| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630227
Identifier: 169630227
GI number: 169630227
Start: 3185373
End: 3186149
Strand: Direct
Name: 169630227
Synonym: MAB_3145
Alternate gene names: NA
Gene position: 3185373-3186149 (Clockwise)
Preceding gene: 169630226
Following gene: 169630231
Centisome position: 62.86
GC content: 67.7
Gene sequence:
>777_bases ATGAGTCAGCGACGCCCGTTGATGCTGATGCGGCCGGTTCCCGGACCATCACCGATCCACGCGCTGTGGGCCGGCACCAA ACTCCTCGCCGTGCTGGCGATATCGGTGCTGCTGACCATCACGCCGTCCTGGCCCGCGATCGGGCTCGTCGCACTGCTCA TCCTGGTAACCGCCGGTCTGGCCGGGATCTCCCCCAGGTGCATCCCGTCCGTTCCGCGGTGGGTCTGGTTGCTCGTGGTG GCGGGCAGTTTGTTCACCATCGTCAACGGAGGCGCCCCCGAGCTGAAGCTCGGCCCTGCCACCATCGGCGTGGGCGGCTT CCTGGACTTTCTCCGCGTTACGTCGCTGGGGCTTGTCTTGATCGGCCTTGGCGCGGTGATCTCGTGGACCACCCAGGTCG CCGATATCGCTCCAGCGGTTGCACTTTTATGTCGGCCACTGCGCGTACTGCGGGTGCCCGTCGACGACTGGGCAGTCACC ATTTCCTTGGCGTTCCGCATGTTTCCGATGCTCTCCGAGGAGTTCCGGCTGTTGGCGGCCGCCCGCAGACTCCAGCCACC TGCGCCGGAGAAGCCGTCCCGGCGTGCGGAAGTCGTCGATCTGTGCACAGCCGCGATGGTGGTATCGCTGCGGCGCGCAA CCGAGATGGGTGACGCCATCACCGCGCGGGGTGGCGCCGGGCGCATCTCCGCGCACACCGTCTATCCGGGCTGGCGCGAT GCCATCGCTGCGGCGGTGCTCGTCGGCGTGGTGACGCTCGCGGTGGTGCTGGGCTGA
Upstream 100 bases:
>100_bases GCGGGCAGGCCGTGATCGTGATCTCCCACGATACCGACAGTCTGTCTCCACTGTGTCCGCGCACAATCCGTCTGGAGCAG GGTGAGTTGGTGACCGCCGG
Downstream 100 bases:
>100_bases CGCGGTGGCTAAATCTCTTCTGCCCCAATACCGACATCGGCAACCTCACCCTCGCCTGCGCCCCCACCACCGCCTCCTCA ACCAGGGCTGGACCACCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MSQRRPLMLMRPVPGPSPIHALWAGTKLLAVLAISVLLTITPSWPAIGLVALLILVTAGLAGISPRCIPSVPRWVWLLVV AGSLFTIVNGGAPELKLGPATIGVGGFLDFLRVTSLGLVLIGLGAVISWTTQVADIAPAVALLCRPLRVLRVPVDDWAVT ISLAFRMFPMLSEEFRLLAAARRLQPPAPEKPSRRAEVVDLCTAAMVVSLRRATEMGDAITARGGAGRISAHTVYPGWRD AIAAAVLVGVVTLAVVLG
Sequences:
>Translated_258_residues MSQRRPLMLMRPVPGPSPIHALWAGTKLLAVLAISVLLTITPSWPAIGLVALLILVTAGLAGISPRCIPSVPRWVWLLVV AGSLFTIVNGGAPELKLGPATIGVGGFLDFLRVTSLGLVLIGLGAVISWTTQVADIAPAVALLCRPLRVLRVPVDDWAVT ISLAFRMFPMLSEEFRLLAAARRLQPPAPEKPSRRAEVVDLCTAAMVVSLRRATEMGDAITARGGAGRISAHTVYPGWRD AIAAAVLVGVVTLAVVLG >Mature_257_residues SQRRPLMLMRPVPGPSPIHALWAGTKLLAVLAISVLLTITPSWPAIGLVALLILVTAGLAGISPRCIPSVPRWVWLLVVA GSLFTIVNGGAPELKLGPATIGVGGFLDFLRVTSLGLVLIGLGAVISWTTQVADIAPAVALLCRPLRVLRVPVDDWAVTI SLAFRMFPMLSEEFRLLAAARRLQPPAPEKPSRRAEVVDLCTAAMVVSLRRATEMGDAITARGGAGRISAHTVYPGWRDA IAAAVLVGVVTLAVVLG
Specific function: Unknown
COG id: COG0619
COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CbiQ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003339 [H]
Pfam domain/function: PF02361 CbiQ [H]
EC number: NA
Molecular weight: Translated: 27159; Mature: 27028
Theoretical pI: Translated: 11.64; Mature: 11.64
Prosite motif: PS00104 EPSP_SYNTHASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQRRPLMLMRPVPGPSPIHALWAGTKLLAVLAISVLLTITPSWPAIGLVALLILVTAGL CCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH AGISPRCIPSVPRWVWLLVVAGSLFTIVNGGAPELKLGPATIGVGGFLDFLRVTSLGLVL CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHH IGLGAVISWTTQVADIAPAVALLCRPLRVLRVPVDDWAVTISLAFRMFPMLSEEFRLLAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH ARRLQPPAPEKPSRRAEVVDLCTAAMVVSLRRATEMGDAITARGGAGRISAHTVYPGWRD HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEECCCHHH AIAAAVLVGVVTLAVVLG HHHHHHHHHHHHHHHHCC >Mature Secondary Structure SQRRPLMLMRPVPGPSPIHALWAGTKLLAVLAISVLLTITPSWPAIGLVALLILVTAGL CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH AGISPRCIPSVPRWVWLLVVAGSLFTIVNGGAPELKLGPATIGVGGFLDFLRVTSLGLVL CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHH IGLGAVISWTTQVADIAPAVALLCRPLRVLRVPVDDWAVTISLAFRMFPMLSEEFRLLAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH ARRLQPPAPEKPSRRAEVVDLCTAAMVVSLRRATEMGDAITARGGAGRISAHTVYPGWRD HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEECCCHHH AIAAAVLVGVVTLAVVLG HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]