| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is abcX [H]
Identifier: 169630465
GI number: 169630465
Start: 3433626
End: 3434519
Strand: Reverse
Name: abcX [H]
Synonym: MAB_3384c
Alternate gene names: 169630465
Gene position: 3434519-3433626 (Counterclockwise)
Preceding gene: 169630467
Following gene: 169630464
Centisome position: 67.78
GC content: 64.99
Gene sequence:
>894_bases ATGTCGGAGATGACGCGCTATAGGGCTCCCGCTGACCGCTCGCGCGGCGGGATACGGCACGATGACCCAGTGGCCGAAAT TGATCCGGACCTTCTGCTCGATTTCCGCGATGTGCTGCTGCGCCGCAACCGCAAGGTGTTGGTAGGCCCGGTCACCTGGT CGGTCGAGCTCGACGAACGCTGGGTGGTTCTCGGCCCCAACGGCGCCGGGAAGACATCGTTGCTGCGAATCGCGGCGGCC ATGGAGCACCCCACCTCTGGGTATGCGGCGATTCTCGGCGAGCGGCTGGGCCGTGTCGACGTCGCTGAACTCAAGTCGAG GATCGGCCTGAGTTCGGCCGCGCTGGCGCAGCGCATTCCCGATAACGAGGTGGTTCGCGATCTGGTGGTGTCGGCCGGAT ACGCGGTGCTGGGCCGCTGGCGCGAAGAATACGAAGAGATCGATACCGCCCGTGCCGTGGACATGCTCGAAACCCTTGGT GCCGAGCATCTGTCGGATCGTACGTACGGGACGCTGTCCGAGGGGGAGCGCAAGCGGGTGCTCATCGCGCGGGCGTTGAT GACCGATCCGGAGCTGTTGCTCCTCGATGAACCGGCCGCAGGCCTGGATCTGGGTGGGCGTGAGGAACTTGTCGCGCGGC TGGGTGAGCTTGCCGCCGATCCGGACGCACCCGCCATGGTTTTGGTGACTCATCATGTGGAGGAAATTCCGCCAGGGTTC AGTCACGCATTGTTGCTGTCCGAGGGCGGGATTGTCGCTCAGGGCCTGCTGGCCGATGTGATGACCAGTGAGAATCTGTC CCGCGCGTTCGGCCAGTCGATCGTGGTTGAGATGATCGACGGGCGTTACTTCGCGCGACGTGCCCGCGCCAGGGCAGCCC ACCGTGCGCAGTAG
Upstream 100 bases:
>100_bases GGTAAGGATCCGGATCGAAGTCGTTTGTCATGTGGTTGCCTGGAATTCCCTCCGAGATTGCTAACGTATGAGTGAGGATA CGCGATACAGGTCTGGGCGC
Downstream 100 bases:
>100_bases CGCGCAAAGTGAAGGAATTCTCCCCATGACAGCAGCGACACCACCCGAGCCAAAGCCGGCGGCCACCGTCGTATTGATCC GTGACGGGGCCGTCGGCGTC
Product: ABC transporter ATP-binding protein
Products: ADP; phosphate; ferric enterobactin [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MSEMTRYRAPADRSRGGIRHDDPVAEIDPDLLLDFRDVLLRRNRKVLVGPVTWSVELDERWVVLGPNGAGKTSLLRIAAA MEHPTSGYAAILGERLGRVDVAELKSRIGLSSAALAQRIPDNEVVRDLVVSAGYAVLGRWREEYEEIDTARAVDMLETLG AEHLSDRTYGTLSEGERKRVLIARALMTDPELLLLDEPAAGLDLGGREELVARLGELAADPDAPAMVLVTHHVEEIPPGF SHALLLSEGGIVAQGLLADVMTSENLSRAFGQSIVVEMIDGRYFARRARARAAHRAQ
Sequences:
>Translated_297_residues MSEMTRYRAPADRSRGGIRHDDPVAEIDPDLLLDFRDVLLRRNRKVLVGPVTWSVELDERWVVLGPNGAGKTSLLRIAAA MEHPTSGYAAILGERLGRVDVAELKSRIGLSSAALAQRIPDNEVVRDLVVSAGYAVLGRWREEYEEIDTARAVDMLETLG AEHLSDRTYGTLSEGERKRVLIARALMTDPELLLLDEPAAGLDLGGREELVARLGELAADPDAPAMVLVTHHVEEIPPGF SHALLLSEGGIVAQGLLADVMTSENLSRAFGQSIVVEMIDGRYFARRARARAAHRAQ >Mature_296_residues SEMTRYRAPADRSRGGIRHDDPVAEIDPDLLLDFRDVLLRRNRKVLVGPVTWSVELDERWVVLGPNGAGKTSLLRIAAAM EHPTSGYAAILGERLGRVDVAELKSRIGLSSAALAQRIPDNEVVRDLVVSAGYAVLGRWREEYEEIDTARAVDMLETLGA EHLSDRTYGTLSEGERKRVLIARALMTDPELLLLDEPAAGLDLGGREELVARLGELAADPDAPAMVLVTHHVEEIPPGFS HALLLSEGGIVAQGLLADVMTSENLSRAFGQSIVVEMIDGRYFARRARARAAHRAQ
Specific function: Part Of The Binding-Protein-Dependent Transport System For Ferric Enterobactin. Probably Responsible For Energy Coupling To The Transport System. [C]
COG id: COG1119
COG function: function code P; ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI27436953, Length=161, Percent_Identity=29.8136645962733, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI27262624, Length=225, Percent_Identity=25.3333333333333, Blast_Score=66, Evalue=5e-11, Organism=Homo sapiens, GI27262626, Length=225, Percent_Identity=25.3333333333333, Blast_Score=66, Evalue=5e-11, Organism=Escherichia coli, GI1786803, Length=219, Percent_Identity=33.3333333333333, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1786975, Length=239, Percent_Identity=29.2887029288703, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1788761, Length=191, Percent_Identity=35.0785340314136, Blast_Score=95, Evalue=7e-21, Organism=Escherichia coli, GI1787089, Length=211, Percent_Identity=34.1232227488152, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1786319, Length=212, Percent_Identity=33.0188679245283, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI87081709, Length=229, Percent_Identity=27.9475982532751, Blast_Score=84, Evalue=8e-18, Organism=Escherichia coli, GI87081834, Length=187, Percent_Identity=30.4812834224599, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1787712, Length=181, Percent_Identity=31.4917127071823, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI1786872, Length=191, Percent_Identity=29.3193717277487, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1786563, Length=201, Percent_Identity=31.8407960199005, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1786253, Length=213, Percent_Identity=26.2910798122066, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1786345, Length=251, Percent_Identity=25.8964143426295, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1790739, Length=222, Percent_Identity=27.4774774774775, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1788450, Length=219, Percent_Identity=29.6803652968037, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1789593, Length=226, Percent_Identity=29.2035398230088, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1790467, Length=188, Percent_Identity=32.9787234042553, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1787547, Length=233, Percent_Identity=26.6094420600858, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1788225, Length=241, Percent_Identity=26.5560165975104, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1787029, Length=204, Percent_Identity=27.4509803921569, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1789864, Length=250, Percent_Identity=24, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI87081782, Length=214, Percent_Identity=26.6355140186916, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1789032, Length=248, Percent_Identity=25.8064516129032, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1786698, Length=191, Percent_Identity=27.2251308900524, Blast_Score=68, Evalue=8e-13, Organism=Escherichia