| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630392
Identifier: 169630392
GI number: 169630392
Start: 3349718
End: 3350257
Strand: Reverse
Name: 169630392
Synonym: MAB_3311c
Alternate gene names: NA
Gene position: 3350257-3349718 (Counterclockwise)
Preceding gene: 169630394
Following gene: 169630391
Centisome position: 66.12
GC content: 65.19
Gene sequence:
>540_bases ATGTCACGTCTGACCACCCCTGCCTCGGAAGACATCACCGCAGAGGCGGAGAGCGCCCTGGGCACTGTCGGTAGGCAGTT CGGCTTCGTACCGAACATGTTCGCGATGCTCGCGTCGAATCCGGCAGTCCTGGATGTCGTCATGTCCTTGCAGGGCAGCC TGGGGCGAGTGCTGGATGCCAAGACCCGCCACACCATCGCGCTCGCGGTATCCGAAGCCAACGGCTGCGACTACTGCCTG GCGGTGCACTCGTACGTATCGGCCGAACTCGGTGGCATGTCGAGCGACGACATCGACCTGGCGCGATCGGGAAGCTCGAT CGACCCCAAGCGGGCCGCCGTCGCGCGCTTCGCTCAGCGGGTGGTCGAAACCCGTGGGAAGGTCGGCGATTCCGATCTGG CCGCCGTGCGGGGCGCCGGCTACGCGGACTCGCAGATCTTGGCGATTGTCACCGTCGCCGTTCAGACCCTGCTGACCAAC TACATCAACAATGTCAACCAAACCGTCATCGACATCCCGGCGGCCGGCACCGCCGCGTGA
Upstream 100 bases:
>100_bases AAAATTGGGCTTGACAGCCCAATTCTATAGGTGTTCACTTCAGGAGTGGGCTAAACAGCCCAGAAAATCCATGCACACAC CTACTGGAGGTTGATCCGCC
Downstream 100 bases:
>100_bases CGCTCAAACACCTTGCAAGGAAAGTAAATTGACATGAACCTCGACAACCTCATGAGTAAGCACCTCACGAGATATTTCGA CTCCAGCAAGACCATTCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Alkylhydroperoxidase AhpD Core; Alkylhydroperoxidase Like Protein AhpD Family; Carboxymuconolactone Decarboxylase; Peroxidase-Related; Alkylhydroperoxidase AhpD Family Core Domain Protein; Carboxymuconolactone Decarboxylase Family Protein; Alkylhydroperoxidase-Like Protein AhpD Family; MIP-(Macrophage Infectivity Potentiator)-Like Protein; Alpha/Beta Hydrolase; 24 KDa Macrophage-Induced Protein; AhpD-Like Alkylhydroperoxidase; Carboxymuconolactone Decarboxylase Family; Alkylhydroperoxidase AhpD; Macrophage Infectivity Potentiator Protein; Macrophage Infectivity Potentiator-Related Protein; Antioxydant Protein; Alkylhydroperoxidase-Like Protein; Peroxidase; Peroxidase-Like Protein; Alkylhydroperoxidase Like Protein AhpD Family Protein; Ypothetical Protein SMU.
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MSRLTTPASEDITAEAESALGTVGRQFGFVPNMFAMLASNPAVLDVVMSLQGSLGRVLDAKTRHTIALAVSEANGCDYCL AVHSYVSAELGGMSSDDIDLARSGSSIDPKRAAVARFAQRVVETRGKVGDSDLAAVRGAGYADSQILAIVTVAVQTLLTN YINNVNQTVIDIPAAGTAA
Sequences:
>Translated_179_residues MSRLTTPASEDITAEAESALGTVGRQFGFVPNMFAMLASNPAVLDVVMSLQGSLGRVLDAKTRHTIALAVSEANGCDYCL AVHSYVSAELGGMSSDDIDLARSGSSIDPKRAAVARFAQRVVETRGKVGDSDLAAVRGAGYADSQILAIVTVAVQTLLTN YINNVNQTVIDIPAAGTAA >Mature_178_residues SRLTTPASEDITAEAESALGTVGRQFGFVPNMFAMLASNPAVLDVVMSLQGSLGRVLDAKTRHTIALAVSEANGCDYCLA VHSYVSAELGGMSSDDIDLARSGSSIDPKRAAVARFAQRVVETRGKVGDSDLAAVRGAGYADSQILAIVTVAVQTLLTNY INNVNQTVIDIPAAGTAA
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18546; Mature: 18415
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLTTPASEDITAEAESALGTVGRQFGFVPNMFAMLASNPAVLDVVMSLQGSLGRVLDA CCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC KTRHTIALAVSEANGCDYCLAVHSYVSAELGGMSSDDIDLARSGSSIDPKRAAVARFAQR CCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHH VVETRGKVGDSDLAAVRGAGYADSQILAIVTVAVQTLLTNYINNVNQTVIDIPAAGTAA HHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC >Mature Secondary Structure SRLTTPASEDITAEAESALGTVGRQFGFVPNMFAMLASNPAVLDVVMSLQGSLGRVLDA CCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC KTRHTIALAVSEANGCDYCLAVHSYVSAELGGMSSDDIDLARSGSSIDPKRAAVARFAQR CCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHH VVETRGKVGDSDLAAVRGAGYADSQILAIVTVAVQTLLTNYINNVNQTVIDIPAAGTAA HHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA