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The map label for this gene is azlB [H]

Identifier: 169630181

GI number: 169630181

Start: 3142455

End: 3142970

Strand: Reverse

Name: azlB [H]

Synonym: MAB_3099c

Alternate gene names: 169630181

Gene position: 3142970-3142455 (Counterclockwise)

Preceding gene: 169630183

Following gene: 169630178

Centisome position: 62.03

GC content: 62.02

Gene sequence:

>516_bases
ATGGTCGCAAAATCACCGGAATCGCGGTTCGACATGCCTCCCGCGCCGAATGATGTTCGGCGCGTGGAGCTCGATGACGT
GGACCGCCGCATCCTGCTGGAACTGCACAACGACGCACGTATACCCAACAGTGTGTTGGCTGAGGCCGTGGGGATCGCGG
CCTCCACATGTCATGGACGGGTCCGGCGCCTGCAAGAGACCGGTGTGATCCGTGGATTCTTCACCGACGTGGACCCCGCC
GCCATTGGTAGGCCGCTACAGGCGATGATCTCGGTCAGCCTGCAGGCCAATGCGCGTGGCAAGATCCGCACCTTCATCCG
TGACATACGTGAGTTGCCACAAGTGATCGACGTGTACTTCCTTGCGGGCGCGGATGATTACATCCTGCACGTCGCGGCCC
GCGACACCGAGGACCTGCGGTCCTTCGTCGTTGAGAAACTCAACGCGCTGCCCGATGTCGCGGGCACACAGACGTCGTTG
ATCTTCGAGCATCTACGTGGGGGAGCGCCCCTGTAG

Upstream 100 bases:

>100_bases
ATTCTTCTTCTCCTGTTTCAAAACTAAGTCCCGCGTTCAAGTGTGAAGAAGCGTCGATAAACGCGCAATATTTCCGTGGA
AGATTCGGTAGATTGCAAAA

Downstream 100 bases:

>100_bases
AGCGCCGATCAGCTGATGGCGGGTGCGGGGTCCTCCAGAACTCCGTCGGAGTTGCCGTCCTGCCCGACGATCCCGTTCTC
GTCCACCTCGTACACATGTG

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MVAKSPESRFDMPPAPNDVRRVELDDVDRRILLELHNDARIPNSVLAEAVGIAASTCHGRVRRLQETGVIRGFFTDVDPA
AIGRPLQAMISVSLQANARGKIRTFIRDIRELPQVIDVYFLAGADDYILHVAARDTEDLRSFVVEKLNALPDVAGTQTSL
IFEHLRGGAPL

Sequences:

>Translated_171_residues
MVAKSPESRFDMPPAPNDVRRVELDDVDRRILLELHNDARIPNSVLAEAVGIAASTCHGRVRRLQETGVIRGFFTDVDPA
AIGRPLQAMISVSLQANARGKIRTFIRDIRELPQVIDVYFLAGADDYILHVAARDTEDLRSFVVEKLNALPDVAGTQTSL
IFEHLRGGAPL
>Mature_171_residues
MVAKSPESRFDMPPAPNDVRRVELDDVDRRILLELHNDARIPNSVLAEAVGIAASTCHGRVRRLQETGVIRGFFTDVDPA
AIGRPLQAMISVSLQANARGKIRTFIRDIRELPQVIDVYFLAGADDYILHVAARDTEDLRSFVVEKLNALPDVAGTQTSL
IFEHLRGGAPL

Specific function: Transcriptional repressor of the azlBCD operon involved in branched-chain amino acid transport [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081742, Length=148, Percent_Identity=27.7027027027027, Blast_Score=82, Evalue=1e-17,
Organism=Escherichia coli, GI1787116, Length=144, Percent_Identity=30.5555555555556, Blast_Score=80, Evalue=6e-17,
Organism=Escherichia coli, GI1790182, Length=141, Percent_Identity=24.113475177305, Blast_Score=64, Evalue=5e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 18880; Mature: 18880

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAKSPESRFDMPPAPNDVRRVELDDVDRRILLELHNDARIPNSVLAEAVGIAASTCHGR
CCCCCCCCCCCCCCCCCCCEECCHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
VRRLQETGVIRGFFTDVDPAAIGRPLQAMISVSLQANARGKIRTFIRDIRELPQVIDVYF
HHHHHHHCCCEECCCCCCHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LAGADDYILHVAARDTEDLRSFVVEKLNALPDVAGTQTSLIFEHLRGGAPL
HCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVAKSPESRFDMPPAPNDVRRVELDDVDRRILLELHNDARIPNSVLAEAVGIAASTCHGR
CCCCCCCCCCCCCCCCCCCEECCHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
VRRLQETGVIRGFFTDVDPAAIGRPLQAMISVSLQANARGKIRTFIRDIRELPQVIDVYF
HHHHHHHCCCEECCCCCCHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LAGADDYILHVAARDTEDLRSFVVEKLNALPDVAGTQTSLIFEHLRGGAPL
HCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9287000; 9308178; 9384377 [H]