| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630312
Identifier: 169630312
GI number: 169630312
Start: 3265295
End: 3265702
Strand: Direct
Name: 169630312
Synonym: MAB_3231
Alternate gene names: NA
Gene position: 3265295-3265702 (Clockwise)
Preceding gene: 169630306
Following gene: 169630314
Centisome position: 64.44
GC content: 63.97
Gene sequence:
>408_bases ATGCCCACTCGGACCGAAATCATCACGCAATTCGTCCCGAACTCTCCGTTATGTCAGCATCTGGGAATCACGCTGACCGA GATCGGTGACGATCGCGCGGTGTTGCACATGCCTTTCAAATCCGAGCTGGCGACGATGGGCCAGACCGTGCATGGCGGCG CCATCGCGACCCTCGCCGATACCGCCGCCATGGCAGCGGCATGGGCCGACGACGTGGTGCCCGAGAAGTTCGGTGGCGCA ACGGCTTCGCTTGCCGTCAACTACGTTTGCGCGGCCAACGCCGCCGACCTTACCGCGGTGGGCCAGGTGGTCCGCCGCGG TAAGCGGCTATCGAACATCGAGGTCACGGTGTGCGATTCCGCGGGCCAAGTGGTCGCAAAGGCGCTGGCCACCTACAACT TCGCCTAG
Upstream 100 bases:
>100_bases CGGGTGTCGATGGCGGTGGCGTAGTCGACCAAGAGCTGTTGAATCTGCAGGCGGTCGGAAACCTCGTCGAGAGTCCAAGC GGATGTCATAGCTTGTGAGC
Downstream 100 bases:
>100_bases GCGGCACCAACAGCGTCCCCGGCCAACAGCTCCCGGACGCGCGGGATGACCTCGGTGCCATAGAGCTCCACGTTCTGCAT GCCCAACCCCGGCTGTGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MPTRTEIITQFVPNSPLCQHLGITLTEIGDDRAVLHMPFKSELATMGQTVHGGAIATLADTAAMAAAWADDVVPEKFGGA TASLAVNYVCAANAADLTAVGQVVRRGKRLSNIEVTVCDSAGQVVAKALATYNFA
Sequences:
>Translated_135_residues MPTRTEIITQFVPNSPLCQHLGITLTEIGDDRAVLHMPFKSELATMGQTVHGGAIATLADTAAMAAAWADDVVPEKFGGA TASLAVNYVCAANAADLTAVGQVVRRGKRLSNIEVTVCDSAGQVVAKALATYNFA >Mature_134_residues PTRTEIITQFVPNSPLCQHLGITLTEIGDDRAVLHMPFKSELATMGQTVHGGAIATLADTAAMAAAWADDVVPEKFGGAT ASLAVNYVCAANAADLTAVGQVVRRGKRLSNIEVTVCDSAGQVVAKALATYNFA
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14031; Mature: 13900
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTRTEIITQFVPNSPLCQHLGITLTEIGDDRAVLHMPFKSELATMGQTVHGGAIATLAD CCCHHHHHHHHCCCCCCHHHHCCEEEECCCCCEEEECCCHHHHHHHCCCCCCCCHHHHHH TAAMAAAWADDVVPEKFGGATASLAVNYVCAANAADLTAVGQVVRRGKRLSNIEVTVCDS HHHHHHHHHHHCCCHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEECC AGQVVAKALATYNFA CHHHHHHHHHHHCCC >Mature Secondary Structure PTRTEIITQFVPNSPLCQHLGITLTEIGDDRAVLHMPFKSELATMGQTVHGGAIATLAD CCHHHHHHHHCCCCCCHHHHCCEEEECCCCCEEEECCCHHHHHHHCCCCCCCCHHHHHH TAAMAAAWADDVVPEKFGGATASLAVNYVCAANAADLTAVGQVVRRGKRLSNIEVTVCDS HHHHHHHHHHHCCCHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEECC AGQVVAKALATYNFA CHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA