| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is gltX
Identifier: 169630379
GI number: 169630379
Start: 3336060
End: 3337550
Strand: Reverse
Name: gltX
Synonym: MAB_3298c
Alternate gene names: 169630379
Gene position: 3337550-3336060 (Counterclockwise)
Preceding gene: 169630380
Following gene: 169630375
Centisome position: 65.87
GC content: 64.39
Gene sequence:
>1491_bases GTGAGTAACACGAAAATCCGGGTACGTTTCTGCCCGTCGCCGACGGGCACGCCGCACGTCGGCCTGATTCGCACCGCACT GTTCAACTGGGCGTATGCGCGACACTGCGGTGGGGACTTCGTGTTCCGCATCGAAGACACCGATGCCGGACGCGACAGTG AGGAGAGCTACCTGGCGATCCTGGATGCCTTGCGATGGCTGGGGCTGGACTGGGACGAAGGGCCGGAGGTCGGCGGACCC TACGAGCCCTACCGACAGTCACAGCGTAAGGAGCTGCATCGGGAGGTGGTGCGCAAGCTCCTGGAGGCGGGGGAGGCCTA TGAGGCATTCTCCACGGCGGAGGAAGTCGAAGCCCGCCATCTTGCCGCGGGACGCAATCCCAAACTGGGCTATGACAACT ATGACCGTGATCTCACCGAGGAGCAGCGCGCGGCATTCCGTGCGGAGGGACGCGATCCCGTCGTCCGGCTGCGGATGCCC GATCACGACATCACCTGGAACGACTTGGTGCGCGGCGAGACCACCTTCGCGGCGGGTGTGGTGCCTGATTTTGCGCTGAC CCGCGGTAACGGGGATCCGTTGTACACCTTGGTGAACCCGGTCGACGACGCGTTGATGAAGATCACCCATGTGCTGCGCG GCGAGGACCTGCTGCCCTCGACACCGCGGCAGATCGCTTTGTACGAGGCCATGATCCGGATCGGAGTGACCGACTCGATA CCGGCCTTCGCGCACCTGCCGTCGGTGCTGGGGGAGGGCACGAAGAAGCTGTCCAAGCGTGATCCGCAGTCCAACCTGTT TCTTCATCGCGATCGCGGATTCATTCCCGAGGGTCTGCTGAATTACCTTGCCCTGCTGGGGTGGTCGATCGCCGATGATC ACGACATCTTCTCACTTGCCGAGATGGTCACCGCCTTCGATGTCACCGATGTCAACTCGAATCCGGCGCGATTCGACCAG AAGAAGGCCGATGCCATCAACGCCGAGCACATCCGGCTGTTGGCGCCGGAGGAGTTCGTGACCCGGCTGCGCACGTACTT CGCCGCGCATGGGCACGAGCTCGGGCTCGACGAGAGCGCCTTCGCGGTGGCGGCGGATCTGGTGCAGACGCGCATCGTGG TGCTGGGCGACGCCTGGGGGCTGCTGAAGTTCCTCAACGACGACGCGTACGCGATCGACCCGGGCGCGGCCCGCAAGGAA CTCGGAGAGGCCTCGTTGCCTGTCCTGGACGCCGCAATCGGTGCGCTGGAGTCACTCGAGGCGTGGACCACCCCTGCCAT CGAGGGTGCGCTCAAGAGCGCACTCATCGAAGGGCTCGAGCTCAAACCGCGGAAGGCTTTCGGCCCGCTGCGTGTCGCGG TTACGGGTGCAACGGTGAGCCCGCCGCTGTTCGAATCGATGGAGCTGCTGGGTTCCGGGCGCACCCTGACACGGCTGAGA AACGCTCGGAGCTGGGAAAATGGGGTGGGTGACCAGACCGATTCGGGTTAA
Upstream 100 bases:
>100_bases CCGAGGGCGTCGGGCCCATTGTCGACGGGGACACCGTGAGCGTCACTATCGAAGGTATCGGAACCCTGTCCAATCCCGTT GTGCGGAAGGCGAAGTAAGA
Downstream 100 bases:
>100_bases TGGCCCTTGGTTTGGTACTCTGCTCGTCGGCTCCAAAGTCCGCTATCAGCTCGCTGACCTGCGGTTCTGCGAAGCCATTG GGGTATGGTGTAATTGGCAA
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MSNTKIRVRFCPSPTGTPHVGLIRTALFNWAYARHCGGDFVFRIEDTDAGRDSEESYLAILDALRWLGLDWDEGPEVGGP YEPYRQSQRKELHREVVRKLLEAGEAYEAFSTAEEVEARHLAAGRNPKLGYDNYDRDLTEEQRAAFRAEGRDPVVRLRMP DHDITWNDLVRGETTFAAGVVPDFALTRGNGDPLYTLVNPVDDALMKITHVLRGEDLLPSTPRQIALYEAMIRIGVTDSI PAFAHLPSVLGEGTKKLSKRDPQSNLFLHRDRGFIPEGLLNYLALLGWSIADDHDIFSLAEMVTAFDVTDVNSNPARFDQ KKADAINAEHIRLLAPEEFVTRLRTYFAAHGHELGLDESAFAVAADLVQTRIVVLGDAWGLLKFLNDDAYAIDPGAARKE LGEASLPVLDAAIGALESLEAWTTPAIEGALKSALIEGLELKPRKAFGPLRVAVTGATVSPPLFESMELLGSGRTLTRLR NARSWENGVGDQTDSG
