| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is ilvB1 [H]
Identifier: 169630404
GI number: 169630404
Start: 3368087
End: 3369931
Strand: Reverse
Name: ilvB1 [H]
Synonym: MAB_3323c
Alternate gene names: 169630404
Gene position: 3369931-3368087 (Counterclockwise)
Preceding gene: 169630406
Following gene: 169630403
Centisome position: 66.51
GC content: 66.4
Gene sequence:
>1845_bases ATGAGCGCTCCCGCAAAGCCCAAGCCGGCTTCTGCTTCTGGGCGGGCCCCAGGAACAGCCCCGGAACCCAACACCGTCGC ACCCCAGCGCGTCACCGGCGCGCAGTCGGTAGTGCGGTCGCTTGAGGAGCTCGGCGTCGAAGTGATCTTCGGCATTCCCG GTGGTGCGGTCCTGCCCGTCTACGACCCGCTCTACGACTCCACCAAGGTGCGCCACGTGCTGGTGCGTCATGAGCAGGGT GCCGGGCATGCCGCCAGCGGTTACGCGCATGCCAACGGCAAGGTCGGCGTCATGATGGCCACCTCCGGCCCCGGTGCCAC CAACCTGGTCACCCCGCTGGCCGACGCGCAGATGGACTCGATCCCGGTTGTGGCGATCACCGGCCAGGTGGGTCGCGGCC TCATCGGTACGGATGCTTTCCAGGAAGCCGACATCTCCGGCATCACGATGCCCATCACCAAGCACAACTTCCTGGTGAGC AACGCCGAGGACATCCCGAAGGTGATCGCCGAGGCCTTCTACATCGCGCAGAGCGGCCGTCCCGGTGCGGTGCTCGTGGA CATCCCCAAGGACATCCTGCAGGCACAGACCACGTTCAGCTGGCCGCCGCAGATCTACCTGCCCGGCTACAAGCCGGTCA CCAAGCCGCACGGCAAGCAGGTTCGTGAGGCGGTCCGGCTCATCGCCGCCGCCAAGCGCCCGGTGCTGTACGTCGGCGGC GGTGTCATCCGTGCGGACGCCTCCCCGGAACTCAAGGAATTGGCCGAACTGACCGGCATCCCCGTCGTCACCACCCTTAT GGCGCGCGGTGCATTCCCCGACAGCCACGAGCTGCACATGGGTATGCCCGGGATGCACGGCACGGTCGGTGCGGTGGCCG CACTGCAGCGCAGCGATCTGCTGATCACCCTGGGTGCCCGATTCGATGACCGGGTTACCGGGCAGCTGGACTCGTTTGCG CCGGAGGCCAAGGTGATTCACGCCGACATCGACCCGGCCGAGATCGGTAAGAACCGGCATGCCGATGTGCCGATCGTCGG CGACGTGAAGAACGTCATCATCGAGCTGATCGAGGCGATCCGGGCGGACCGCGCTGCCGGCACGGTGGCCGATCCTCTCT CCGAATGGTGGGAGTACCTGTCGGATGTCCGCAAGACGTATCCGCTGGGATACGACGCGCAGCACGACGGCAGCCTGGGC CCGGAGTTCGTCATCGAAACGCTGGGCAAGATCGCCGGACCCGACGCGGTGTACGTGGCGGGTGTGGGTCAGCACCAGAT GTGGGCCGCGCAGTTCATCAAATACGAGAACCCGCGCACCTGGCTCAACTCCGGGGGCCTGGGCACCATGGGCTTCGCGG TGCCCGCCGCCATGGGCGCCAAGATGGCGCGGCCCGAGGCCGAGGTGTGGGCCATCGACGGTGACGGCTGCTTCCAGATG ACCAACCAGGAGCTGGCGACCTGCGCCATCGAGGGTGTGCCCATCAAGGTCGCGCTCATCAACAACGGCAATCTGGGCAT GGTGCGCCAGTGGCAGACCCTGTTCTACGAGGAGCGCTACTCGCAGACGGATCTGGCGACACACTCGCGCCGCATCCCCG ATTTCGTGAAGCTGGCCGAGGCGCTGGGTTGTGTCGGATTGCGTTGCGAGCGTGAAGAAGACGTGGCCAAGGTGATCGAA GAGGCGCGCGCCATCAATGACCGCCCGGTGGTCATCGACTTCATCGTCGGTGCCGACGCTCAGGTGTGGCCCATGGTCGC CGCCGGCACCAGCAATGACGAGATCCAGGCGGCCCGGGGCATCCGGCCGCTGTTCGACGACGACGAATTGGTGGCAGACG AATGA
Upstream 100 bases:
>100_bases GCGCACACTCGACGCGCAACCCTCGTACAGCAGACCGCTGGCGGGGGTTTTTTGTTGCCATAGGTTTTCAGTACGGCCAC AACAAGAGGACAGACCACCA
Downstream 100 bases:
