| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is yghX [H]
Identifier: 169630346
GI number: 169630346
Start: 3302277
End: 3303170
Strand: Reverse
Name: yghX [H]
Synonym: MAB_3265c
Alternate gene names: 169630346
Gene position: 3303170-3302277 (Counterclockwise)
Preceding gene: 169630347
Following gene: 169630345
Centisome position: 65.19
GC content: 67.79
Gene sequence:
>894_bases ATGACCCCGCTGCAGCGATATATCGCCGAAGAGATCGCCACGGACCATATCGAGGGACTGCTGACGCGGCGGGAGGCCTT TCGGCGGCTCGCCCTGCTGGGCGTGGGCGCCACCGCTGCCGGCGCGCTGATCTCGGCGTGTGGCACCGGGAACAAGCCGG TCGCTGCGCCCGCGCCCGCCAACTCCGGGGCGCCACCGCCTGGCATGGATAACGTCGTGGTGACAGAGCCGATTACCTGG CGTGGCCCCAACGGAACGTTGCAAGGTGCCTGGGCGACGGCAGCGGAGCCTCGCGGCACGGTATTGGTGATTCACGAGAA CAAGGGGCTCAACGACTGGGTTCGGTCCGTCGCGGGACGGCTTGCGGGCGTCGGATATTCGTCGCTGGCCATCGACCTGT TGTCGGAAGAGGGTGGTGCGTCCGCGTTTAAGGACCCGGCCGAGGCGACGGGAACACTGGGCAGGATCGCGCCGGAAAGA TTTATCGCTGACCTGAAGTCCGGAGTGGACGAGATTCTGCGACGGGTTCCCGGCAAGCCCGCCGGCGCGGTCGGATTCTG CTTCGGCGGCGGCCTGGTTTGGCAGCTGCTGGCGGCGGGAGAGCCGAGACTGGCCGCCGCTGCCCCGTTTTATGGTCCGC TTCCGGACAATCCTGATTTTTCACGATCCAAGGCCGCGGTCCTGGCCTTCTACGGAGAGCTCGACGAGCGCGTCACGGCG TCCAAAGATCAGGCCGCCGACGCCCTGCGGCGGGGCGGGCTGCTGCATGAGATCGCCGTCGAACCGGGCGCCGATCACGC CTTCTTCAACGACAGCGGACCGCGCTACAACGCGTCCGCGGCGGTGGATGCCTGGCAACGCCTCCTCGGGTGGCTCGGCC AGCACATCGGCTAG
Upstream 100 bases:
>100_bases TGTCCCGCAAGTACGGCGGCACCCGGCTAGAGCTGGGATCCCTGTAAGCGTCCAGGCGATCCACAGCCACCGTTTACTTG TCGAGCGCAGACTGCTCGTC
Downstream 100 bases:
>100_bases ATGGCACCTAGACTGGCCGGTCGTGTGGTGTAGAGCGGTAGTGGTGGCGGTGGCTTCCGGCGCGGTGTCGCTGGCTGCCG CCGGGGTCGCGTTGGCCGAT
Product: hypothetical protein
Products: oxohex-2-enedioate [C]
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MTPLQRYIAEEIATDHIEGLLTRREAFRRLALLGVGATAAGALISACGTGNKPVAAPAPANSGAPPPGMDNVVVTEPITW RGPNGTLQGAWATAAEPRGTVLVIHENKGLNDWVRSVAGRLAGVGYSSLAIDLLSEEGGASAFKDPAEATGTLGRIAPER FIADLKSGVDEILRRVPGKPAGAVGFCFGGGLVWQLLAAGEPRLAAAAPFYGPLPDNPDFSRSKAAVLAFYGELDERVTA SKDQAADALRRGGLLHEIAVEPGADHAFFNDSGPRYNASAAVDAWQRLLGWLGQHIG
Sequences:
>Translated_297_residues MTPLQRYIAEEIATDHIEGLLTRREAFRRLALLGVGATAAGALISACGTGNKPVAAPAPANSGAPPPGMDNVVVTEPITW RGPNGTLQGAWATAAEPRGTVLVIHENKGLNDWVRSVAGRLAGVGYSSLAIDLLSEEGGASAFKDPAEATGTLGRIAPER FIADLKSGVDEILRRVPGKPAGAVGFCFGGGLVWQLLAAGEPRLAAAAPFYGPLPDNPDFSRSKAAVLAFYGELDERVTA SKDQAADALRRGGLLHEIAVEPGADHAFFNDSGPRYNASAAVDAWQRLLGWLGQHIG >Mature_296_residues TPLQRYIAEEIATDHIEGLLTRREAFRRLALLGVGATAAGALISACGTGNKPVAAPAPANSGAPPPGMDNVVVTEPITWR GPNGTLQGAWATAAEPRGTVLVIHENKGLNDWVRSVAGRLAGVGYSSLAIDLLSEEGGASAFKDPAEATGTLGRIAPERF IADLKSGVDEILRRVPGKPAGAVGFCFGGGLVWQLLAAGEPRLAAAAPFYGPLPDNPDFSRSKAAVLAFYGELDERVTAS KDQAADALRRGGLLHEIAVEPGADHAFFNDSGPRYNASAAVDAWQRLLGWLGQHIG
Specific function: Unknown
COG id: COG0412
COG function: function code Q; Dienelactone hydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI48994982, Length=215, Percent_Identity=33.4883720930233, Blast_Score=97, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002925 [H]
Pfam domain/function: PF01738 DLH [H]
EC number: 3.1.1.45 [C]
Molecular weight: Translated: 30932; Mature: 30801
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLQRYIAEEIATDHIEGLLTRREAFRRLALLGVGATAAGALISACGTGNKPVAAPAPA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCC NSGAPPPGMDNVVVTEPITWRGPNGTLQGAWATAAEPRGTVLVIHENKGLNDWVRSVAGR CCCCCCCCCCCEEEECCEEEECCCCCCCCCEECCCCCCCEEEEEECCCCHHHHHHHHHHH LAGVGYSSLAIDLLSEEGGASAFKDPAEATGTLGRIAPERFIADLKSGVDEILRRVPGKP HHCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC AGAVGFCFGGGLVWQLLAAGEPRLAAAAPFYGPLPDNPDFSRSKAAVLAFYGELDERVTA CCCEEHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC SKDQAADALRRGGLLHEIAVEPGADHAFFNDSGPRYNASAAVDAWQRLLGWLGQHIG CHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TPLQRYIAEEIATDHIEGLLTRREAFRRLALLGVGATAAGALISACGTGNKPVAAPAPA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCC NSGAPPPGMDNVVVTEPITWRGPNGTLQGAWATAAEPRGTVLVIHENKGLNDWVRSVAGR CCCCCCCCCCCEEEECCEEEECCCCCCCCCEECCCCCCCEEEEEECCCCHHHHHHHHHHH LAGVGYSSLAIDLLSEEGGASAFKDPAEATGTLGRIAPERFIADLKSGVDEILRRVPGKP HHCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC AGAVGFCFGGGLVWQLLAAGEPRLAAAAPFYGPLPDNPDFSRSKAAVLAFYGELDERVTA CCCEEHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC SKDQAADALRRGGLLHEIAVEPGADHAFFNDSGPRYNASAAVDAWQRLLGWLGQHIG CHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-carboxymethylenebut-2-en-4-olide; H2O [C]
Specific reaction: 4-carboxymethylenebut-2-en-4-olide + H2O = 4 oxohex-2-enedioate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]