| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630317
Identifier: 169630317
GI number: 169630317
Start: 3270157
End: 3271224
Strand: Reverse
Name: 169630317
Synonym: MAB_3236c
Alternate gene names: NA
Gene position: 3271224-3270157 (Counterclockwise)
Preceding gene: 169630318
Following gene: 169630316
Centisome position: 64.56
GC content: 65.73
Gene sequence:
>1068_bases ATGCGCGCGCACCTGCGTGGACGTACTCTCCCGTCCGAGGAGCCAATCGATCTGTGGGTGCACGACGGCGTCATCAGCAT CGAGCCGATTGCGGACGCCGACACCGTCTTTGACGGCGGCTGGTTGTTGCCCGGACTTGTCGATGCCCACTGCCACGTGG GAATCGGTCCGCAGGGGCCGACCTCGCTCGAAGAGGCGGTCGCGCAAGCCGAAGCCGAGCGTGAGGTGGGTGCCCTGCTT CTGCGCGACGCCGGATCACCGGTGGATACCCGTGGTTTCGACGAGCGAGAAGACCTGCCGCGGATCATCCGGGCGGGCAG GCACCTGGCCAAGCCCAAGCGTTACATCCCAGGGCTGCCCCTCGATATCGAGGACGACGCGCAACTTCCGGAAGCTGTTG CGCTCCAGGCGCGTTGGGGTGACGGTTGGGTGAAACTGGTGGGGGACTGGATCGATCGCGCCGTCGGTGATCTAGCGCCG CTATGGTCGGACAAGATCCTCAAACAGGCCATCGATGCCGCGCACGCCAATGGTGCACGTGTCACCGCGCATGTCTTCGG CGAGGACGCGCTGCCTGGCCTCATTCACGCCGGCATCGATTGCATCGAGCACGGCACCGGTCTCACCGACGACACCATCG CCCTGATGGTCGAACATGGCACCGCGCTCGTCCCGACCGTCATCAATATCGAGAACTTCCCCGGTATTGCGGACAAGGCC GGTAAATACCCGAAGTACGCGCAACACATGCGCGATCTGTATGCGGGTCTGCACACGACCTTCGGAAACGCGTACGACGC GGGTATCCCGATCTACGCCGGTACCGATGCCGGCGGCTCGATCGCGCACGGACGCATCTCCGATGAGGTTGCCGCACTCA CCAGGATTGGCATGAGTCCCACCGATGCGCTGGGTGCGGCCTCGTGGCGGGCGCGGAGCTGGCTGGGCCGACCGGGCCTG GAGCATGGGGCACCGGCCGATCTCCTCGGATACCGCGCGGACCCCCGGACCGGTCCGGGGGTGCTGGCGAGTCCAGACCT CGTCATGCTGCGCGGGCAGATTCGATAA
Upstream 100 bases:
>100_bases TCCCCGACCTGTCCGGCATGCCCGAAGGTCTGGGCGAACTGCCCCCGGGTCTGGCCGATATCGACATCTCGAAGCTCAAG TTCCCCAAGAACTGAGCCCG
Downstream 100 bases:
>100_bases AGTGCCCGGCATGCGTTGTGCCGGGGTGGTGCTGGCGAGCTGGATCTTGGCGGTCTCGCTCCCGGCGTCGGCGCACGCCG AGACGCTGTGCCGAGACTTC
Product: amidohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MRAHLRGRTLPSEEPIDLWVHDGVISIEPIADADTVFDGGWLLPGLVDAHCHVGIGPQGPTSLEEAVAQAEAEREVGALL LRDAGSPVDTRGFDEREDLPRIIRAGRHLAKPKRYIPGLPLDIEDDAQLPEAVALQARWGDGWVKLVGDWIDRAVGDLAP LWSDKILKQAIDAAHANGARVTAHVFGEDALPGLIHAGIDCIEHGTGLTDDTIALMVEHGTALVPTVINIENFPGIADKA GKYPKYAQHMRDLYAGLHTTFGNAYDAGIPIYAGTDAGGSIAHGRISDEVAALTRIGMSPTDALGAASWRARSWLGRPGL EHGAPADLLGYRADPRTGPGVLASPDLVMLRGQIR
Sequences:
