| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630644
Identifier: 169630644
GI number: 169630644
Start: 3608815
End: 3610008
Strand: Reverse
Name: 169630644
Synonym: MAB_3564c
Alternate gene names: NA
Gene position: 3610008-3608815 (Counterclockwise)
Preceding gene: 169630646
Following gene: 169630643
Centisome position: 71.24
GC content: 62.98
Gene sequence:
>1194_bases ATGCGATTCATCTTCGAGACCGACGAGTCGTTCTCGTTCGAGACATTGCGGACGGTCGGCTACACGGCCTACGGCGGGGC CGATATCGGCGAGGTTGTCACTACTGCGAAGCGGATCACGCCGGGCGATTGGGAGTCGTGGTACATCGAGTGGCGCGCGT TGGCCGACCGGATCGCGGCGATAGCGGCGAAATGTGCGGCGGCCGGGCACGCGGTGAGCGCCAGCACGGCCTATCTGCGT GCGTCCAACTACTACCGAACGGCCGAGTTCTTTCTTCGCGACGATCCGGGCAATGATCCCCGTGTGCTGGACACTTCGGC GCGCGCCGTCGAGACGTTCCGCAGTGCGCCGGAGATACAGGCGCGGTGGGAGCGGGTCCAGATTCCCTATGAAGGAATCC AATTGGAGGGCTATTACCTCAACGCAAGCGGGGACGATCGCGGGCCGACCTTGCTCGCGCACGGCGGATTCGATTCGACC GTCGAGGAGATGTACTTCGCGGTGGGGGAGGCGGCGCGTCGGTACGGCTGGAACTGCCTGATTTTTGAAGGGCCTGGGCA GGGCGCCGCGCTGCGTGCCGACAAGGTCACGTTCCGTTATGACTGGGAGGCCGTGGTCACCCCGGTGCTGGATTTCGCCC TCGGCCTGCCGGGAGTCGACCCCGACCGAGTCGCGTTGTTGGGGATGAGTATGGGCGGATATCTGGCTCCCCGCGCCGCT GCTTTCGAGCCCAGGCTCGCGGCATGTGTTGCATATGACAGCGTGTTCAAACTGTCGGCGGGCATGCCCAAGACGCATGA TGACGAGCACAAGCTGGATTCAGCTCAGCGAGTCGCCGCGGTGGGCAATTTGATTGCCCATCGGGCAGAGGCTCCGAGCT CGCAGCGATGGGTGCTCTCAAATGCGTTGTGGGTGTTTGGGGTCGACTCCGCGCAGTCGCTGCTCGACGAGGTTGAGAAG TATGACCTGTCCGATGTCGCACATCAGATTTCGTGCCCCACGCTGGTGTGTGAGGCGGAGAACGATCAGTTCTTTCATGG TCAGCCTTCGATGCTCTACGACGCCCTGCAATGCCCCAAGACCTATCTGAAGTTCACCGAGGCCGAGGGCGCCGGCGAAC ACTGCCATGAGGGGGCCTTGCTGCTGTTTCATCAACGCATGTTCGACTGGCTCGACGACGCCGTCGGTGCCTGA
Upstream 100 bases:
>100_bases GCCGATTTGCCATTAATCGCCTCCATGAGTTGCGTTAGTGATCCCGGTGTGCAACTCTCAGCTTATGGCAACTACCCGTT GCGATAACAGGGAGGGTGGC
Downstream 100 bases:
>100_bases CCATGCGTGATCTGGAATCTCGCCGAAAGATATTGCCATGAAGGTATTTTCGTTCCTGAATCCCTTGGCGAGGGTCGGAT GAGCCGCCGCTCTGTCGTAC
Product: dipeptidyl aminopeptidase/ acylaminoacyl-peptidase related protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MRFIFETDESFSFETLRTVGYTAYGGADIGEVVTTAKRITPGDWESWYIEWRALADRIAAIAAKCAAAGHAVSASTAYLR ASNYYRTAEFFLRDDPGNDPRVLDTSARAVETFRSAPEIQARWERVQIPYEGIQLEGYYLNASGDDRGPTLLAHGGFDST VEEMYFAVGEAARRYGWNCLIFEGPGQGAALRADKVTFRYDWEAVVTPVLDFALGLPGVDPDRVALLGMSMGGYLAPRAA AFEPRLAACVAYDSVFKLSAGMPKTHDDEHKLDSAQRVAAVGNLIAHRAEAPSSQRWVLSNALWVFGVDSAQSLLDEVEK YDLSDVAHQISCPTLVCEAENDQFFHGQPSMLYDALQCPKTYLKFTEAEGAGEHCHEGALLLFHQRMFDWLDDAVGA
Sequences:
>Translated_397_residues MRFIFETDESFSFETLRTVGYTAYGGADIGEVVTTAKRITPGDWESWYIEWRALADRIAAIAAKCAAAGHAVSASTAYLR ASNYYRTAEFFLRDDPGNDPRVLDTSARAVETFRSAPEIQARWERVQIPYEGIQLEGYYLNASGDDRGPTLLAHGGFDST VEEMYFAVGEAARRYGWNCLIFEGPGQGAALRADKVTFRYDWEAVVTPVLDFALGLPGVDPDRVALLGMSMGGYLAPRAA AFEPRLAACVAYDSVFKLSAGMPKTHDDEHKLDSAQRVAAVGNLIAHRAEAPSSQRWVLSNALWVFGVDSAQSLLDEVEK YDLSDVAHQISCPTLVCEAENDQFFHGQPSMLYDALQCPKTYLKFTEAEGAGEHCHEGALLLFHQRMFDWLDDAVGA >Mature_397_residues MRFIFETDESFSFETLRTVGYTAYGGADIGEVVTTAKRITPGDWESWYIEWRALADRIAAIAAKCAAAGHAVSASTAYLR ASNYYRTAEFFLRDDPGNDPRVLDTSARAVETFRSAPEIQARWERVQIPYEGIQLEGYYLNASGDDRGPTLLAHGGFDST VEEMYFAVGEAARRYGWNCLIFEGPGQGAALRADKVTFRYDWEAVVTPVLDFALGLPGVDPDRVALLGMSMGGYLAPRAA AFEPRLAACVAYDSVFKLSAGMPKTHDDEHKLDSAQRVAAVGNLIAHRAEAPSSQRWVLSNALWVFGVDSAQSLLDEVEK YDLSDVAHQISCPTLVCEAENDQFFHGQPSMLYDALQCPKTYLKFTEAEGAGEHCHEGALLLFHQRMFDWLDDAVGA
Specific function: L-nicotine is used as a growth substrate. Plays a role in nicotine catabolism by cleaving a C-C bond in 2,6- dihydroxypseudooxyicotine [H]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0255 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010520 [H]
Pfam domain/function: PF06500 DUF1100 [H]
EC number: NA
Molecular weight: Translated: 43790; Mature: 43790
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFIFETDESFSFETLRTVGYTAYGGADIGEVVTTAKRITPGDWESWYIEWRALADRIAA CCEEEECCCCCCHHHHHHHCEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH IAAKCAAAGHAVSASTAYLRASNYYRTAEFFLRDDPGNDPRVLDTSARAVETFRSAPEIQ HHHHHHHCCCCCCCCHHEEECCCCEEEEEEEEECCCCCCCCEECCHHHHHHHHHCCCCHH ARWERVQIPYEGIQLEGYYLNASGDDRGPTLLAHGGFDSTVEEMYFAVGEAARRYGWNCL HHHHEEECCCCCEEEEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEE IFEGPGQGAALRADKVTFRYDWEAVVTPVLDFALGLPGVDPDRVALLGMSMGGYLAPRAA EEECCCCCCEEEECEEEEEECHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCC AFEPRLAACVAYDSVFKLSAGMPKTHDDEHKLDSAQRVAAVGNLIAHRAEAPSSQRWVLS CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE NALWVFGVDSAQSLLDEVEKYDLSDVAHQISCPTLVCEAENDQFFHGQPSMLYDALQCPK CCEEEEECCHHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCCCEECCCHHHHHHHHHCCH TYLKFTEAEGAGEHCHEGALLLFHQRMFDWLDDAVGA HHHEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRFIFETDESFSFETLRTVGYTAYGGADIGEVVTTAKRITPGDWESWYIEWRALADRIAA CCEEEECCCCCCHHHHHHHCEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH IAAKCAAAGHAVSASTAYLRASNYYRTAEFFLRDDPGNDPRVLDTSARAVETFRSAPEIQ HHHHHHHCCCCCCCCHHEEECCCCEEEEEEEEECCCCCCCCEECCHHHHHHHHHCCCCHH ARWERVQIPYEGIQLEGYYLNASGDDRGPTLLAHGGFDSTVEEMYFAVGEAARRYGWNCL HHHHEEECCCCCEEEEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEE IFEGPGQGAALRADKVTFRYDWEAVVTPVLDFALGLPGVDPDRVALLGMSMGGYLAPRAA EEECCCCCCEEEECEEEEEECHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCC AFEPRLAACVAYDSVFKLSAGMPKTHDDEHKLDSAQRVAAVGNLIAHRAEAPSSQRWVLS CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE NALWVFGVDSAQSLLDEVEKYDLSDVAHQISCPTLVCEAENDQFFHGQPSMLYDALQCPK CCEEEEECCHHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCCCEECCCHHHHHHHHHCCH TYLKFTEAEGAGEHCHEGALLLFHQRMFDWLDDAVGA HHHEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11514508; 12618462 [H]