Click here to switch to the map view.

The map label for this gene is mmpS4 [H]

Identifier: 169630231

GI number: 169630231

Start: 3195524

End: 3195955

Strand: Direct

Name: mmpS4 [H]

Synonym: MAB_3149

Alternate gene names: 169630231

Gene position: 3195524-3195955 (Clockwise)

Preceding gene: 169630227

Following gene: 169630232

Centisome position: 63.06

GC content: 56.94

Gene sequence:

>432_bases
ATGTTCCGCACTATCCGAAAAATCTGGATGCCGCTCCTGATCGCAGCGGTGGTGGCGATCGGGGGTTTCGCGGTCTTTCG
TGTTCGGGGGATCTTCGGATCAGAGTCTTTTGGCGCCTCGGCGGACAACAACGCCAAAGATGCCGTCCCGTACAACCCAA
AAACCCTTGTATACGAGATATTTGGCGAACCCGGCGCGATGGCGGATGTGAACTACTTCAACGAGGACGCGCAGCCCACC
CGCGTGGACAACGTGCAACTGCCCTGGGCCTTCAAGATCGTCTCCACGCTGCCGTCATTGAGCGGGAACATTGTGGCACA
AGGAAATGGCGATCAGATCGGATGCCGAATAACGGTCAACGGTGAGGTCAAGATGGAACGGGTGTCCACTGAGCACAACG
CCTACATCTACTGCCTGGTGAAGTCCGCATGA

Upstream 100 bases:

>100_bases
AGTTCCGTTGGGCAAAGAAGCCCCACTCGACCAGCCGCGGCAGTTCTCATGTGTGGACCGTGAGCGTGTGCCAATACCAT
TGAGCGCAAAGGGGTTTGAG

Downstream 100 bases:

>100_bases
GGCACGGTAGCGGTGACCACACCGCGCGCCCGCCACGTATCGCGCGGCTTATCCGCACATTGTCCATTCCGATCATTCTC
TTCTGGCTGGGCATCGCGAT

Product: MmpS family protein

Products: NA

Alternate protein names: PGB14T-X [H]

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MFRTIRKIWMPLLIAAVVAIGGFAVFRVRGIFGSESFGASADNNAKDAVPYNPKTLVYEIFGEPGAMADVNYFNEDAQPT
RVDNVQLPWAFKIVSTLPSLSGNIVAQGNGDQIGCRITVNGEVKMERVSTEHNAYIYCLVKSA

Sequences:

>Translated_143_residues
MFRTIRKIWMPLLIAAVVAIGGFAVFRVRGIFGSESFGASADNNAKDAVPYNPKTLVYEIFGEPGAMADVNYFNEDAQPT
RVDNVQLPWAFKIVSTLPSLSGNIVAQGNGDQIGCRITVNGEVKMERVSTEHNAYIYCLVKSA
>Mature_143_residues
MFRTIRKIWMPLLIAAVVAIGGFAVFRVRGIFGSESFGASADNNAKDAVPYNPKTLVYEIFGEPGAMADVNYFNEDAQPT
RVDNVQLPWAFKIVSTLPSLSGNIVAQGNGDQIGCRITVNGEVKMERVSTEHNAYIYCLVKSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008693 [H]

Pfam domain/function: PF05423 Mycobact_memb [H]

EC number: NA

Molecular weight: Translated: 15620; Mature: 15620

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRTIRKIWMPLLIAAVVAIGGFAVFRVRGIFGSESFGASADNNAKDAVPYNPKTLVYEI
CCHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
FGEPGAMADVNYFNEDAQPTRVDNVQLPWAFKIVSTLPSLSGNIVAQGNGDQIGCRITVN
ECCCCCEEECCCCCCCCCCCCCCCEECCHHHHHHHHCCCCCCCEEEECCCCEEEEEEEEC
GEVKMERVSTEHNAYIYCLVKSA
CCEEEEEECCCCCEEEEEEEECC
>Mature Secondary Structure
MFRTIRKIWMPLLIAAVVAIGGFAVFRVRGIFGSESFGASADNNAKDAVPYNPKTLVYEI
CCHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
FGEPGAMADVNYFNEDAQPTRVDNVQLPWAFKIVSTLPSLSGNIVAQGNGDQIGCRITVN
ECCCCCEEECCCCCCCCCCCCCCCEECCHHHHHHHHCCCCCCCEEEECCCCEEEEEEEEC
GEVKMERVSTEHNAYIYCLVKSA
CCEEEEEECCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]