| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630461
Identifier: 169630461
GI number: 169630461
Start: 3429772
End: 3430965
Strand: Reverse
Name: 169630461
Synonym: MAB_3380c
Alternate gene names: NA
Gene position: 3430965-3429772 (Counterclockwise)
Preceding gene: 169630462
Following gene: 169630459
Centisome position: 67.71
GC content: 68.09
Gene sequence:
>1194_bases GTGTTCGATCTCTCCGACGTCGCATACCTGTCGTCGGAGGCGGGCGCCGCAGACCTGGCCCGGGCCTCCACGTATACGTT CTCGGCGGGCACCCTGGTGGCCGACACGGCGGCCCTGCGCAACGAATTCGGTGATCACGCAGCAGTTTTGGCGCAGACGG TGCAGCTGCGCCGCAAGGCGGCAGCCAAGCTGGGCCGCGTTGACCACTGGCTGTTCACCGATGACGCCCTGCAGCAGGCC ACCCCGGCCGCGGTGGCCAGACATCGGGCCGCCCGGCTGGCCGGCTTGGTGGTGCACGATGTCACGTGCTCGGTCGGGGC AGAGCTTGCGGCCCTTGATGGCGTCGCGGCGGCAGTCATCGGGAGCGATATCGATCCGGTGCGAACGGCAATGGCGCGCA ATAATATCGGCGAACATGTCCTGGTGTGCAGGGCCGATGCGTTGGCCCCCTCCAGTCGTGCTCAGGTGGTCATCGCCGAT CCGGGGCGCCGCGCCGGTGGGCGCCGGCGGTTCGATCCATCCGCCTACTCACCGCCGCTGGACGCCGTGCTGCGGAGCTA TGCCGATCGCGACCTGGTGGTCAAATGCGCTCCGGGACTGGACTTTGCCGATCTGCGGGAACAGACGGGTTTCGACGGTG AGATCGAGGTGGTGTCATTGGACGGTGGCGTCCGCGAGGCGTGCCTGTGGTCGGCCGGATTGGCGGGCGCGCGGCGGCGT GCCACCGTGCTGGCGACCATTGGTACGGGCTACCAGCTGACCGACGCCGACCCCGATGACTGCGCGGTGGCCGGTGCGGG CGAGTGGATCATCGATCCGGACGGCGCGGTGGTGCGTGCGGGCCTGGTGCGTCAGTACGCCGCGCGACACGGTCTGTGGC AGCTGGACGCCCGCATTGCCTATCTATCCGGGGATTGTGTGCCAGCCGGTGTGCAGGGCTACCGGGTGCTCGATTCGCTG CCCTACAGTGAGAAGCGGCTGCGTCAGGCCCTGGCCGCCCGGGACTGCGGGGCCGTCGAGATCACCGTCCGTGGCGTTGA TCTGGACCCCGCGTTGTTACGCACCAGGCTGAAGTTGCGCGGCAGTGTGCCCTTGTCTGTTGTTATCACCCGAATAGGCA GTGGTGCAAAGGCTTTCGTCTGCGCGGCTAGGTCTCCGGGCGGAACCCGTACACCAGACCCTCGCTCAGCGTGA
Upstream 100 bases:
>100_bases GGGTGGACGAGAACGTGTGGCGTCATGTGGTGCCGAAGGGCTGGTACTACAACGTGATGATCACCGGGATCAAGCCGTCC TGATCTTCCGATAGCTGCCG
Downstream 100 bases:
>100_bases CGATGACACGCTGGTCCGGTCCGATCGAAATCCCCACCGGAAATCCTGTGGCATCGGGCAGTGGATAGCGGTTGATGGTA GCCCCGTCCGGGGTGTTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MFDLSDVAYLSSEAGAADLARASTYTFSAGTLVADTAALRNEFGDHAAVLAQTVQLRRKAAAKLGRVDHWLFTDDALQQA TPAAVARHRAARLAGLVVHDVTCSVGAELAALDGVAAAVIGSDIDPVRTAMARNNIGEHVLVCRADALAPSSRAQVVIAD PGRRAGGRRRFDPSAYSPPLDAVLRSYADRDLVVKCAPGLDFADLREQTGFDGEIEVVSLDGGVREACLWSAGLAGARRR ATVLATIGTGYQLTDADPDDCAVAGAGEWIIDPDGAVVRAGLVRQYAARHGLWQLDARIAYLSGDCVPAGVQGYRVLDSL PYSEKRLRQALAARDCGAVEITVRGVDLDPALLRTRLKLRGSVPLSVVITRIGSGAKAFVCAARSPGGTRTPDPRSA
Sequences:
