT
HHHHHHCCCHHHHHHHHCCCEEEECCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCHHH
QAINPALVNGQFGMYLTETDTDPNFRPVLPRVSAFTVRDGRVLAVWDVSNPDKFSGTPLR
HHCCCCEECCCCCEEEEECCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCC
EA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA