The gene/protein map for NC_010397 is currently unavailable.
Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

Click here to switch to the map view.

The map label for this gene is cdsA [H]

Identifier: 169630268

GI number: 169630268

Start: 3230789

End: 3231667

Strand: Reverse

Name: cdsA [H]

Synonym: MAB_3186c

Alternate gene names: 169630268

Gene position: 3231667-3230789 (Counterclockwise)

Preceding gene: 169630269

Following gene: 169630265

Centisome position: 63.78

GC content: 64.39

Gene sequence:

>879_bases
ATGGGAGACACCGACGCGGCTCCGGCCCCCGGCAGCAGCCCTGCGCCCCCTGCGGGGGCGAAGTCCCGGGCCGGGCGCAA
CCTGCCGGCCGCAATTGGCGTCGGGGTTGCGCTCGCCGCCCTGATCATTTTCTCGTTGTTGTACCAGAAGGAGATCTGGG
TCGGCATCATCTCGGTCTTCCTCGGGATCGCGATGTGGGAGGTGACCAAGCGGCTGCGCCAGGCCGATATCTCGGTTCCT
TTCATCCCCTTGTTCTTCGGCGGGCAGGCCATGATCTGGTTGACGTGGCCGTGGGGGACCGCGGGATCGGTTGGTGCCTT
CGCCGCGACCGTTGTGGTGTGCATGATTTGGCGGCTCTTGAGCCAGGGGCTGGGCAGTCAGCCGGTGAATTATCTGCGCG
ATGTGGCGATCACGGTTTTCGTGGCCGCATGGATTCCGCTGTTCGCATCCTTCGGCGCGCTGCTGGTCTATCCGGACAAC
GGCGCAGAGCAGGTTTTCTGCCTGATGCTCGGTGTCACCTTCTCCGATATCGGCGGATACGCGGCGGGGGTCTTGTTCGG
TAAGCATCCGATGGCACCCGCGATCAGCCCGAAGAAATCCTGGGAGGGCCTGGCGGGCTCGCTCGTGGTGGGAACCACGG
CGTCTACTCTGGCGGTGACGTTCCTGCTCGGACATCACCCGTTCGTGGGTATCGCGCTCGGCGTGATGCTTGTCATCACC
GGCACACTGGGCGACCTCGTGGAGTCACAGGTCAAGCGCGACTTGGGGATCAAGGATATGGGCACGCTGCTGCCCGGTCA
CGGCGGCATCATGGACCGCCTGGACTCGCTGCTGCCGTCGGCGGTCGCTACCTGGATTGTGCTGACGCTCTTCATCTAA

Upstream 100 bases:

>100_bases
TGGACAAGACCACCGCGCAGTACGTGAGCCAGATCGATGAGCTGGTGAAACACAAAGAAGGCGAGCTACTGGAGGTCTAG
GGCCGCCGGTAGTGACGACC

Downstream 100 bases:

>100_bases
AGAGCGCGTAACTAGGCGTGGTTTGACGCCTCCGCGCTTCGGTACAGCACTGTTTGATAAATCCCGCTGACGGTTGCGCC
ATAGAGGATCGCGGCCGCGA

Product: phosphatidate cytidylyltransferase (CdsA)

Products: NA

Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MGDTDAAPAPGSSPAPPAGAKSRAGRNLPAAIGVGVALAALIIFSLLYQKEIWVGIISVFLGIAMWEVTKRLRQADISVP
FIPLFFGGQAMIWLTWPWGTAGSVGAFAATVVVCMIWRLLSQGLGSQPVNYLRDVAITVFVAAWIPLFASFGALLVYPDN
GAEQVFCLMLGVTFSDIGGYAAGVLFGKHPMAPAISPKKSWEGLAGSLVVGTTASTLAVTFLLGHHPFVGIALGVMLVIT
GTLGDLVESQVKRDLGIKDMGTLLPGHGGIMDRLDSLLPSAVATWIVLTLFI

Sequences:

>Translated_292_residues
MGDTDAAPAPGSSPAPPAGAKSRAGRNLPAAIGVGVALAALIIFSLLYQKEIWVGIISVFLGIAMWEVTKRLRQADISVP
FIPLFFGGQAMIWLTWPWGTAGSVGAFAATVVVCMIWRLLSQGLGSQPVNYLRDVAITVFVAAWIPLFASFGALLVYPDN
GAEQVFCLMLGVTFSDIGGYAAGVLFGKHPMAPAISPKKSWEGLAGSLVVGTTASTLAVTFLLGHHPFVGIALGVMLVIT
GTLGDLVESQVKRDLGIKDMGTLLPGHGGIMDRLDSLLPSAVATWIVLTLFI
>Mature_291_residues
GDTDAAPAPGSSPAPPAGAKSRAGRNLPAAIGVGVALAALIIFSLLYQKEIWVGIISVFLGIAMWEVTKRLRQADISVPF
IPLFFGGQAMIWLTWPWGTAGSVGAFAATVVVCMIWRLLSQGLGSQPVNYLRDVAITVFVAAWIPLFASFGALLVYPDNG
AEQVFCLMLGVTFSDIGGYAAGVLFGKHPMAPAISPKKSWEGLAGSLVVGTTASTLAVTFLLGHHPFVGIALGVMLVITG
TLGDLVESQVKRDLGIKDMGTLLPGHGGIMDRLDSLLPSAVATWIVLTLFI

Specific function: Phospholipid biosynthesis. [C]

COG id: COG0575

COG function: function code I; CDP-diglyceride synthetase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDS family [H]

Homologues:

Organism=Escherichia coli, GI87081696, Length=125, Percent_Identity=41.6, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1787677, Length=107, Percent_Identity=40.1869158878505, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000374 [H]

Pfam domain/function: PF01148 CTP_transf_1 [H]

EC number: =2.7.7.41 [H]

Molecular weight: Translated: 30559; Mature: 30428

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: PS01315 CDS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDTDAAPAPGSSPAPPAGAKSRAGRNLPAAIGVGVALAALIIFSLLYQKEIWVGIISVF
CCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGIAMWEVTKRLRQADISVPFIPLFFGGQAMIWLTWPWGTAGSVGAFAATVVVCMIWRLL
HHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
SQGLGSQPVNYLRDVAITVFVAAWIPLFASFGALLVYPDNGAEQVFCLMLGVTFSDIGGY
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHH
AAGVLFGKHPMAPAISPKKSWEGLAGSLVVGTTASTLAVTFLLGHHPFVGIALGVMLVIT
HHHHHHCCCCCCCCCCCCHHHCCCCCCEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
GTLGDLVESQVKRDLGIKDMGTLLPGHGGIMDRLDSLLPSAVATWIVLTLFI
HHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GDTDAAPAPGSSPAPPAGAKSRAGRNLPAAIGVGVALAALIIFSLLYQKEIWVGIISVF
CCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGIAMWEVTKRLRQADISVPFIPLFFGGQAMIWLTWPWGTAGSVGAFAATVVVCMIWRLL
HHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
SQGLGSQPVNYLRDVAITVFVAAWIPLFASFGALLVYPDNGAEQVFCLMLGVTFSDIGGY
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHH
AAGVLFGKHPMAPAISPKKSWEGLAGSLVVGTTASTLAVTFLLGHHPFVGIALGVMLVIT
HHHHHHCCCCCCCCCCCCHHHCCCCCCEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
GTLGDLVESQVKRDLGIKDMGTLLPGHGGIMDRLDSLLPSAVATWIVLTLFI
HHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]