| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630160
Identifier: 169630160
GI number: 169630160
Start: 3124519
End: 3125022
Strand: Reverse
Name: 169630160
Synonym: MAB_3077c
Alternate gene names: NA
Gene position: 3125022-3124519 (Counterclockwise)
Preceding gene: 169630162
Following gene: 169630158
Centisome position: 61.67
GC content: 63.1
Gene sequence:
>504_bases ATGTCGCGTAAGTTGTTTGCGATTGCGGGAGCGGTCGCTGGCTTGGCTATATCGGCGGGAGCGGCGCTGCCTGCTGCCGC GGACCCGCAAAAGAACCCGTACCCGGATACCAGCAAATACGCCAAACTGGACTTCGAGGGTTTCCGGATCGCGGACAAGC CAGGTCTGTGGTTCTCGACGCCGTTCGGCTTGGACTGTGGCATCTGGGAGGACAGCAGCTTTGGGTGTACAGGCACGATC CCGGGTGCTCCCGGCGGCGCCAACCAGATTGGCTGGTTCAGGGGAGACTCGTCGGCGCACTTTGATAACACGGGGCAGCC CCGATTCTCGTCGGGCCAGGCCCAGCGCGTGCTGCCGGCGAACAACTACATAGAGCTCGGCAGTACCCGCTGCGCCACAA CGCCGGAGAACAATGTGTACTGCACCGGCGGCGGCAACTACGCGAGCTACACCAACCAGTTCATGGTGTCGCCCGGTAAG ACCTGGCTGGGCGCCCAGGATTAG
Upstream 100 bases:
>100_bases GAGCAGTTTCAGTTAACCGGTATGTGTATGATTTTCGGGATAAGACTGCATAAGACAGCTGCTGTGCAACTGTCATTAGG AAACAGGGGAGAGGCAAATC
Downstream 100 bases:
>100_bases GCACTGACACGAATCAGGCACTGACACGAATCAGGCACTGACACGCGGGGCGTGCGGCACCGGGCAGCCTGCCGGTGTCG CCGCCGTCGCGTCGTGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MSRKLFAIAGAVAGLAISAGAALPAAADPQKNPYPDTSKYAKLDFEGFRIADKPGLWFSTPFGLDCGIWEDSSFGCTGTI PGAPGGANQIGWFRGDSSAHFDNTGQPRFSSGQAQRVLPANNYIELGSTRCATTPENNVYCTGGGNYASYTNQFMVSPGK TWLGAQD
Sequences:
>Translated_167_residues MSRKLFAIAGAVAGLAISAGAALPAAADPQKNPYPDTSKYAKLDFEGFRIADKPGLWFSTPFGLDCGIWEDSSFGCTGTI PGAPGGANQIGWFRGDSSAHFDNTGQPRFSSGQAQRVLPANNYIELGSTRCATTPENNVYCTGGGNYASYTNQFMVSPGK TWLGAQD >Mature_166_residues SRKLFAIAGAVAGLAISAGAALPAAADPQKNPYPDTSKYAKLDFEGFRIADKPGLWFSTPFGLDCGIWEDSSFGCTGTIP GAPGGANQIGWFRGDSSAHFDNTGQPRFSSGQAQRVLPANNYIELGSTRCATTPENNVYCTGGGNYASYTNQFMVSPGKT WLGAQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17573; Mature: 17441
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKLFAIAGAVAGLAISAGAALPAAADPQKNPYPDTSKYAKLDFEGFRIADKPGLWFST CCCEEEEHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCEEEC PFGLDCGIWEDSSFGCTGTIPGAPGGANQIGWFRGDSSAHFDNTGQPRFSSGQAQRVLPA CCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCC NNYIELGSTRCATTPENNVYCTGGGNYASYTNQFMVSPGKTWLGAQD CCEEEECCCEECCCCCCCEEECCCCCCCCCCCEEEECCCCCCCCCCC >Mature Secondary Structure SRKLFAIAGAVAGLAISAGAALPAAADPQKNPYPDTSKYAKLDFEGFRIADKPGLWFST CCEEEEHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCEEEC PFGLDCGIWEDSSFGCTGTIPGAPGGANQIGWFRGDSSAHFDNTGQPRFSSGQAQRVLPA CCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCC NNYIELGSTRCATTPENNVYCTGGGNYASYTNQFMVSPGKTWLGAQD CCEEEECCCEECCCCCCCEEECCCCCCCCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA