| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630177
Identifier: 169630177
GI number: 169630177
Start: 3138107
End: 3138568
Strand: Reverse
Name: 169630177
Synonym: MAB_3095c
Alternate gene names: NA
Gene position: 3138568-3138107 (Counterclockwise)
Preceding gene: 169630178
Following gene: 169630176
Centisome position: 61.94
GC content: 67.53
Gene sequence:
>462_bases GTGTCCGCCGCGGCCAGGGTCAAGATCCTCATCGCCTTCATGTGTGTGGCGATGGTGGTGTACTTCCTGATCCTGGGAAA GATGGGTATCGCCCTCGTGCAGACCGGGAAGGCCGCTGCGATCGGCATGGGGGTCGGGGTTCTGATCCTGCCGTTCATCG GTTTGTGGGCCATGATCGCCACGCTGCGTGCGGGTTTCGCGCATCAGCGCCTCGCCGCGCTGGCCGCCCAGCAGGGCCGT GAACTGGATGTGAGTGCGCTACGCACCACGCCGTCCGGGCGGGTCAACCGCGAGGATGCCGATGCGCTCTTCGCGACCGT GAAGGCCGAGGTCGAAGCGGAACCCGACGACTGGGTGGGGTGGTACCGCTTGGCTCGCGCCTACGACTACGCGGGAGACC GGGGCCGCGCCCGGGACACCATGCGCACCGCGGTACAGATGCAGCAGGACGCCGCGAGATGA
Upstream 100 bases:
>100_bases TCGATCGGAGCTCCTTTGCGCCGGGGGTGCTGCTGGCCGTGCGTGATATCGCGAAGCGACCCGGCCTCACGATCGGCATC GAGCCCCTGCTGGAGCTGTA
Downstream 100 bases:
>100_bases GTCGCCTGCTGGTGGTGCATCACACTCCGTCGCCGGCCACCCGCGAACTATTGGAAGCCGTACTGGAGGGCGCCAACGAC CCGGAGATTTCCGGGGTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: ORF Z [H]
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MSAAARVKILIAFMCVAMVVYFLILGKMGIALVQTGKAAAIGMGVGVLILPFIGLWAMIATLRAGFAHQRLAALAAQQGR ELDVSALRTTPSGRVNREDADALFATVKAEVEAEPDDWVGWYRLARAYDYAGDRGRARDTMRTAVQMQQDAAR
Sequences:
>Translated_153_residues MSAAARVKILIAFMCVAMVVYFLILGKMGIALVQTGKAAAIGMGVGVLILPFIGLWAMIATLRAGFAHQRLAALAAQQGR ELDVSALRTTPSGRVNREDADALFATVKAEVEAEPDDWVGWYRLARAYDYAGDRGRARDTMRTAVQMQQDAAR >Mature_152_residues SAAARVKILIAFMCVAMVVYFLILGKMGIALVQTGKAAAIGMGVGVLILPFIGLWAMIATLRAGFAHQRLAALAAQQGRE LDVSALRTTPSGRVNREDADALFATVKAEVEAEPDDWVGWYRLARAYDYAGDRGRARDTMRTAVQMQQDAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 TPR repeat [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR013105 - InterPro: IPR019734 [H]
Pfam domain/function: PF07719 TPR_2 [H]
EC number: NA
Molecular weight: Translated: 16560; Mature: 16428
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAARVKILIAFMCVAMVVYFLILGKMGIALVQTGKAAAIGMGVGVLILPFIGLWAMIA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH TLRAGFAHQRLAALAAQQGRELDVSALRTTPSGRVNREDADALFATVKAEVEAEPDDWVG HHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHH WYRLARAYDYAGDRGRARDTMRTAVQMQQDAAR HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SAAARVKILIAFMCVAMVVYFLILGKMGIALVQTGKAAAIGMGVGVLILPFIGLWAMIA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH TLRAGFAHQRLAALAAQQGRELDVSALRTTPSGRVNREDADALFATVKAEVEAEPDDWVG HHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHH WYRLARAYDYAGDRGRARDTMRTAVQMQQDAAR HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8021227 [H]