>100_bases CAAGTACCCACACCCTGAGCGTTCTGGTCGAGGACCGTCCCGGTGTGCTCGCCCGCGTCGCCGCACTGTTTTCCCGCCGT GGCTTCAACATCGCCTCGCT
Product: acetolactate synthase 1 catalytic subunit
Products: NA
Alternate protein names: ALS; Acetohydroxy-acid synthase large subunit; AHAS [H]
Number of amino acids: Translated: 614; Mature: 613
Protein sequence:
>614_residues MSAPAKPKPASASGRAPGTAPEPNTVAPQRVTGAQSVVRSLEELGVEVIFGIPGGAVLPVYDPLYDSTKVRHVLVRHEQG AGHAASGYAHANGKVGVMMATSGPGATNLVTPLADAQMDSIPVVAITGQVGRGLIGTDAFQEADISGITMPITKHNFLVS NAEDIPKVIAEAFYIAQSGRPGAVLVDIPKDILQAQTTFSWPPQIYLPGYKPVTKPHGKQVREAVRLIAAAKRPVLYVGG GVIRADASPELKELAELTGIPVVTTLMARGAFPDSHELHMGMPGMHGTVGAVAALQRSDLLITLGARFDDRVTGQLDSFA PEAKVIHADIDPAEIGKNRHADVPIVGDVKNVIIELIEAIRADRAAGTVADPLSEWWEYLSDVRKTYPLGYDAQHDGSLG PEFVIETLGKIAGPDAVYVAGVGQHQMWAAQFIKYENPRTWLNSGGLGTMGFAVPAAMGAKMARPEAEVWAIDGDGCFQM TNQELATCAIEGVPIKVALINNGNLGMVRQWQTLFYEERYSQTDLATHSRRIPDFVKLAEALGCVGLRCEREEDVAKVIE EARAINDRPVVIDFIVGADAQVWPMVAAGTSNDEIQAARGIRPLFDDDELVADE
Sequences:
>Translated_614_residues MSAPAKPKPASASGRAPGTAPEPNTVAPQRVTGAQSVVRSLEELGVEVIFGIPGGAVLPVYDPLYDSTKVRHVLVRHEQG AGHAASGYAHANGKVGVMMATSGPGATNLVTPLADAQMDSIPVVAITGQVGRGLIGTDAFQEADISGITMPITKHNFLVS NAEDIPKVIAEAFYIAQSGRPGAVLVDIPKDILQAQTTFSWPPQIYLPGYKPVTKPHGKQVREAVRLIAAAKRPVLYVGG GVIRADASPELKELAELTGIPVVTTLMARGAFPDSHELHMGMPGMHGTVGAVAALQRSDLLITLGARFDDRVTGQLDSFA PEAKVIHADIDPAEIGKNRHADVPIVGDVKNVIIELIEAIRADRAAGTVADPLSEWWEYLSDVRKTYPLGYDAQHDGSLG PEFVIETLGKIAGPDAVYVAGVGQHQMWAAQFIKYENPRTWLNSGGLGTMGFAVPAAMGAKMARPEAEVWAIDGDGCFQM TNQELATCAIEGVPIKVALINNGNLGMVRQWQTLFYEERYSQTDLATHSRRIPDFVKLAEALGCVGLRCEREEDVAKVIE EARAINDRPVVIDFIVGADAQVWPMVAAGTSNDEIQAARGIRPLFDDDELVADE >Mature_613_residues SAPAKPKPASASGRAPGTAPEPNTVAPQRVTGAQSVVRSLEELGVEVIFGIPGGAVLPVYDPLYDSTKVRHVLVRHEQGA GHAASGYAHANGKVGVMMATSGPGATNLVTPLADAQMDSIPVVAITGQVGRGLIGTDAFQEADISGITMPITKHNFLVSN AEDIPKVIAEAFYIAQSGRPGAVLVDIPKDILQAQTTFSWPPQIYLPGYKPVTKPHGKQVREAVRLIAAAKRPVLYVGGG VIRADASPELKELAELTGIPVVTTLMARGAFPDSHELHMGMPGMHGTVGAVAALQRSDLLITLGARFDDRVTGQLDSFAP EAKVIHADIDPAEIGKNRHADVPIVGDVKNVIIELIEAIRADRAAGTVADPLSEWWEYLSDVRKTYPLGYDAQHDGSLGP EFVIETLGKIAGPDAVYVAGVGQHQMWAAQFIKYENPRTWLNSGGLGTMGFAVPAAMGAKMARPEAEVWAIDGDGCFQMT NQELATCAIEGVPIKVALINNGNLGMVRQWQTLFYEERYSQTDLATHSRRIPDFVKLAEALGCVGLRCEREEDVAKVIEE ARAINDRPVVIDFIVGADAQVWPMVAAGTSNDEIQAARGIRPLFDDDELVADE
Specific function: Catalyzes the conversion of 2 pyruvate molecules into acetolactate in the first common step of the biosynthetic pathway of the branched-amino acids such as leucine, isoleucine, and valine. Also involved in condensing pyruvate and 2-ketobutyrate to form 2-
