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The map label for this gene is lppW [H]

Identifier: 169630306

GI number: 169630306

Start: 3261753

End: 3262658

Strand: Direct

Name: lppW [H]

Synonym: MAB_3225

Alternate gene names: 169630306

Gene position: 3261753-3262658 (Clockwise)

Preceding gene: 169630301

Following gene: 169630312

Centisome position: 64.37

GC content: 65.89

Gene sequence:

>906_bases
ATGCGCGGCCAGCATCTGTTTGTGGGCTTGACGCTCACCGCAGCGACCGCGTTGACCTCTGGGTGTGTGGCGTCCGTGCG
TAGCGATCCGGCCACTCCGGTGCTGGCCGTGGTGAGCGCTCCCGCGGAGACGCCTCCGGTCTTCGAGGTGGAGAGCCCCA
CCTCTTTTGAGACGCTCCCCGAGCGCACCACCGCGGCGACCACTCAGGCCAAGAGCGCCGGCGCCACGCTGACCGCCGTG
ATCAAGGATCGCGCGTCGGGTGCGGTCGTATCCAATGGCAACAACAGCACCATCGCCATCGCATCGGTGGCAAAGCTTTT
CATCGCCGACGACCTGCTCATGCGTGAATCGCAGGGCGAGGTCACCCTGACCCCCGCCGATCGTGCGGCCTTCGACCGAA
TGCTGCAGTCCTCTGACGACAGCGCGGCCGAGGTCTTTTGGCAGCGTGGTGGCGGCAATTCGATCATCACCCGCGTGGCC
GCGCGGTATGGGCTTGCCTCCACCAACGTGCCCTCCGACGGGATGTGGTGGAACACCATCAGCACTGCCAATGACCTGGT
CCAGTACTACGACATGCTGCTCTCCGGCACGGGCGGGCTGCCCCCCGAGCGGGCAAACATCATCGTGGACGATCTGAGCC
GCTCGACACCCAATGGCATCGACGGGTACCCACAGCGTTTCGGCATCCCCGACGGCATTCCCGGCGAACCCGTCGCGGTG
AAGCAGGGCTGGATGTGCTGCGTGGGCTCGGCGTGGATGCACCTTTCGACGGGCGTCGTGGGCCCGGACCGGCGATTCAT
CGTGGTGGTGTCGTCACTGCAGACCGCCAACGATGTGACGGCGCGCAACACGCTAACTCAGGCCGTCGCCACCATGTTCC
CCGGTGGGCGAATCGAAACCGAGTAG

Upstream 100 bases:

>100_bases
TATCCAGGAAGTACTAGTAGGCTACCGTGACCGGAACACCCGTCACATGGGTAACCACGGGTAACAAAACCAGATTCTGA
CCGCAGAGGGGGTCCACGTC

Downstream 100 bases:

>100_bases
ATCTGGGCGCCGCTCAATAGTGCGCTGACGCGACTGTTCGGCCCGCCAGGCCGCGATCTTGGCGTGATCTCCCGAGAGCA
GCACCGGTGGCACATCCATC

Product: putative lipoprotein LppW precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MRGQHLFVGLTLTAATALTSGCVASVRSDPATPVLAVVSAPAETPPVFEVESPTSFETLPERTTAATTQAKSAGATLTAV
IKDRASGAVVSNGNNSTIAIASVAKLFIADDLLMRESQGEVTLTPADRAAFDRMLQSSDDSAAEVFWQRGGGNSIITRVA
ARYGLASTNVPSDGMWWNTISTANDLVQYYDMLLSGTGGLPPERANIIVDDLSRSTPNGIDGYPQRFGIPDGIPGEPVAV
KQGWMCCVGSAWMHLSTGVVGPDRRFIVVVSSLQTANDVTARNTLTQAVATMFPGGRIETE

Sequences:

>Translated_301_residues
MRGQHLFVGLTLTAATALTSGCVASVRSDPATPVLAVVSAPAETPPVFEVESPTSFETLPERTTAATTQAKSAGATLTAV
IKDRASGAVVSNGNNSTIAIASVAKLFIADDLLMRESQGEVTLTPADRAAFDRMLQSSDDSAAEVFWQRGGGNSIITRVA
ARYGLASTNVPSDGMWWNTISTANDLVQYYDMLLSGTGGLPPERANIIVDDLSRSTPNGIDGYPQRFGIPDGIPGEPVAV
KQGWMCCVGSAWMHLSTGVVGPDRRFIVVVSSLQTANDVTARNTLTQAVATMFPGGRIETE
>Mature_301_residues
MRGQHLFVGLTLTAATALTSGCVASVRSDPATPVLAVVSAPAETPPVFEVESPTSFETLPERTTAATTQAKSAGATLTAV
IKDRASGAVVSNGNNSTIAIASVAKLFIADDLLMRESQGEVTLTPADRAAFDRMLQSSDDSAAEVFWQRGGGNSIITRVA
ARYGLASTNVPSDGMWWNTISTANDLVQYYDMLLSGTGGLPPERANIIVDDLSRSTPNGIDGYPQRFGIPDGIPGEPVAV
KQGWMCCVGSAWMHLSTGVVGPDRRFIVVVSSLQTANDVTARNTLTQAVATMFPGGRIETE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31594; Mature: 31594

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGQHLFVGLTLTAATALTSGCVASVRSDPATPVLAVVSAPAETPPVFEVESPTSFETLP
CCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCCCHHHCC
ERTTAATTQAKSAGATLTAVIKDRASGAVVSNGNNSTIAIASVAKLFIADDLLMRESQGE
CHHHHHHHHHHHCCCEEEEEEHHCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHCCCCC
VTLTPADRAAFDRMLQSSDDSAAEVFWQRGGGNSIITRVAARYGLASTNVPSDGMWWNTI
EEECCCHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEECCH
STANDLVQYYDMLLSGTGGLPPERANIIVDDLSRSTPNGIDGYPQRFGIPDGIPGEPVAV
HHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCEEE
KQGWMCCVGSAWMHLSTGVVGPDRRFIVVVSSLQTANDVTARNTLTQAVATMFPGGRIET
CCCCEEEECHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEECC
E
C
>Mature Secondary Structure
MRGQHLFVGLTLTAATALTSGCVASVRSDPATPVLAVVSAPAETPPVFEVESPTSFETLP
CCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCCCHHHCC
ERTTAATTQAKSAGATLTAVIKDRASGAVVSNGNNSTIAIASVAKLFIADDLLMRESQGE
CHHHHHHHHHHHCCCEEEEEEHHCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHCCCCC
VTLTPADRAAFDRMLQSSDDSAAEVFWQRGGGNSIITRVAARYGLASTNVPSDGMWWNTI
EEECCCHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEECCH
STANDLVQYYDMLLSGTGGLPPERANIIVDDLSRSTPNGIDGYPQRFGIPDGIPGEPVAV
HHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCEEE
KQGWMCCVGSAWMHLSTGVVGPDRRFIVVVSSLQTANDVTARNTLTQAVATMFPGGRIET
CCCCEEEECHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEECC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]