The gene/protein map for NC_010397 is currently unavailable.
Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

Click here to switch to the map view.

The map label for this gene is 169630467

Identifier: 169630467

GI number: 169630467

Start: 3435317

End: 3436006

Strand: Reverse

Name: 169630467

Synonym: MAB_3386c

Alternate gene names: NA

Gene position: 3436006-3435317 (Counterclockwise)

Preceding gene: 169630469

Following gene: 169630465

Centisome position: 67.81

GC content: 63.62

Gene sequence:

>690_bases
GTGAGCGGTAAATGGATTGGTTGGAGCGCGCGCGGCACCGCGCTGATGGTGGGTCTGTATCTGTACGGATTCTCGATGGC
GCTCATGGTGCGCGCTGGCCTTGGATTGGATCCGTGGGATGTGTTCCATCAAGGGTTGGCGATGCGCACCGGAATGAGCA
TCGGGCTTGCCTCGGCGGTGACCGGTGTGGTGGTGCTTCTCATGTGGATCCCGTTGCGCAATAAGCCCGGTGTCGGAACC
ATCGCCAATATCATCGTCATCGCGATAGCCGTCGATACTGCTCTTGCCTGGTTGCCGGAGTCGCCGGCGATGCCGGTCCG
GGTGTCGTTTCTGCTGAGCGGGGTGGTGTTGAACGCCATCGCCTCGGTGCTCTACGTGGGTGCGGGACTCGGCGCCGGGC
CCCGTGATGGACTGACAACTGGCCTGGTACATCGCACCGGTCGGTCCGTACGTCTCATCCGGACCATCATCGAGGTGCTC
GCAGTGGGTACGGGGTGGCTACTCGGTGGAAATGTGGGCGCCGGGACACTGCTCTACGCCTTCGGCATTGGGCCCCTCAT
TCAGCTCGTGCTGCGACTGGTGCCGCGGCGGCTCTTGGCCGTCAGTGGCTGGGGCCCGGTGCTCAGTACGCAGCGCAACG
CCGAATCACGGTCCACTCCGCTGGATTCAGCTCAGGATGTCGCGGTCTGA

Upstream 100 bases:

>100_bases
CGGGCCAGGGTTTCGGCGGTGACCACTCGATCGGGCATAAAAGCCAGTGTGGCTCAACTGGCTATTGAATGACAAGCCAG
TTGGCCGACAATATTGGCCC

Downstream 100 bases:

>100_bases
TTGCGGCGATCGAAGGACTCCGCATCGGCGAGTAACTGGTCGCGAACGGGCTCAGGCAGTTCGAGCAGTTTGGATGTCAG
CTCGGCCGCCGCCGGGTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MSGKWIGWSARGTALMVGLYLYGFSMALMVRAGLGLDPWDVFHQGLAMRTGMSIGLASAVTGVVVLLMWIPLRNKPGVGT
IANIIVIAIAVDTALAWLPESPAMPVRVSFLLSGVVLNAIASVLYVGAGLGAGPRDGLTTGLVHRTGRSVRLIRTIIEVL
AVGTGWLLGGNVGAGTLLYAFGIGPLIQLVLRLVPRRLLAVSGWGPVLSTQRNAESRSTPLDSAQDVAV

Sequences:

>Translated_229_residues
MSGKWIGWSARGTALMVGLYLYGFSMALMVRAGLGLDPWDVFHQGLAMRTGMSIGLASAVTGVVVLLMWIPLRNKPGVGT
IANIIVIAIAVDTALAWLPESPAMPVRVSFLLSGVVLNAIASVLYVGAGLGAGPRDGLTTGLVHRTGRSVRLIRTIIEVL
AVGTGWLLGGNVGAGTLLYAFGIGPLIQLVLRLVPRRLLAVSGWGPVLSTQRNAESRSTPLDSAQDVAV
>Mature_228_residues
SGKWIGWSARGTALMVGLYLYGFSMALMVRAGLGLDPWDVFHQGLAMRTGMSIGLASAVTGVVVLLMWIPLRNKPGVGTI
ANIIVIAIAVDTALAWLPESPAMPVRVSFLLSGVVLNAIASVLYVGAGLGAGPRDGLTTGLVHRTGRSVRLIRTIIEVLA
VGTGWLLGGNVGAGTLLYAFGIGPLIQLVLRLVPRRLLAVSGWGPVLSTQRNAESRSTPLDSAQDVAV

Specific function: Unknown

COG id: COG2364

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003740 [H]

Pfam domain/function: PF02588 DUF161 [H]

EC number: NA

Molecular weight: Translated: 23919; Mature: 23788

Theoretical pI: Translated: 11.53; Mature: 11.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGKWIGWSARGTALMVGLYLYGFSMALMVRAGLGLDPWDVFHQGLAMRTGMSIGLASAV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHH
TGVVVLLMWIPLRNKPGVGTIANIIVIAIAVDTALAWLPESPAMPVRVSFLLSGVVLNAI
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
ASVLYVGAGLGAGPRDGLTTGLVHRTGRSVRLIRTIIEVLAVGTGWLLGGNVGAGTLLYA
HHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHH
FGIGPLIQLVLRLVPRRLLAVSGWGPVLSTQRNAESRSTPLDSAQDVAV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SGKWIGWSARGTALMVGLYLYGFSMALMVRAGLGLDPWDVFHQGLAMRTGMSIGLASAV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHH
TGVVVLLMWIPLRNKPGVGTIANIIVIAIAVDTALAWLPESPAMPVRVSFLLSGVVLNAI
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
ASVLYVGAGLGAGPRDGLTTGLVHRTGRSVRLIRTIIEVLAVGTGWLLGGNVGAGTLLYA
HHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHH
FGIGPLIQLVLRLVPRRLLAVSGWGPVLSTQRNAESRSTPLDSAQDVAV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]