Sequences:
>Translated_496_residues MSNTKIRVRFCPSPTGTPHVGLIRTALFNWAYARHCGGDFVFRIEDTDAGRDSEESYLAILDALRWLGLDWDEGPEVGGP YEPYRQSQRKELHREVVRKLLEAGEAYEAFSTAEEVEARHLAAGRNPKLGYDNYDRDLTEEQRAAFRAEGRDPVVRLRMP DHDITWNDLVRGETTFAAGVVPDFALTRGNGDPLYTLVNPVDDALMKITHVLRGEDLLPSTPRQIALYEAMIRIGVTDSI PAFAHLPSVLGEGTKKLSKRDPQSNLFLHRDRGFIPEGLLNYLALLGWSIADDHDIFSLAEMVTAFDVTDVNSNPARFDQ KKADAINAEHIRLLAPEEFVTRLRTYFAAHGHELGLDESAFAVAADLVQTRIVVLGDAWGLLKFLNDDAYAIDPGAARKE LGEASLPVLDAAIGALESLEAWTTPAIEGALKSALIEGLELKPRKAFGPLRVAVTGATVSPPLFESMELLGSGRTLTRLR NARSWENGVGDQTDSG >Mature_495_residues SNTKIRVRFCPSPTGTPHVGLIRTALFNWAYARHCGGDFVFRIEDTDAGRDSEESYLAILDALRWLGLDWDEGPEVGGPY EPYRQSQRKELHREVVRKLLEAGEAYEAFSTAEEVEARHLAAGRNPKLGYDNYDRDLTEEQRAAFRAEGRDPVVRLRMPD HDITWNDLVRGETTFAAGVVPDFALTRGNGDPLYTLVNPVDDALMKITHVLRGEDLLPSTPRQIALYEAMIRIGVTDSIP AFAHLPSVLGEGTKKLSKRDPQSNLFLHRDRGFIPEGLLNYLALLGWSIADDHDIFSLAEMVTAFDVTDVNSNPARFDQK KADAINAEHIRLLAPEEFVTRLRTYFAAHGHELGLDESAFAVAADLVQTRIVVLGDAWGLLKFLNDDAYAIDPGAARKEL GEASLPVLDAAIGALESLEAWTTPAIEGALKSALIEGLELKPRKAFGPLRVAVTGATVSPPLFESMELLGSGRTLTRLRN ARSWENGVGDQTDSG
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI134288884, Length=499, Percent_Identity=34.2685370741483, Blast_Score=213, Evalue=4e-55, Organism=Escherichia coli, GI1788743, Length=485, Percent_Identity=35.4639175257732, Blast_Score=271, Evalue=7e-74, Organism=Escherichia coli, GI226510925, Length=265, Percent_Identity=30.5660377358491, Blast_Score=92, Evalue=5e-20, Organism=Caenorhabditis elegans, GI71993394, Length=485, Percent_Identity=28.659793814433, Blast_Score=195, Evalue=4e-50, Organism=Saccharomyces cerevisiae, GI6324540, Length=347, Percent_Identity=36.5994236311239, Blast_Score=206, Evalue=5e-54, Organism=Drosophila melanogaster, GI24665321, Length=498, Percent_Identity=31.7269076305221, Blast_Score=210, Evalue=1e-54,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE_MYCA9 (B1MDQ5)
Other databases:
- EMBL: CU458896 - RefSeq: YP_001704028.1 - ProteinModelPortal: B1MDQ5 - SMR: B1MDQ5 - EnsemblBacteria: EBMYCT00000007050 - GeneID: 5967485 - GenomeReviews: CU458896_GR - KEGG: mab:MAB_3298c - GeneTree: EBGT00050000016746 - HOGENOM: HBG628189 - OMA: LPYVMGQ - ProtClustDB: PRK01406 - BioCyc: MABS561007:MAB_3298C-MONOMER - GO: GO:0005737 - HAMAP: MF_00022_B - InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - Gene3D: G3DSA:1.10.10.350 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00464