>Translated_397_residues MFDLSDVAYLSSEAGAADLARASTYTFSAGTLVADTAALRNEFGDHAAVLAQTVQLRRKAAAKLGRVDHWLFTDDALQQA TPAAVARHRAARLAGLVVHDVTCSVGAELAALDGVAAAVIGSDIDPVRTAMARNNIGEHVLVCRADALAPSSRAQVVIAD PGRRAGGRRRFDPSAYSPPLDAVLRSYADRDLVVKCAPGLDFADLREQTGFDGEIEVVSLDGGVREACLWSAGLAGARRR ATVLATIGTGYQLTDADPDDCAVAGAGEWIIDPDGAVVRAGLVRQYAARHGLWQLDARIAYLSGDCVPAGVQGYRVLDSL PYSEKRLRQALAARDCGAVEITVRGVDLDPALLRTRLKLRGSVPLSVVITRIGSGAKAFVCAARSPGGTRTPDPRSA >Mature_397_residues MFDLSDVAYLSSEAGAADLARASTYTFSAGTLVADTAALRNEFGDHAAVLAQTVQLRRKAAAKLGRVDHWLFTDDALQQA TPAAVARHRAARLAGLVVHDVTCSVGAELAALDGVAAAVIGSDIDPVRTAMARNNIGEHVLVCRADALAPSSRAQVVIAD PGRRAGGRRRFDPSAYSPPLDAVLRSYADRDLVVKCAPGLDFADLREQTGFDGEIEVVSLDGGVREACLWSAGLAGARRR ATVLATIGTGYQLTDADPDDCAVAGAGEWIIDPDGAVVRAGLVRQYAARHGLWQLDARIAYLSGDCVPAGVQGYRVLDSL PYSEKRLRQALAARDCGAVEITVRGVDLDPALLRTRLKLRGSVPLSVVITRIGSGAKAFVCAARSPGGTRTPDPRSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41705; Mature: 41705
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDLSDVAYLSSEAGAADLARASTYTFSAGTLVADTAALRNEFGDHAAVLAQTVQLRRKA CCCCHHHHHHHCCCCHHHHHHCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHH AAKLGRVDHWLFTDDALQQATPAAVARHRAARLAGLVVHDVTCSVGAELAALDGVAAAVI HHHHCCCCEEEECCHHHHHCCHHHHHHHHHHHHHHHHEEEEHHHCCCHHHHHHHHHHHHH GSDIDPVRTAMARNNIGEHVLVCRADALAPSSRAQVVIADPGRRAGGRRRFDPSAYSPPL CCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCH DAVLRSYADRDLVVKCAPGLDFADLREQTGFDGEIEVVSLDGGVREACLWSAGLAGARRR HHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCC ATVLATIGTGYQLTDADPDDCAVAGAGEWIIDPDGAVVRAGLVRQYAARHGLWQLDARIA EEEEEEECCCEEECCCCCCCCEEECCCCEEECCCCHHHHHHHHHHHHHHCCCEEECCEEE YLSGDCVPAGVQGYRVLDSLPYSEKRLRQALAARDCGAVEITVRGVDLDPALLRTRLKLR EEECCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHC GSVPLSVVITRIGSGAKAFVCAARSPGGTRTPDPRSA CCCCHHHHEECCCCCCEEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MFDLSDVAYLSSEAGAADLARASTYTFSAGTLVADTAALRNEFGDHAAVLAQTVQLRRKA CCCCHHHHHHHCCCCHHHHHHCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHH AAKLGRVDHWLFTDDALQQATPAAVARHRAARLAGLVVHDVTCSVGAELAALDGVAAAVI HHHHCCCCEEEECCHHHHHCCHHHHHHHHHHHHHHHHEEEEHHHCCCHHHHHHHHHHHHH GSDIDPVRTAMARNNIGEHVLVCRADALAPSSRAQVVIADPGRRAGGRRRFDPSAYSPPL CCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCH DAVLRSYADRDLVVKCAPGLDFADLREQTGFDGEIEVVSLDGGVREACLWSAGLAGARRR HHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCC ATVLATIGTGYQLTDADPDDCAVAGAGEWIIDPDGAVVRAGLVRQYAARHGLWQLDARIA EEEEEEECCCEEECCCCCCCCEEECCCCEEECCCCHHHHHHHHHHHHHHCCCEEECCEEE YLSGDCVPAGVQGYRVLDSLPYSEKRLRQALAARDCGAVEITVRGVDLDPALLRTRLKLR EEECCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHC GSVPLSVVITRIGSGAKAFVCAARSPGGTRTPDPRSA CCCCHHHHEECCCCCCEEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA