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The map label for this gene is mmpS3 [H]

Identifier: 169630610

GI number: 169630610

Start: 3575846

End: 3576580

Strand: Direct

Name: mmpS3 [H]

Synonym: MAB_3529

Alternate gene names: 169630610

Gene position: 3575846-3576580 (Clockwise)

Preceding gene: 169630608

Following gene: 169630612

Centisome position: 70.57

GC content: 67.48

Gene sequence:

>735_bases
ATGGTCGGTTATCGCGGAGATTCTCGGTACTCGAGCGACTACGAGCCCTACGACGACCCGTACAACTCCGAGACTGCCCC
GCAGTCCACCGAGTACTCGGGTCTTGACGAGGACTTCGAGTACCGGCCGCCGGGCTCCAACGAGAACTGGAAATGGGTCG
CGTCGATAGCCGGGGCGGTGTTCGCCATCGCCGTGATCGCGACGGCCGTTGTGCTCAGCGGCGGCAACGACAAGCCGCCA
GCTGCTGCGGTGACCACGCCCGTGCCCGCGCTGACACCCGTCACCACCACCACCGCGCCTCCACCACCCCCGTCGGCGAC
GTCTCCGGCCAAACCGTCGACAACCACCGTGACGAGCACGCCCGCGCAAGAGACGCCGACCGCGGAGCCCTCCACCGAGG
CTCCCCCGCCCGAGCCGCCACCGTCGAACCCGATGCTGCCGCCGGAGGGCCAGCGGCCGATCACGCCGGCGGCATTCGCC
TACTACGTGACCGGTAACCAAACGCCGGGCGATCTGCTGACCATCACCTACACCGACGGCAACGGCATGACACGCACCGT
GCTCGGCGCCTCGCTGCCGTGGACGATGATCGTGACCCCGAGCCCCGGGATCACCGGCGGCTCGATCACCGCGACGAGCT
TTGCAAGCCAGGTCAACTGCTCGATCACCAACAGCGAGAACCAGATGCTCGCGGTGCAGAACAGCAACAGCATCATCGCC
CGCTGCGCCAAGTAG

Upstream 100 bases:

>100_bases
GCGCCGACACACCTCGCATGATCGCGGGCGCCCGTTAATCACAGCAGTAACATCGGCATCAGGTTTCACATTGAATTGGG
GCTGAGAGGAAGCGCTGATC

Downstream 100 bases:

>100_bases
CTGCCGCCTGCGCGTTCCCCACAGGTAACCGGTACACAGACTCAATCGGCTGATTCTGTTGTCCCACAATCGGTATGGCT
AGCGACATGGGGAATACCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MVGYRGDSRYSSDYEPYDDPYNSETAPQSTEYSGLDEDFEYRPPGSNENWKWVASIAGAVFAIAVIATAVVLSGGNDKPP
AAAVTTPVPALTPVTTTTAPPPPPSATSPAKPSTTTVTSTPAQETPTAEPSTEAPPPEPPPSNPMLPPEGQRPITPAAFA
YYVTGNQTPGDLLTITYTDGNGMTRTVLGASLPWTMIVTPSPGITGGSITATSFASQVNCSITNSENQMLAVQNSNSIIA
RCAK

Sequences:

>Translated_244_residues
MVGYRGDSRYSSDYEPYDDPYNSETAPQSTEYSGLDEDFEYRPPGSNENWKWVASIAGAVFAIAVIATAVVLSGGNDKPP
AAAVTTPVPALTPVTTTTAPPPPPSATSPAKPSTTTVTSTPAQETPTAEPSTEAPPPEPPPSNPMLPPEGQRPITPAAFA
YYVTGNQTPGDLLTITYTDGNGMTRTVLGASLPWTMIVTPSPGITGGSITATSFASQVNCSITNSENQMLAVQNSNSIIA
RCAK
>Mature_244_residues
MVGYRGDSRYSSDYEPYDDPYNSETAPQSTEYSGLDEDFEYRPPGSNENWKWVASIAGAVFAIAVIATAVVLSGGNDKPP
AAAVTTPVPALTPVTTTTAPPPPPSATSPAKPSTTTVTSTPAQETPTAEPSTEAPPPEPPPSNPMLPPEGQRPITPAAFA
YYVTGNQTPGDLLTITYTDGNGMTRTVLGASLPWTMIVTPSPGITGGSITATSFASQVNCSITNSENQMLAVQNSNSIIA
RCAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008693 [H]

Pfam domain/function: PF05423 Mycobact_memb [H]

EC number: NA

Molecular weight: Translated: 25368; Mature: 25368

Theoretical pI: Translated: 4.00; Mature: 4.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGYRGDSRYSSDYEPYDDPYNSETAPQSTEYSGLDEDFEYRPPGSNENWKWVASIAGAV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
FAIAVIATAVVLSGGNDKPPAAAVTTPVPALTPVTTTTAPPPPPSATSPAKPSTTTVTST
HHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC
PAQETPTAEPSTEAPPPEPPPSNPMLPPEGQRPITPAAFAYYVTGNQTPGDLLTITYTDG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECC
NGMTRTVLGASLPWTMIVTPSPGITGGSITATSFASQVNCSITNSENQMLAVQNSNSIIA
CCEEEEEECCCCCEEEEEECCCCCCCCCEEHHHHCCEEEEEEECCCCCEEEEECCCCEEE
RCAK
EECC
>Mature Secondary Structure
MVGYRGDSRYSSDYEPYDDPYNSETAPQSTEYSGLDEDFEYRPPGSNENWKWVASIAGAV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
FAIAVIATAVVLSGGNDKPPAAAVTTPVPALTPVTTTTAPPPPPSATSPAKPSTTTVTST
HHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC
PAQETPTAEPSTEAPPPEPPPSNPMLPPEGQRPITPAAFAYYVTGNQTPGDLLTITYTDG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECC
NGMTRTVLGASLPWTMIVTPSPGITGGSITATSFASQVNCSITNSENQMLAVQNSNSIIA
CCEEEEEECCCCCEEEEEECCCCCCCCCEEHHHHCCEEEEEEECCCCCEEEEECCCCEEE
RCAK
EECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]