coli, GI87081791, Length=205, Percent_Identity=28.2926829268293, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1788897, Length=227, Percent_Identity=28.6343612334802, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1787370, Length=191, Percent_Identity=29.8429319371728, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1790190, Length=220, Percent_Identity=27.2727272727273, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1789891, Length=226, Percent_Identity=24.3362831858407, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1788644, Length=204, Percent_Identity=29.4117647058824, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1790525, Length=248, Percent_Identity=23.7903225806452, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI48994943, Length=213, Percent_Identity=24.4131455399061, Blast_Score=62, Evalue=5e-11, Organism=Escherichia coli, GI87082267, Length=208, Percent_Identity=25.9615384615385, Blast_Score=61, Evalue=9e-11, Organism=Escherichia coli, GI1787164, Length=191, Percent_Identity=31.9371727748691, Blast_Score=61, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17510237, Length=287, Percent_Identity=26.4808362369338, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71983523, Length=222, Percent_Identity=26.5765765765766, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71983516, Length=222, Percent_Identity=26.5765765765766, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71983510, Length=222, Percent_Identity=26.5765765765766, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI193202349, Length=246, Percent_Identity=24.7967479674797, Blast_Score=66, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6320266, Length=211, Percent_Identity=30.8056872037915, Blast_Score=74, Evalue=2e-14, Organism=Drosophila melanogaster, GI24643674, Length=289, Percent_Identity=25.6055363321799, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI221512771, Length=235, Percent_Identity=27.6595744680851, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI161076682, Length=217, Percent_Identity=27.6497695852535, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI161076684, Length=235, Percent_Identity=26.8085106382979, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24581617, Length=235, Percent_Identity=26.8085106382979, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24581615, Length=235, Percent_Identity=26.8085106382979, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24582014, Length=238, Percent_Identity=26.890756302521, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24582012, Length=238, Percent_Identity=26.890756302521, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI28574744, Length=222, Percent_Identity=27.9279279279279, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI85726357, Length=246, Percent_Identity=24.390243902439, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI21357907, Length=218, Percent_Identity=27.9816513761468, Blast_Score=65, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 32481; Mature: 32350
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEMTRYRAPADRSRGGIRHDDPVAEIDPDLLLDFRDVLLRRNRKVLVGPVTWSVELDER CCCCHHHCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCE WVVLGPNGAGKTSLLRIAAAMEHPTSGYAAILGERLGRVDVAELKSRIGLSSAALAQRIP EEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHCC DNEVVRDLVVSAGYAVLGRWREEYEEIDTARAVDMLETLGAEHLSDRTYGTLSEGERKRV CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCHHHH LIARALMTDPELLLLDEPAAGLDLGGREELVARLGELAADPDAPAMVLVTHHVEEIPPGF HHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCC SHALLLSEGGIVAQGLLADVMTSENLSRAFGQSIVVEMIDGRYFARRARARAAHRAQ CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SEMTRYRAPADRSRGGIRHDDPVAEIDPDLLLDFRDVLLRRNRKVLVGPVTWSVELDER CCCHHHCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCE WVVLGPNGAGKTSLLRIAAAMEHPTSGYAAILGERLGRVDVAELKSRIGLSSAALAQRIP EEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHCC DNEVVRDLVVSAGYAVLGRWREEYEEIDTARAVDMLETLGAEHLSDRTYGTLSEGERKRV CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCHHHH LIARALMTDPELLLLDEPAAGLDLGGREELVARLGELAADPDAPAMVLVTHHVEEIPPGF HHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCC SHALLLSEGGIVAQGLLADVMTSENLSRAFGQSIVVEMIDGRYFARRARARAAHRAQ CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; ferric enterobactin [Periplasm]; H2O [C]
Specific reaction: ATP + ferric enterobactin [Periplasm] + H2O = ADP + phosphate + ferric enterobactin [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11029425; 12397186 [H]