| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630162
Identifier: 169630162
GI number: 169630162
Start: 3125718
End: 3126299
Strand: Reverse
Name: 169630162
Synonym: MAB_3079c
Alternate gene names: NA
Gene position: 3126299-3125718 (Counterclockwise)
Preceding gene: 169630166
Following gene: 169630160
Centisome position: 61.7
GC content: 62.89
Gene sequence:
>582_bases ATGACCGATCAGGGGCCGCCCGGCGGATTGCCGATCCGGACGGAGGTATTTTTCACTGAGGATGGCCGGGCCAGGCTTGC CAAGGGTGCGCTCCAGACGATCGGGCGGTCGCGGGGCGTCTGGATTCTGCTGGCGCTGGCGCTCTTGTACGTCGCGTTCT TCTTCTTTTTTGTCGGAATCTCCGCCGGTGTTGTCATCCTGGTCGTGGTGGCGGCGGCAGCAGCACTGATCACGTCGAGA ATTCGCGCTCGCACTCGGCAATCGATGCGGCCGATACCGGCCGGGACCGTGCAGCGCGCCGAGTTCGGCGCGTCAGACTT CACCTTCTGGGCGCTGCGCCCGACACCGAATGCTCTACTCGGACAGTCATTTCTGACGACGCGGCTGATGGTTCTGCGCG ACTACGCCGACATCAAGAATGTGGTCGTCAACGACCATGCGGTGGGGATCCTGTTCTCGGACAGGCCCGGGACGCGTGAA GCATTTCCCCGTGAGCTCTTTCCCGACCAAGCCCTGGCGCTGATATCCCGGTACACCAAGGTCAGTGGGAAGTGGTCACC TCCGCCGACACCGACGAATTGA
Upstream 100 bases:
>100_bases CATGGAACACCTCTCGTCGTTGGGGGTGGATCGATTCCACCGTACCGAAACGGAGCCGGGTCGATAGGCTGTGCGGGACA ACAGGGGCTAGGGGAGGGAC
Downstream 100 bases:
>100_bases CCCAGGCCGAATACTCGTCGAGCGCGGAGTTGAGCCGCTTGTGATCCACGCGCGTACCGAATTGCTGGGCACCGACCAGG ATGCTGAAACCGATGCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MTDQGPPGGLPIRTEVFFTEDGRARLAKGALQTIGRSRGVWILLALALLYVAFFFFFVGISAGVVILVVVAAAAALITSR IRARTRQSMRPIPAGTVQRAEFGASDFTFWALRPTPNALLGQSFLTTRLMVLRDYADIKNVVVNDHAVGILFSDRPGTRE AFPRELFPDQALALISRYTKVSGKWSPPPTPTN
Sequences:
>Translated_193_residues MTDQGPPGGLPIRTEVFFTEDGRARLAKGALQTIGRSRGVWILLALALLYVAFFFFFVGISAGVVILVVVAAAAALITSR IRARTRQSMRPIPAGTVQRAEFGASDFTFWALRPTPNALLGQSFLTTRLMVLRDYADIKNVVVNDHAVGILFSDRPGTRE AFPRELFPDQALALISRYTKVSGKWSPPPTPTN >Mature_192_residues TDQGPPGGLPIRTEVFFTEDGRARLAKGALQTIGRSRGVWILLALALLYVAFFFFFVGISAGVVILVVVAAAAALITSRI RARTRQSMRPIPAGTVQRAEFGASDFTFWALRPTPNALLGQSFLTTRLMVLRDYADIKNVVVNDHAVGILFSDRPGTREA FPRELFPDQALALISRYTKVSGKWSPPPTPTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21105; Mature: 20974
Theoretical pI: Translated: 11.53; Mature: 11.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDQGPPGGLPIRTEVFFTEDGRARLAKGALQTIGRSRGVWILLALALLYVAFFFFFVGI CCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH SAGVVILVVVAAAAALITSRIRARTRQSMRPIPAGTVQRAEFGASDFTFWALRPTPNALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEEEEEECCCCHHHH GQSFLTTRLMVLRDYADIKNVVVNDHAVGILFSDRPGTREAFPRELFPDQALALISRYTK HHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCCCHHCCCHHCCHHHHHHHHHHHHH VSGKWSPPPTPTN CCCCCCCCCCCCC >Mature Secondary Structure TDQGPPGGLPIRTEVFFTEDGRARLAKGALQTIGRSRGVWILLALALLYVAFFFFFVGI CCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH SAGVVILVVVAAAAALITSRIRARTRQSMRPIPAGTVQRAEFGASDFTFWALRPTPNALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEEEEEECCCCHHHH GQSFLTTRLMVLRDYADIKNVVVNDHAVGILFSDRPGTREAFPRELFPDQALALISRYTK HHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCCCHHCCCHHCCHHHHHHHHHHHHH VSGKWSPPPTPTN CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA