| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630345
Identifier: 169630345
GI number: 169630345
Start: 3301715
End: 3302236
Strand: Reverse
Name: 169630345
Synonym: MAB_3264c
Alternate gene names: NA
Gene position: 3302236-3301715 (Counterclockwise)
Preceding gene: 169630346
Following gene: 169630344
Centisome position: 65.17
GC content: 70.11
Gene sequence:
>522_bases GTGGTGGCGGTGGCTTCCGGCGCGGTGTCGCTGGCTGCCGCCGGGGTCGCGTTGGCCGATGATGGCGATGCGCCGGCTCC GCCCACTCCTCAGTCGCCGGTGGCCGACTTGCTGCCCGGAGGCGCGAAGACAGCGGTGGCACCGTCGGTGGCCAGCGATG CGCTGTCTGCCGGATTGCCGGCGCCGGTCGCGGGGTTGGGGGCACCCGGTGGGCCGTTGTCGGCCGAGGGACCGCTGTTG TCGCCCACGGGCCCGCTGTCGGCCAACGGGCCCCTGACGGCCTCCGGCGGTCCGTTATCGGCTGATGGCCCGGTACTTTC ACCGACCAGTCCGGTGTCACCCGTCAACGAGATTTGCGGATCGGGTTCGCTGCTGAAGTCCGTGACCGACAGATTCTCGG GAGTGATCCCCGAGAGCACACTGGCCTCGATGCAGAATCAGCACCCCGTCGGCACCGCAAAGTGCCCCGCGGCGCCGACG GCAGATGATCAAGCTCCGCCCGCCGATCAACCCGGGAATTAG
Upstream 100 bases:
>100_bases TCCGCGGCGGTGGATGCCTGGCAACGCCTCCTCGGGTGGCTCGGCCAGCACATCGGCTAGATGGCACCTAGACTGGCCGG TCGTGTGGTGTAGAGCGGTA
Downstream 100 bases:
>100_bases TCGCTCGGTAATCTGCGGCGGTGCGGTTCTGTGATCGGGGGATCACCCGTTTCCTCGCCGAGCCCCCTCTGCCAACCATT CTTGGCTTACTTGATTCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MVAVASGAVSLAAAGVALADDGDAPAPPTPQSPVADLLPGGAKTAVAPSVASDALSAGLPAPVAGLGAPGGPLSAEGPLL SPTGPLSANGPLTASGGPLSADGPVLSPTSPVSPVNEICGSGSLLKSVTDRFSGVIPESTLASMQNQHPVGTAKCPAAPT ADDQAPPADQPGN
Sequences:
>Translated_173_residues MVAVASGAVSLAAAGVALADDGDAPAPPTPQSPVADLLPGGAKTAVAPSVASDALSAGLPAPVAGLGAPGGPLSAEGPLL SPTGPLSANGPLTASGGPLSADGPVLSPTSPVSPVNEICGSGSLLKSVTDRFSGVIPESTLASMQNQHPVGTAKCPAAPT ADDQAPPADQPGN >Mature_173_residues MVAVASGAVSLAAAGVALADDGDAPAPPTPQSPVADLLPGGAKTAVAPSVASDALSAGLPAPVAGLGAPGGPLSAEGPLL SPTGPLSANGPLTASGGPLSADGPVLSPTSPVSPVNEICGSGSLLKSVTDRFSGVIPESTLASMQNQHPVGTAKCPAAPT ADDQAPPADQPGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16160; Mature: 16160
Theoretical pI: Translated: 3.79; Mature: 3.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAVASGAVSLAAAGVALADDGDAPAPPTPQSPVADLLPGGAKTAVAPSVASDALSAGLP CEECCCCHHHHHHCCEEEECCCCCCCCCCCCCCHHHHCCCCCCHHHCCHHHHHHHHCCCC APVAGLGAPGGPLSAEGPLLSPTGPLSANGPLTASGGPLSADGPVLSPTSPVSPVNEICG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC SGSLLKSVTDRFSGVIPESTLASMQNQHPVGTAKCPAAPTADDQAPPADQPGN CCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVAVASGAVSLAAAGVALADDGDAPAPPTPQSPVADLLPGGAKTAVAPSVASDALSAGLP CEECCCCHHHHHHCCEEEECCCCCCCCCCCCCCHHHHCCCCCCHHHCCHHHHHHHHCCCC APVAGLGAPGGPLSAEGPLLSPTGPLSANGPLTASGGPLSADGPVLSPTSPVSPVNEICG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC SGSLLKSVTDRFSGVIPESTLASMQNQHPVGTAKCPAAPTADDQAPPADQPGN CCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA