| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169630344
Identifier: 169630344
GI number: 169630344
Start: 3300346
End: 3301491
Strand: Reverse
Name: 169630344
Synonym: MAB_3263c
Alternate gene names: NA
Gene position: 3301491-3300346 (Counterclockwise)
Preceding gene: 169630345
Following gene: 169630343
Centisome position: 65.15
GC content: 57.5
Gene sequence:
>1146_bases TTGAGCAAGTGGCGGGGTATCGGCAAGCGCGAGGAGTTTGACGTGGTGGTCCGGGGTATCAAGGCATTCAAGAAAATCAT GCAGACAACGTTTGATCCAGAGCTGGTGATTCCCGAAGAGGTCAGGGTTACGGAATTTACCGGCGACAACAGTTTGTCAC GGAAAGACCTTTGTCAGCATCCGATTCCTGCCGATTCCCTGATCTGGAAATATTGGGGGCGCTTTGATGTGATGTATTTC GGCAGCGGGGTGTTGGGCCCCATTGCCGGGGCGTGGCCGCAGATGGGGCGGGGGACCGCGGGGTCTGTCCTGTTCAACGG TGACAGTTCCTTCCGGGCGCGCGCCAAGATATACAAGAAACGGCGCCAGAGATCCCGCGAGTACATTTACGGCTCGGTGT ATGACCCTCCGGAAGACGCCAAGAAATATGGGCTGAAGACCCGGAATATGCATAAGTCCGTCAAAGGCACCCTGCAGGAT GGCACATTTCATGCATTAAACGCGGAAACCTTCTACTTCGCGCATGTCACCTTCTTTTATCACCATTTGATGGTGGTGAC CGAGCGGCTGCATTTCGATGGGGACATGCCGCGGGCGGTGAAGGAGCAGATATTTGAGGAATCCAAGGAGTGGTACAGCA TGTGGGGTGTGGACGATGGTCCCCAGCCGGATACCTACGACGATTTCGAGCGGTATCTGGAAAATGTAGAGCGCAATCAT TTAGTGAGATCGCAGGTAACTCAGCTCATGCTGGAGCAATTCATGGAGCGTCGCCTGGCGCCGCGGTGGTGGCCTACGGC CATGAAGAAATTTGTGTGGCCCTGGCTGGTTGGGCGGCGGCAGGTCGTTGTCAGTAGTTACCCGCCCCACGTGCGCGAGT TGTTCGCATTGGAGTGGACCCCCGAGGACGAGGAGATGCTGCGCCGGTTTATGGATATGTATCGACGGTGCTATGCGGTC CTCGAGCGTCTCCTCCCGGTGAAGTGTTTCTACTTGCCGACCGCGGTGAGAGGTTTTGAGAGGGAAGGGATCGATCCACG CAACATCACCCTCGAATCCGCACGGCAAGCACTTCGGGACAACCGGGCCCGGCGTGCCCCGCGCAAAGACGCGCCGATAG AGGGGGCGGTGGCTGCCGGCCAATGA
Upstream 100 bases:
>100_bases TCACTTGATTTTTGGGCGTCACCGGGAGCATCATCACTTTCTGATGTGAACTGAGTCACAGTCAAACTGGCGGTGCTCAT ATGAGGGGCCAGGCACTGGG
Downstream 100 bases:
>100_bases GGTTCTAGTACCGCCGGTTTCGCCCCGACGGGACTACCTGCCCGGTGCGGCTGGCCAACCCTCCGCGTGCCGATCGGCGC CTCAAATCGCGCGCTCAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MSKWRGIGKREEFDVVVRGIKAFKKIMQTTFDPELVIPEEVRVTEFTGDNSLSRKDLCQHPIPADSLIWKYWGRFDVMYF GSGVLGPIAGAWPQMGRGTAGSVLFNGDSSFRARAKIYKKRRQRSREYIYGSVYDPPEDAKKYGLKTRNMHKSVKGTLQD GTFHALNAETFYFAHVTFFYHHLMVVTERLHFDGDMPRAVKEQIFEESKEWYSMWGVDDGPQPDTYDDFERYLENVERNH LVRSQVTQLMLEQFMERRLAPRWWPTAMKKFVWPWLVGRRQVVVSSYPPHVRELFALEWTPEDEEMLRRFMDMYRRCYAV LERLLPVKCFYLPTAVRGFEREGIDPRNITLESARQALRDNRARRAPRKDAPIEGAVAAGQ
Sequences:
>Translated_381_residues MSKWRGIGKREEFDVVVRGIKAFKKIMQTTFDPELVIPEEVRVTEFTGDNSLSRKDLCQHPIPADSLIWKYWGRFDVMYF GSGVLGPIAGAWPQMGRGTAGSVLFNGDSSFRARAKIYKKRRQRSREYIYGSVYDPPEDAKKYGLKTRNMHKSVKGTLQD GTFHALNAETFYFAHVTFFYHHLMVVTERLHFDGDMPRAVKEQIFEESKEWYSMWGVDDGPQPDTYDDFERYLENVERNH LVRSQVTQLMLEQFMERRLAPRWWPTAMKKFVWPWLVGRRQVVVSSYPPHVRELFALEWTPEDEEMLRRFMDMYRRCYAV LERLLPVKCFYLPTAVRGFEREGIDPRNITLESARQALRDNRARRAPRKDAPIEGAVAAGQ >Mature_380_residues SKWRGIGKREEFDVVVRGIKAFKKIMQTTFDPELVIPEEVRVTEFTGDNSLSRKDLCQHPIPADSLIWKYWGRFDVMYFG SGVLGPIAGAWPQMGRGTAGSVLFNGDSSFRARAKIYKKRRQRSREYIYGSVYDPPEDAKKYGLKTRNMHKSVKGTLQDG TFHALNAETFYFAHVTFFYHHLMVVTERLHFDGDMPRAVKEQIFEESKEWYSMWGVDDGPQPDTYDDFERYLENVERNHL VRSQVTQLMLEQFMERRLAPRWWPTAMKKFVWPWLVGRRQVVVSSYPPHVRELFALEWTPEDEEMLRRFMDMYRRCYAVL ERLLPVKCFYLPTAVRGFEREGIDPRNITLESARQALRDNRARRAPRKDAPIEGAVAAGQ
Specific function: Unknown
COG id: COG3662
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44761; Mature: 44630
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKWRGIGKREEFDVVVRGIKAFKKIMQTTFDPELVIPEEVRVTEFTGDNSLSRKDLCQH CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEECCCCCCCHHHHHCC PIPADSLIWKYWGRFDVMYFGSGVLGPIAGAWPQMGRGTAGSVLFNGDSSFRARAKIYKK CCCHHHHHHHHHCCEEEEEECCCCHHHHHCCCCCCCCCCCCCEEECCCCHHHHHHHHHHH RRQRSREYIYGSVYDPPEDAKKYGLKTRNMHKSVKGTLQDGTFHALNAETFYFAHVTFFY HHHHHHHCEECCCCCCHHHHHHHCCCHHHHHHHHHCHHCCCCEEEECCCEEHHHHHHHHH HHLMVVTERLHFDGDMPRAVKEQIFEESKEWYSMWGVDDGPQPDTYDDFERYLENVERNH HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH LVRSQVTQLMLEQFMERRLAPRWWPTAMKKFVWPWLVGRRQVVVSSYPPHVRELFALEWT HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCC PEDEEMLRRFMDMYRRCYAVLERLLPVKCFYLPTAVRGFEREGIDPRNITLESARQALRD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH NRARRAPRKDAPIEGAVAAGQ HHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure SKWRGIGKREEFDVVVRGIKAFKKIMQTTFDPELVIPEEVRVTEFTGDNSLSRKDLCQH CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEECCCCCCCHHHHHCC PIPADSLIWKYWGRFDVMYFGSGVLGPIAGAWPQMGRGTAGSVLFNGDSSFRARAKIYKK CCCHHHHHHHHHCCEEEEEECCCCHHHHHCCCCCCCCCCCCCEEECCCCHHHHHHHHHHH RRQRSREYIYGSVYDPPEDAKKYGLKTRNMHKSVKGTLQDGTFHALNAETFYFAHVTFFY HHHHHHHCEECCCCCCHHHHHHHCCCHHHHHHHHHCHHCCCCEEEECCCEEHHHHHHHHH HHLMVVTERLHFDGDMPRAVKEQIFEESKEWYSMWGVDDGPQPDTYDDFERYLENVERNH HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH LVRSQVTQLMLEQFMERRLAPRWWPTAMKKFVWPWLVGRRQVVVSSYPPHVRELFALEWT HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCC PEDEEMLRRFMDMYRRCYAVLERLLPVKCFYLPTAVRGFEREGIDPRNITLESARQALRD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH NRARRAPRKDAPIEGAVAAGQ HHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA