Click here to switch to the map view.

The map label for this gene is 169630309

Identifier: 169630309

GI number: 169630309

Start: 3263870

End: 3264100

Strand: Reverse

Name: 169630309

Synonym: MAB_3228c

Alternate gene names: NA

Gene position: 3264100-3263870 (Counterclockwise)

Preceding gene: 169630310

Following gene: 169630308

Centisome position: 64.42

GC content: 68.83

Gene sequence:

>231_bases
GTGGTCGATGCCGTCGAGCACTTGGTGCGAGGAATCGTCGACAACCCCGATGATGTCCGCGTTGACCTGGTGACGAACCG
TCGCGGCCGCACCGTGGAGGTTCACGTCCACCCCGACGATCTCGGAAAGGTGATCGGTCGGGGCGGGCGCACCGCCACCG
CCCTGCGCACCCTCGTCGCAGGTGTGGGCGGCCGTGGCATCCGGGTCGACGTGGTGGACACCGACCGGTAG

Upstream 100 bases:

>100_bases
CCAAGAAGGCCGAGGCCGCCGAGGCCGAGGCTCCGGCCGAAGAGCCGGCCGCCGAGTCTGCTGACGCCGCAAGCGAATAG
GACCTCAGATGAGTTCTGTT

Downstream 100 bases:

>100_bases
CTCCATGGAGCTAGTGGTCGGGCGTATCGCCAGGGCGCACGGCGTCACCGGCGAGTTGTCGGTGGAGGTCCGTACCGACG
ATCCCGACGAGCGTTTCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MVDAVEHLVRGIVDNPDDVRVDLVTNRRGRTVEVHVHPDDLGKVIGRGGRTATALRTLVAGVGGRGIRVDVVDTDR

Sequences:

>Translated_76_residues
MVDAVEHLVRGIVDNPDDVRVDLVTNRRGRTVEVHVHPDDLGKVIGRGGRTATALRTLVAGVGGRGIRVDVVDTDR
>Mature_76_residues
MVDAVEHLVRGIVDNPDDVRVDLVTNRRGRTVEVHVHPDDLGKVIGRGGRTATALRTLVAGVGGRGIRVDVVDTDR

Specific function: Unknown

COG id: COG1837

COG function: function code R; Predicted RNA-binding protein (contains KH domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015946
- InterPro:   IPR009019
- InterPro:   IPR004088
- InterPro:   IPR018111
- InterPro:   IPR020627 [H]

Pfam domain/function: PF00013 KH_1 [H]

EC number: NA

Molecular weight: Translated: 8191; Mature: 8191

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDAVEHLVRGIVDNPDDVRVDLVTNRRGRTVEVHVHPDDLGKVIGRGGRTATALRTLVA
CCCHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEECHHHHHHHHCCCCCHHHHHHHHHH
GVGGRGIRVDVVDTDR
CCCCCCEEEEEEECCC
>Mature Secondary Structure
MVDAVEHLVRGIVDNPDDVRVDLVTNRRGRTVEVHVHPDDLGKVIGRGGRTATALRTLVA
CCCHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEECHHHHHHHHCCCCCHHHHHHHHHH
GVGGRGIRVDVVDTDR
CCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]