| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630406
Identifier: 169630406
GI number: 169630406
Start: 3370591
End: 3371820
Strand: Reverse
Name: 169630406
Synonym: MAB_3325c
Alternate gene names: NA
Gene position: 3371820-3370591 (Counterclockwise)
Preceding gene: 169630407
Following gene: 169630404
Centisome position: 66.54
GC content: 66.02
Gene sequence:
>1230_bases ATGCGAATACTGATCGTGGGCGCCGGGGGAGTGGGTAGTGCGGCCGCCTTCATCGCGGCGCGGCGGGATTTCTTCGAGGC CCTGGTGATCGCGGATTACGACATCGCGCGAGCGCAGGCGGTGGTGGACCGTCTCGGAGATTCCCGATTCATGGCGGCCC GGATCGACGCCTCCTGCGCCGACGATGTGACCGCGCTGTGCCGAGAACACCGAATCACCCACGCGCTCAACGCGGTCGAT CCCCGCTTCGTCATGAGTGTGTTCGACGGCTGTTTCGCGGCAGGGGTGACCTACCTCGACATGGCGATGAGTCTGTCGCA TCGTCATCCGGACAAGCCCTACGAGCTGCCCGGCGTCATGCTGGGAGATGAGCAGTTCGCGGCCACCGAAAAGTGGAAGG CCGCAGGGCTGTTGGCGTTGGTGGGCATCGGTGTGGAGCCGGGTCTCAGTGATGTGTTCGCGCGGTACGCCGCCGATCAC CTGTTCTCCGAGATCGACGAGTTGGGTACCCGGGACGGCTCCAACCTGGAGGTGCGGGGGTATCGGTTCGCCCCTTCGTT CTCCATCTGGACCACCATCGAGGAATGCCTCAACCCGCCCCTTATCTGGGAACGCGGCAAGGGATTCTTCACCACCGAAC CCTTCAGTGAGCCTGAGGTTTTCGATTTCCCGGGCGGTATCGGCCCTGTCGAGTGCGTCAACGTCGAGCATGAGGAAGTG GTGCTCATGCCGCGCTGGGTCAACGCCCGGCGGGTCACGTTCAAGTACGGGCTCGGTGCCGAGTTCATCAACGTGCTGCG CACCCTGCACCTGGTCGGTTTGGACAGCACCGCCCCGGTGAGTGTGCACGCCAACGGCGGCACCGCGGCCGTCAGCCCAC GCGATGTGGTGGCCGCATGCTTACCCGATCCGGCTGGGCTCGGGCACCTGATGCGTGGCGCCACCTGTGCTGGTCTCTGG GTCACCGGCACCGGCAAAGACGGTCGGCCCCGGGAGGTCTATCTGCACCATGTCGTCGACAACGAATGGACGATGGCCCG CGATGGCGCGCAATGCGTGGTGTGGCAGACCGCGGTGAACCCGGTGGTGGCTCTGGAGCTGCTGGCCGAGGGCGTGTGGA GCGGCGCCGGTGTGTTGGGGCCGGAGGCGTTCGACAGCCTGCCGTTCCTGGATCGGCTCAATACGTTCGGGGCGCCCTGG GGCATCCAGGAGCGGGCGGTCGCCGCCTAG
Upstream 100 bases:
>100_bases TTCAGCTTGCGCCACCGTTGATCAGCGGGCCCCGAGAATTCGAAGCGATCGAGCAGATTCTGCGTGGTGTGCTCACCGAA GCCTGGGCCCGGTTATAGCC
Downstream 100 bases:
>100_bases TCGCGCCTGACGCCCTCGTAGGGATTAGGGACGCGGCCATTGCTGGCGGCGGACAGGATCGGCAGGGTGGAGAAGGTGAC GCCGGGAAACCGGATGGTGC
Product: saccharopine dehydrogenase
Products: NA
Alternate protein names: Carboxynorspermidine Dehydrogenase; Saccharopine Dehydrogenase-Like Protein; Saccharopine Dehydrogenase Family Protein; Acyl Carrier Protein; Carboxynorspermide Hydratase
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MRILIVGAGGVGSAAAFIAARRDFFEALVIADYDIARAQAVVDRLGDSRFMAARIDASCADDVTALCREHRITHALNAVD PRFVMSVFDGCFAAGVTYLDMAMSLSHRHPDKPYELPGVMLGDEQFAATEKWKAAGLLALVGIGVEPGLSDVFARYAADH LFSEIDELGTRDGSNLEVRGYRFAPSFSIWTTIEECLNPPLIWERGKGFFTTEPFSEPEVFDFPGGIGPVECVNVEHEEV VLMPRWVNARRVTFKYGLGAEFINVLRTLHLVGLDSTAPVSVHANGGTAAVSPRDVVAACLPDPAGLGHLMRGATCAGLW VTGTGKDGRPREVYLHHVVDNEWTMARDGAQCVVWQTAVNPVVALELLAEGVWSGAGVLGPEAFDSLPFLDRLNTFGAPW GIQERAVAA
Sequences:
>Translated_409_residues MRILIVGAGGVGSAAAFIAARRDFFEALVIADYDIARAQAVVDRLGDSRFMAARIDASCADDVTALCREHRITHALNAVD PRFVMSVFDGCFAAGVTYLDMAMSLSHRHPDKPYELPGVMLGDEQFAATEKWKAAGLLALVGIGVEPGLSDVFARYAADH LFSEIDELGTRDGSNLEVRGYRFAPSFSIWTTIEECLNPPLIWERGKGFFTTEPFSEPEVFDFPGGIGPVECVNVEHEEV VLMPRWVNARRVTFKYGLGAEFINVLRTLHLVGLDSTAPVSVHANGGTAAVSPRDVVAACLPDPAGLGHLMRGATCAGLW VTGTGKDGRPREVYLHHVVDNEWTMARDGAQCVVWQTAVNPVVALELLAEGVWSGAGVLGPEAFDSLPFLDRLNTFGAPW GIQERAVAA >Mature_409_residues MRILIVGAGGVGSAAAFIAARRDFFEALVIADYDIARAQAVVDRLGDSRFMAARIDASCADDVTALCREHRITHALNAVD PRFVMSVFDGCFAAGVTYLDMAMSLSHRHPDKPYELPGVMLGDEQFAATEKWKAAGLLALVGIGVEPGLSDVFARYAADH LFSEIDELGTRDGSNLEVRGYRFAPSFSIWTTIEECLNPPLIWERGKGFFTTEPFSEPEVFDFPGGIGPVECVNVEHEEV VLMPRWVNARRVTFKYGLGAEFINVLRTLHLVGLDSTAPVSVHANGGTAAVSPRDVVAACLPDPAGLGHLMRGATCAGLW VTGTGKDGRPREVYLHHVVDNEWTMARDGAQCVVWQTAVNPVVALELLAEGVWSGAGVLGPEAFDSLPFLDRLNTFGAPW GIQERAVAA
Specific function: Unknown
COG id: COG1748
COG function: function code E; Saccharopine dehydrogenase and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44157; Mature: 44157
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILIVGAGGVGSAAAFIAARRDFFEALVIADYDIARAQAVVDRLGDSRFMAARIDASCA CEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCHH DDVTALCREHRITHALNAVDPRFVMSVFDGCFAAGVTYLDMAMSLSHRHPDKPYELPGVM HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE LGDEQFAATEKWKAAGLLALVGIGVEPGLSDVFARYAADHLFSEIDELGTRDGSNLEVRG ECCHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE YRFAPSFSIWTTIEECLNPPLIWERGKGFFTTEPFSEPEVFDFPGGIGPVECVNVEHEEV EEECCCCHHHHHHHHHCCCCEEEECCCCCEECCCCCCCCCEECCCCCCCEEEECCCCCEE VLMPRWVNARRVTFKYGLGAEFINVLRTLHLVGLDSTAPVSVHANGGTAAVSPRDVVAAC EEEECCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCEEEECCCCEEECCHHHHHHHH LPDPAGLGHLMRGATCAGLWVTGTGKDGRPREVYLHHVVDNEWTMARDGAQCVVWQTAVN CCCCCCHHHHHCCCEEEEEEEEECCCCCCCCEEEEEEEECCCEEEECCCCEEEEEECCCC PVVALELLAEGVWSGAGVLGPEAFDSLPFLDRLNTFGAPWGIQERAVAA HHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MRILIVGAGGVGSAAAFIAARRDFFEALVIADYDIARAQAVVDRLGDSRFMAARIDASCA CEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCHH DDVTALCREHRITHALNAVDPRFVMSVFDGCFAAGVTYLDMAMSLSHRHPDKPYELPGVM HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE LGDEQFAATEKWKAAGLLALVGIGVEPGLSDVFARYAADHLFSEIDELGTRDGSNLEVRG ECCHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE YRFAPSFSIWTTIEECLNPPLIWERGKGFFTTEPFSEPEVFDFPGGIGPVECVNVEHEEV EEECCCCHHHHHHHHHCCCCEEEECCCCCEECCCCCCCCCEECCCCCCCEEEECCCCCEE VLMPRWVNARRVTFKYGLGAEFINVLRTLHLVGLDSTAPVSVHANGGTAAVSPRDVVAAC EEEECCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCEEEECCCCEEECCHHHHHHHH LPDPAGLGHLMRGATCAGLWVTGTGKDGRPREVYLHHVVDNEWTMARDGAQCVVWQTAVN CCCCCCHHHHHCCCEEEEEEEEECCCCCCCCEEEEEEEECCCEEEECCCCEEEEEECCCC PVVALELLAEGVWSGAGVLGPEAFDSLPFLDRLNTFGAPWGIQERAVAA HHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA