| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is wbbJ [C]
Identifier: 169630459
GI number: 169630459
Start: 3427691
End: 3428440
Strand: Reverse
Name: wbbJ [C]
Synonym: MAB_3378c
Alternate gene names: 169630459
Gene position: 3428440-3427691 (Counterclockwise)
Preceding gene: 169630461
Following gene: 169630455
Centisome position: 67.66
GC content: 64.27
Gene sequence:
>750_bases ATGACGACGATGTGGGGCGCTCCCCTGCACAAGCGGTGGCGCGGGCAGCGCCTGCGGGACCCGTTGCAAGCGAAATTCCT GACCAGGGACTCGCTGCGCTGGGTGATCGCCAACAAGGCATACACCCCGTGGTACCTGGTGCGTTACTGGCGACTACTCA AGTTCAAGCTCGCCAACCCGCACATCGTCACGCGTGGCATGTTGTTCCTCGGCAAGAACGTCGAGATCCACTGCACCCCC GAGTTGGCGCGGATGGAGATCGGCCGATGGGTGCACATCGGTGACGGGAACTCGCTGCGTGCCCACGAGGGCTCCCTGCG CCTCGGCGACAAGGTGGTCTTCGGCAAGGACAACGTCGTCAACGCCTACATCGATATCGAGTTCGGCGACTCGGCCCTCA TGGCCGACTGGTGCTACGTCTGCGACTTCGACCATCGGATGGAAGACATCACCTACCCGATCAAGGATCAGGGCATCGTC AAGTCTCCGGTGCGCATCGGACCGGACACCTGGATCGCCGCCAAAGTGACCATCCTGCGCGACACGATCGTCGGGCGCGG TTGCGTGCTGGGTGCTCACGCCGTGGTCAAGGGCGTGATACCGGACTACTCGATTGCGGTCGGCGCGCCGGCCAAGGTGG TCAAGAACCGGAAGGTGGCCTGGGACGCCTCGGGTGCCCAGCGTGCGCAGCTGGCCGAGGCGCTGGCCGATATCGAACGC AAGAAGGCGGCCGCTAACTCACCGGAGTGA
Upstream 100 bases:
>100_bases TGCCCGGGAAAGCACGGTGAGGCACTCCTTCCTTAGGGGGCGGTCCGGCCCATCGCAGGGTAGCGTGTGCGTCCCGCCGC GTCCCGTAGGCTGTGCGGCC
Downstream 100 bases:
>100_bases GTGTGAACAGGGGGAACACCCGGGTCGTCCGTGTTGTGTACTCCGCGTAAGGCGGGAAGGCGGCTACGGCACGCTCCCAC CACGCGGCACGTTCAGCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MTTMWGAPLHKRWRGQRLRDPLQAKFLTRDSLRWVIANKAYTPWYLVRYWRLLKFKLANPHIVTRGMLFLGKNVEIHCTP ELARMEIGRWVHIGDGNSLRAHEGSLRLGDKVVFGKDNVVNAYIDIEFGDSALMADWCYVCDFDHRMEDITYPIKDQGIV KSPVRIGPDTWIAAKVTILRDTIVGRGCVLGAHAVVKGVIPDYSIAVGAPAKVVKNRKVAWDASGAQRAQLAEALADIER KKAAANSPE
Sequences:
>Translated_249_residues MTTMWGAPLHKRWRGQRLRDPLQAKFLTRDSLRWVIANKAYTPWYLVRYWRLLKFKLANPHIVTRGMLFLGKNVEIHCTP ELARMEIGRWVHIGDGNSLRAHEGSLRLGDKVVFGKDNVVNAYIDIEFGDSALMADWCYVCDFDHRMEDITYPIKDQGIV KSPVRIGPDTWIAAKVTILRDTIVGRGCVLGAHAVVKGVIPDYSIAVGAPAKVVKNRKVAWDASGAQRAQLAEALADIER KKAAANSPE >Mature_248_residues TTMWGAPLHKRWRGQRLRDPLQAKFLTRDSLRWVIANKAYTPWYLVRYWRLLKFKLANPHIVTRGMLFLGKNVEIHCTPE LARMEIGRWVHIGDGNSLRAHEGSLRLGDKVVFGKDNVVNAYIDIEFGDSALMADWCYVCDFDHRMEDITYPIKDQGIVK SPVRIGPDTWIAAKVTILRDTIVGRGCVLGAHAVVKGVIPDYSIAVGAPAKVVKNRKVAWDASGAQRAQLAEALADIERK KAAANSPE
Specific function: Putative O-Acetyltransferase That Transfers An O-Acetyl Group To The O Antigen. [C]
COG id: COG0110
COG function: function code R; Acetyltransferase (isoleucine patch superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1788345, Length=122, Percent_Identity=34.4262295081967, Blast_Score=67, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018357 - InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: 2.3.1.- [C]
Molecular weight: Translated: 28001; Mature: 27870
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTMWGAPLHKRWRGQRLRDPLQAKFLTRDSLRWVIANKAYTPWYLVRYWRLLKFKLANP CCCCCCCCHHHHHCCHHHCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCC HIVTRGMLFLGKNVEIHCTPELARMEIGRWVHIGDGNSLRAHEGSLRLGDKVVFGKDNVV EEEEEEEEEECCCCEEEECCHHHHHCCCCEEEECCCCCEEECCCCEEECCEEEECCCCEE NAYIDIEFGDSALMADWCYVCDFDHRMEDITYPIKDQGIVKSPVRIGPDTWIAAKVTILR EEEEEEEECCCCHHEEEEEEECCCHHHHHCCCCCCCCCCCCCCCEECCCCEEEEEEEEEH DTIVGRGCVLGAHAVVKGVIPDYSIAVGAPAKVVKNRKVAWDASGAQRAQLAEALADIER HHHHCCCCEEHHHHHHHHCCCCCEEEECCCHHHHCCCCEEECCCCHHHHHHHHHHHHHHH KKAAANSPE HHCCCCCCC >Mature Secondary Structure TTMWGAPLHKRWRGQRLRDPLQAKFLTRDSLRWVIANKAYTPWYLVRYWRLLKFKLANP CCCCCCCHHHHHCCHHHCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCC HIVTRGMLFLGKNVEIHCTPELARMEIGRWVHIGDGNSLRAHEGSLRLGDKVVFGKDNVV EEEEEEEEEECCCCEEEECCHHHHHCCCCEEEECCCCCEEECCCCEEECCEEEECCCCEE NAYIDIEFGDSALMADWCYVCDFDHRMEDITYPIKDQGIVKSPVRIGPDTWIAAKVTILR EEEEEEEECCCCHHEEEEEEECCCHHHHHCCCCCCCCCCCCCCCEECCCCEEEEEEEEEH DTIVGRGCVLGAHAVVKGVIPDYSIAVGAPAKVVKNRKVAWDASGAQRAQLAEALADIER HHHHCCCCEEHHHHHHHHCCCCCEEEECCCHHHHCCCCEEECCCCHHHHHHHHHHHHHHH KKAAANSPE HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]