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI21361361, Length=596, Percent_Identity=27.5167785234899, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI93004078, Length=578, Percent_Identity=26.8166089965398, Blast_Score=176, Evalue=6e-44, Organism=Escherichia coli, GI87081685, Length=580, Percent_Identity=45.6896551724138, Blast_Score=520, Evalue=1e-148, Organism=Escherichia coli, GI1790104, Length=574, Percent_Identity=44.7735191637631, Blast_Score=468, Evalue=1e-133, Organism=Escherichia coli, GI1786717, Length=548, Percent_Identity=37.7737226277372, Blast_Score=348, Evalue=5e-97, Organism=Escherichia coli, GI1787096, Length=565, Percent_Identity=28.6725663716814, Blast_Score=199, Evalue=3e-52, Organism=Escherichia coli, GI1788716, Length=560, Percent_Identity=26.0714285714286, Blast_Score=161, Evalue=1e-40, Organism=Caenorhabditis elegans, GI17531299, Length=566, Percent_Identity=25.6183745583039, Blast_Score=157, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17531301, Length=566, Percent_Identity=25.6183745583039, Blast_Score=157, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17542570, Length=593, Percent_Identity=26.3069139966273, Blast_Score=156, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6323755, Length=629, Percent_Identity=42.2893481717011, Blast_Score=452, Evalue=1e-128, Organism=Saccharomyces cerevisiae, GI6320816, Length=488, Percent_Identity=23.5655737704918, Blast_Score=116, Evalue=8e-27, Organism=Saccharomyces cerevisiae, GI6323163, Length=500, Percent_Identity=24, Blast_Score=91, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6323073, Length=499, Percent_Identity=24.4488977955912, Blast_Score=88, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6321524, Length=499, Percent_Identity=21.6432865731463, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI19922626, Length=560, Percent_Identity=26.7857142857143, Blast_Score=179, Evalue=5e-45,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 65491; Mature: 65360
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPAKPKPASASGRAPGTAPEPNTVAPQRVTGAQSVVRSLEELGVEVIFGIPGGAVLPV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHCCEEEEEECCCCCEEEC YDPLYDSTKVRHVLVRHEQGAGHAASGYAHANGKVGVMMATSGPGATNLVTPLADAQMDS CCCCCCCHHHEEEEEEECCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCC IPVVAITGQVGRGLIGTDAFQEADISGITMPITKHNFLVSNAEDIPKVIAEAFYIAQSGR CCEEEEECCCCCCCCCCCCHHHCCCCCEEEEEECCCEEECCHHHHHHHHHHHHHHHCCCC PGAVLVDIPKDILQAQTTFSWPPQIYLPGYKPVTKPHGKQVREAVRLIAAAKRPVLYVGG CCEEEEECCHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC GVIRADASPELKELAELTGIPVVTTLMARGAFPDSHELHMGMPGMHGTVGAVAALQRSDL EEEEECCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHCCCE LITLGARFDDRVTGQLDSFAPEAKVIHADIDPAEIGKNRHADVPIVGDVKNVIIELIEAI EEEECCCCCCCCCCCHHHCCCCCEEEEECCCHHHCCCCCCCCCCEECCHHHHHHHHHHHH RADRAAGTVADPLSEWWEYLSDVRKTYPLGYDAQHDGSLGPEFVIETLGKIAGPDAVYVA HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEE GVGQHQMWAAQFIKYENPRTWLNSGGLGTMGFAVPAAMGAKMARPEAEVWAIDGDGCFQM ECCCHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEE TNQELATCAIEGVPIKVALINNGNLGMVRQWQTLFYEERYSQTDLATHSRRIPDFVKLAE CCHHHHHEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHH ALGCVGLRCEREEDVAKVIEEARAINDRPVVIDFIVGADAQVWPMVAAGTSNDEIQAARG HHCCCCCEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEECCCCCHHHHHHC IRPLFDDDELVADE CCCCCCCCCCCCCC >Mature Secondary Structure SAPAKPKPASASGRAPGTAPEPNTVAPQRVTGAQSVVRSLEELGVEVIFGIPGGAVLPV CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHCCEEEEEECCCCCEEEC YDPLYDSTKVRHVLVRHEQGAGHAASGYAHANGKVGVMMATSGPGATNLVTPLADAQMDS CCCCCCCHHHEEEEEEECCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCC IPVVAITGQVGRGLIGTDAFQEADISGITMPITKHNFLVSNAEDIPKVIAEAFYIAQSGR CCEEEEECCCCCCCCCCCCHHHCCCCCEEEEEECCCEEECCHHHHHHHHHHHHHHHCCCC PGAVLVDIPKDILQAQTTFSWPPQIYLPGYKPVTKPHGKQVREAVRLIAAAKRPVLYVGG CCEEEEECCHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC GVIRADASPELKELAELTGIPVVTTLMARGAFPDSHELHMGMPGMHGTVGAVAALQRSDL EEEEECCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHCCCE LITLGARFDDRVTGQLDSFAPEAKVIHADIDPAEIGKNRHADVPIVGDVKNVIIELIEAI EEEECCCCCCCCCCCHHHCCCCCEEEEECCCHHHCCCCCCCCCCEECCHHHHHHHHHHHH RADRAAGTVADPLSEWWEYLSDVRKTYPLGYDAQHDGSLGPEFVIETLGKIAGPDAVYVA HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEE GVGQHQMWAAQFIKYENPRTWLNSGGLGTMGFAVPAAMGAKMARPEAEVWAIDGDGCFQM ECCCHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEE TNQELATCAIEGVPIKVALINNGNLGMVRQWQTLFYEERYSQTDLATHSRRIPDFVKLAE CCHHHHHEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHH ALGCVGLRCEREEDVAKVIEEARAINDRPVVIDFIVGADAQVWPMVAAGTSNDEIQAARG HHCCCCCEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEECCCCCHHHHHHC IRPLFDDDELVADE CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]