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The map label for this gene is 169630643

Identifier: 169630643

GI number: 169630643

Start: 3608296

End: 3608736

Strand: Reverse

Name: 169630643

Synonym: MAB_3563c

Alternate gene names: NA

Gene position: 3608736-3608296 (Counterclockwise)

Preceding gene: 169630644

Following gene: 169630642

Centisome position: 71.22

GC content: 62.81

Gene sequence:

>441_bases
ATGAGCCGCCGCTCTGTCGTACGGCCTATCCTGGCGCGGGCCTGGATGCCGCTGGTGTCTATCGTCGCGGTCAGCGTCGG
TGCGGTCGCGATGTGGAAGGTGCACGACTCATCCTCCCCGCCGCCGGTGTTCACCGTCAACGGACCCCAGGCGCCAGACA
GCTTCACGCAAAAGCGACTCACCTACCAGGTTTTCGGCACCGGCAGTGGGGCAATGCTTTCCTACGTGGACGTCTACGGG
CACCCGCACCAGGCTGACGGCGCCGATCTGCCTTGGTCGCACACAGAGACGACGACGCTCACCGTCGTCTCGGGGAGCAT
CTCGGTGCAAGTTCGTGGCGGTGAGGTCGGTTGCCGAATCTTGGTCAATGACGTTGTCCGAGATGAGAAGTTCGACGATC
ATCACGACGCTGACGTCACGTGCAGGGTCAAGTCGGTATGA

Upstream 100 bases:

>100_bases
CGACGACGCCGTCGGTGCCTGACCATGCGTGATCTGGAATCTCGCCGAAAGATATTGCCATGAAGGTATTTTCGTTCCTG
AATCCCTTGGCGAGGGTCGG

Downstream 100 bases:

>100_bases
GTAACCACGAGATGCCCACGGGCCCGATACCGGTCAGGCGTCCGTTGGTTCCGCGCATGGTCCGCGTCCTTGCGGTGCCG
ATCATCGTCTTCTGGGCGTT

Product: MmpS family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MSRRSVVRPILARAWMPLVSIVAVSVGAVAMWKVHDSSSPPPVFTVNGPQAPDSFTQKRLTYQVFGTGSGAMLSYVDVYG
HPHQADGADLPWSHTETTTLTVVSGSISVQVRGGEVGCRILVNDVVRDEKFDDHHDADVTCRVKSV

Sequences:

>Translated_146_residues
MSRRSVVRPILARAWMPLVSIVAVSVGAVAMWKVHDSSSPPPVFTVNGPQAPDSFTQKRLTYQVFGTGSGAMLSYVDVYG
HPHQADGADLPWSHTETTTLTVVSGSISVQVRGGEVGCRILVNDVVRDEKFDDHHDADVTCRVKSV
>Mature_145_residues
SRRSVVRPILARAWMPLVSIVAVSVGAVAMWKVHDSSSPPPVFTVNGPQAPDSFTQKRLTYQVFGTGSGAMLSYVDVYGH
PHQADGADLPWSHTETTTLTVVSGSISVQVRGGEVGCRILVNDVVRDEKFDDHHDADVTCRVKSV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008693 [H]

Pfam domain/function: PF05423 Mycobact_memb [H]

EC number: NA

Molecular weight: Translated: 15803; Mature: 15672

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRSVVRPILARAWMPLVSIVAVSVGAVAMWKVHDSSSPPPVFTVNGPQAPDSFTQKRL
CCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCEEEECCCCCCCCHHHHEE
TYQVFGTGSGAMLSYVDVYGHPHQADGADLPWSHTETTTLTVVSGSISVQVRGGEVGCRI
EEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECEEEEEEECCCCEEEE
LVNDVVRDEKFDDHHDADVTCRVKSV
EEEHHHCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure 
SRRSVVRPILARAWMPLVSIVAVSVGAVAMWKVHDSSSPPPVFTVNGPQAPDSFTQKRL
CCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCEEEECCCCCCCCHHHHEE
TYQVFGTGSGAMLSYVDVYGHPHQADGADLPWSHTETTTLTVVSGSISVQVRGGEVGCRI
EEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECEEEEEEECCCCEEEE
LVNDVVRDEKFDDHHDADVTCRVKSV
EEEHHHCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]