| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630467
Identifier: 169630467
GI number: 169630467
Start: 3435317
End: 3436006
Strand: Reverse
Name: 169630467
Synonym: MAB_3386c
Alternate gene names: NA
Gene position: 3436006-3435317 (Counterclockwise)
Preceding gene: 169630469
Following gene: 169630465
Centisome position: 67.81
GC content: 63.62
Gene sequence:
>690_bases GTGAGCGGTAAATGGATTGGTTGGAGCGCGCGCGGCACCGCGCTGATGGTGGGTCTGTATCTGTACGGATTCTCGATGGC GCTCATGGTGCGCGCTGGCCTTGGATTGGATCCGTGGGATGTGTTCCATCAAGGGTTGGCGATGCGCACCGGAATGAGCA TCGGGCTTGCCTCGGCGGTGACCGGTGTGGTGGTGCTTCTCATGTGGATCCCGTTGCGCAATAAGCCCGGTGTCGGAACC ATCGCCAATATCATCGTCATCGCGATAGCCGTCGATACTGCTCTTGCCTGGTTGCCGGAGTCGCCGGCGATGCCGGTCCG GGTGTCGTTTCTGCTGAGCGGGGTGGTGTTGAACGCCATCGCCTCGGTGCTCTACGTGGGTGCGGGACTCGGCGCCGGGC CCCGTGATGGACTGACAACTGGCCTGGTACATCGCACCGGTCGGTCCGTACGTCTCATCCGGACCATCATCGAGGTGCTC GCAGTGGGTACGGGGTGGCTACTCGGTGGAAATGTGGGCGCCGGGACACTGCTCTACGCCTTCGGCATTGGGCCCCTCAT TCAGCTCGTGCTGCGACTGGTGCCGCGGCGGCTCTTGGCCGTCAGTGGCTGGGGCCCGGTGCTCAGTACGCAGCGCAACG CCGAATCACGGTCCACTCCGCTGGATTCAGCTCAGGATGTCGCGGTCTGA
Upstream 100 bases:
>100_bases CGGGCCAGGGTTTCGGCGGTGACCACTCGATCGGGCATAAAAGCCAGTGTGGCTCAACTGGCTATTGAATGACAAGCCAG TTGGCCGACAATATTGGCCC
Downstream 100 bases:
>100_bases TTGCGGCGATCGAAGGACTCCGCATCGGCGAGTAACTGGTCGCGAACGGGCTCAGGCAGTTCGAGCAGTTTGGATGTCAG CTCGGCCGCCGCCGGGTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MSGKWIGWSARGTALMVGLYLYGFSMALMVRAGLGLDPWDVFHQGLAMRTGMSIGLASAVTGVVVLLMWIPLRNKPGVGT IANIIVIAIAVDTALAWLPESPAMPVRVSFLLSGVVLNAIASVLYVGAGLGAGPRDGLTTGLVHRTGRSVRLIRTIIEVL AVGTGWLLGGNVGAGTLLYAFGIGPLIQLVLRLVPRRLLAVSGWGPVLSTQRNAESRSTPLDSAQDVAV
Sequences:
>Translated_229_residues MSGKWIGWSARGTALMVGLYLYGFSMALMVRAGLGLDPWDVFHQGLAMRTGMSIGLASAVTGVVVLLMWIPLRNKPGVGT IANIIVIAIAVDTALAWLPESPAMPVRVSFLLSGVVLNAIASVLYVGAGLGAGPRDGLTTGLVHRTGRSVRLIRTIIEVL AVGTGWLLGGNVGAGTLLYAFGIGPLIQLVLRLVPRRLLAVSGWGPVLSTQRNAESRSTPLDSAQDVAV >Mature_228_residues SGKWIGWSARGTALMVGLYLYGFSMALMVRAGLGLDPWDVFHQGLAMRTGMSIGLASAVTGVVVLLMWIPLRNKPGVGTI ANIIVIAIAVDTALAWLPESPAMPVRVSFLLSGVVLNAIASVLYVGAGLGAGPRDGLTTGLVHRTGRSVRLIRTIIEVLA VGTGWLLGGNVGAGTLLYAFGIGPLIQLVLRLVPRRLLAVSGWGPVLSTQRNAESRSTPLDSAQDVAV
Specific function: Unknown
COG id: COG2364
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003740 [H]
Pfam domain/function: PF02588 DUF161 [H]
EC number: NA
Molecular weight: Translated: 23919; Mature: 23788
Theoretical pI: Translated: 11.53; Mature: 11.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGKWIGWSARGTALMVGLYLYGFSMALMVRAGLGLDPWDVFHQGLAMRTGMSIGLASAV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHH TGVVVLLMWIPLRNKPGVGTIANIIVIAIAVDTALAWLPESPAMPVRVSFLLSGVVLNAI HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH ASVLYVGAGLGAGPRDGLTTGLVHRTGRSVRLIRTIIEVLAVGTGWLLGGNVGAGTLLYA HHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHH FGIGPLIQLVLRLVPRRLLAVSGWGPVLSTQRNAESRSTPLDSAQDVAV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SGKWIGWSARGTALMVGLYLYGFSMALMVRAGLGLDPWDVFHQGLAMRTGMSIGLASAV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHH TGVVVLLMWIPLRNKPGVGTIANIIVIAIAVDTALAWLPESPAMPVRVSFLLSGVVLNAI HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH ASVLYVGAGLGAGPRDGLTTGLVHRTGRSVRLIRTIIEVLAVGTGWLLGGNVGAGTLLYA HHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHH FGIGPLIQLVLRLVPRRLLAVSGWGPVLSTQRNAESRSTPLDSAQDVAV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]