>Translated_355_residues MRAHLRGRTLPSEEPIDLWVHDGVISIEPIADADTVFDGGWLLPGLVDAHCHVGIGPQGPTSLEEAVAQAEAEREVGALL LRDAGSPVDTRGFDEREDLPRIIRAGRHLAKPKRYIPGLPLDIEDDAQLPEAVALQARWGDGWVKLVGDWIDRAVGDLAP LWSDKILKQAIDAAHANGARVTAHVFGEDALPGLIHAGIDCIEHGTGLTDDTIALMVEHGTALVPTVINIENFPGIADKA GKYPKYAQHMRDLYAGLHTTFGNAYDAGIPIYAGTDAGGSIAHGRISDEVAALTRIGMSPTDALGAASWRARSWLGRPGL EHGAPADLLGYRADPRTGPGVLASPDLVMLRGQIR >Mature_355_residues MRAHLRGRTLPSEEPIDLWVHDGVISIEPIADADTVFDGGWLLPGLVDAHCHVGIGPQGPTSLEEAVAQAEAEREVGALL LRDAGSPVDTRGFDEREDLPRIIRAGRHLAKPKRYIPGLPLDIEDDAQLPEAVALQARWGDGWVKLVGDWIDRAVGDLAP LWSDKILKQAIDAAHANGARVTAHVFGEDALPGLIHAGIDCIEHGTGLTDDTIALMVEHGTALVPTVINIENFPGIADKA GKYPKYAQHMRDLYAGLHTTFGNAYDAGIPIYAGTDAGGSIAHGRISDEVAALTRIGMSPTDALGAASWRARSWLGRPGL EHGAPADLLGYRADPRTGPGVLASPDLVMLRGQIR
Specific function: Unknown
COG id: COG1228
COG function: function code Q; Imidazolonepropionase and related amidohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To S.coelicolor SCO1861 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: NA
Molecular weight: Translated: 37831; Mature: 37831
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAHLRGRTLPSEEPIDLWVHDGVISIEPIADADTVFDGGWLLPGLVDAHCHVGIGPQGP CCCCCCCCCCCCCCCCEEEEECCEEEECCCCCCCCEECCCCCCCCHHCCCEEECCCCCCC TSLEEAVAQAEAEREVGALLLRDAGSPVDTRGFDEREDLPRIIRAGRHLAKPKRYIPGLP HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCC LDIEDDAQLPEAVALQARWGDGWVKLVGDWIDRAVGDLAPLWSDKILKQAIDAAHANGAR CCCCCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE VTAHVFGEDALPGLIHAGIDCIEHGTGLTDDTIALMVEHGTALVPTVINIENFPGIADKA EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEECEEEEECCCCCCHHHC GKYPKYAQHMRDLYAGLHTTFGNAYDAGIPIYAGTDAGGSIAHGRISDEVAALTRIGMSP CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCEECCCHHHHHHHHHHCCCCC TDALGAASWRARSWLGRPGLEHGAPADLLGYRADPRTGPGVLASPDLVMLRGQIR CHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEECCCCC >Mature Secondary Structure MRAHLRGRTLPSEEPIDLWVHDGVISIEPIADADTVFDGGWLLPGLVDAHCHVGIGPQGP CCCCCCCCCCCCCCCCEEEEECCEEEECCCCCCCCEECCCCCCCCHHCCCEEECCCCCCC TSLEEAVAQAEAEREVGALLLRDAGSPVDTRGFDEREDLPRIIRAGRHLAKPKRYIPGLP HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCC LDIEDDAQLPEAVALQARWGDGWVKLVGDWIDRAVGDLAPLWSDKILKQAIDAAHANGAR CCCCCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE VTAHVFGEDALPGLIHAGIDCIEHGTGLTDDTIALMVEHGTALVPTVINIENFPGIADKA EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEECEEEEECCCCCCHHHC GKYPKYAQHMRDLYAGLHTTFGNAYDAGIPIYAGTDAGGSIAHGRISDEVAALTRIGMSP CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCEECCCHHHHHHHHHHCCCCC TDALGAASWRARSWLGRPGLEHGAPADLLGYRADPRTGPGVLASPDLVMLRGQIR CHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]