Pfam domain/function: PF00749 tRNA-synt_1c; SSF48163 tRNA-synt_bind
EC number: =6.1.1.17
Molecular weight: Translated: 54711; Mature: 54580
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 259-259
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNTKIRVRFCPSPTGTPHVGLIRTALFNWAYARHCGGDFVFRIEDTDAGRDSEESYLAI CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHH LDALRWLGLDWDEGPEVGGPYEPYRQSQRKELHREVVRKLLEAGEAYEAFSTAEEVEARH HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LAAGRNPKLGYDNYDRDLTEEQRAAFRAEGRDPVVRLRMPDHDITWNDLVRGETTFAAGV HHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCCEECCC VPDFALTRGNGDPLYTLVNPVDDALMKITHVLRGEDLLPSTPRQIALYEAMIRIGVTDSI CCCCEEECCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCC PAFAHLPSVLGEGTKKLSKRDPQSNLFLHRDRGFIPEGLLNYLALLGWSIADDHDIFSLA CHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHH EMVTAFDVTDVNSNPARFDQKKADAINAEHIRLLAPEEFVTRLRTYFAAHGHELGLDESA HHHHHHCEECCCCCCCHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCHHH FAVAADLVQTRIVVLGDAWGLLKFLNDDAYAIDPGAARKELGEASLPVLDAAIGALESLE HHHHHHHHHHEEEEEECHHHHHHHHCCCCEEECCCHHHHHHCCCCCHHHHHHHHHHHHHH AWTTPAIEGALKSALIEGLELKPRKAFGPLRVAVTGATVSPPLFESMELLGSGRTLTRLR HHCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCHHHHHH NARSWENGVGDQTDSG HHCCHHCCCCCCCCCC >Mature Secondary Structure SNTKIRVRFCPSPTGTPHVGLIRTALFNWAYARHCGGDFVFRIEDTDAGRDSEESYLAI CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHH LDALRWLGLDWDEGPEVGGPYEPYRQSQRKELHREVVRKLLEAGEAYEAFSTAEEVEARH HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LAAGRNPKLGYDNYDRDLTEEQRAAFRAEGRDPVVRLRMPDHDITWNDLVRGETTFAAGV HHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCCEECCC VPDFALTRGNGDPLYTLVNPVDDALMKITHVLRGEDLLPSTPRQIALYEAMIRIGVTDSI CCCCEEECCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCC PAFAHLPSVLGEGTKKLSKRDPQSNLFLHRDRGFIPEGLLNYLALLGWSIADDHDIFSLA CHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHH EMVTAFDVTDVNSNPARFDQKKADAINAEHIRLLAPEEFVTRLRTYFAAHGHELGLDESA HHHHHHCEECCCCCCCHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCHHH FAVAADLVQTRIVVLGDAWGLLKFLNDDAYAIDPGAARKELGEASLPVLDAAIGALESLE HHHHHHHHHHEEEEEECHHHHHHHHCCCCEEECCCHHHHHHCCCCCHHHHHHHHHHHHHH AWTTPAIEGALKSALIEGLELKPRKAFGPLRVAVTGATVSPPLFESMELLGSGRTLTRLR HHCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCHHHHHH NARSWENGVGDQTDSG HHCCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA