| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630129
Identifier: 169630129
GI number: 169630129
Start: 3098688
End: 3100028
Strand: Direct
Name: 169630129
Synonym: MAB_3046
Alternate gene names: NA
Gene position: 3098688-3100028 (Clockwise)
Preceding gene: 169630124
Following gene: 169630133
Centisome position: 61.15
GC content: 69.13
Gene sequence:
>1341_bases ATGTCCGATCAGACACAGCCGGAACTCTCAACACAGCAAGAGCGTGTTACCCCCGTCCCCCGGCCGGGGCCGAAACCTCA TCCGATGCCGCGCCGTCCCGCGGCGCCGGCTCCCGCGGCTCACCATGTAGACCCCCACAAGTTCGGCCGGGTGGATGATG ACGGCACCGTGTGGCTGATCACGAGCGCCGGAGAACGCCAGATCGGGTCGTGGCAGGCCGGGGACGCCGACGCGGCGTAT GCGCATTTCGGACGCAGATTCGAAGATCTGGAGACGGAAGTCCAGCTGCTGGAACTGCGGCTCGGGTCCGGGTCAGGTGA CGCACGCAAGATCAAGACCGCCGCCGAGCACCTGGCCGAGACGCTGCCCGCCGCCGCGGTGCTCGGTGATGTGGACTCCC TGTCGGCACGGTTGTCGGCGCTCGTGGAGTCCGCGGACGCACAGGCAGCGGCGGCGCGTGCCCAGCGTGACGAGGCGCGC TCGGCCAGTATTTCCCGCAAGGAGGAGCTGGCCGCCGAAGCCGAGGAGCTGGCCGCCAACTCCACCCAGTGGAAGGCCGC CGGTGACCGGATCCGGGCCATTCTCGACGAGTGGAAGTCCATCCACGGTGTGGATCGCAAGACGGACGACGCGCTGTGGA AGCGGTATTCGACGGCACGGGAGACCTTCAACCGCAGACGCGGCGCCCATTTCGCCGAGCTGGACCGTGAGCGCGCCGGC GCCCGCGAGAAGAAGGAAGAACTCTGCAAGCGGGCCGAGGCGCTGTCGGATTCGACGGATTGGGGTGCGACCTCCGCGGC GTTCCGGAATCTGCTGAACGACTGGAAGGCCGCCGGGCGGGCACCGAGAGAGACCGACGACAACCTGTGGCACCGGTTCA AGGCCGCCCAGGACAAGTTCTTTGCCGCCCGCAACGCCGAATCCGCGTCCCGTGACGCCGAATTCGTGGCCAACGCGGAA GCAAAGCGCGCGCTGCTCGTCGAGGCGGAGAAAATCGATCCCGAGGCCGATGTCGACGCTGCCCGCGCGGCACTGCGCGC CATCGGCGACAAGTGGGACGCCATCGGGAAGGTTCCTCGCGAGCAGCAGGCCGACCTGGAGCGGCGCCTACGGGCGGTCG AGAAGAAGGTTCGCGAGGCCGGCGAATCCGGCTGGGGCGACCCGGAAGCCGAAGCACGTGCCGAACAGTTCCGCGACCGC GCACGCCAGTTCGAGGAGCAGGCGGCCAAGGCCGAGGCGGCCGGCAAGACCAAGGATGCCGAGAAGGCCCGCGCCAGCGC CCAGCAGTGGCAGGAATGGGCCGACGCCGCGGTGGCGGCCGTCAAGAGCCGCTCGCGCTAG
Upstream 100 bases:
>100_bases GGCATATGTTCGCCCGTGCGGCGATGACACCTGTTTGAATGAACGGTGTAGTGAGCTTAGGGCGCCGTGCTGCGCGGCAA CAATTGTAGGAAGAGGTTTC
Downstream 100 bases:
>100_bases CTACCCGTCCTACTTGTCGCGGTCCTCGTCATCCTCGAAGGCGTCGTCGAGGATGGTGCGCTGATCGCGCTTGGCGGCCT CACGCCGCTCCTGCTCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MSDQTQPELSTQQERVTPVPRPGPKPHPMPRRPAAPAPAAHHVDPHKFGRVDDDGTVWLITSAGERQIGSWQAGDADAAY AHFGRRFEDLETEVQLLELRLGSGSGDARKIKTAAEHLAETLPAAAVLGDVDSLSARLSALVESADAQAAAARAQRDEAR SASISRKEELAAEAEELAANSTQWKAAGDRIRAILDEWKSIHGVDRKTDDALWKRYSTARETFNRRRGAHFAELDRERAG AREKKEELCKRAEALSDSTDWGATSAAFRNLLNDWKAAGRAPRETDDNLWHRFKAAQDKFFAARNAESASRDAEFVANAE AKRALLVEAEKIDPEADVDAARAALRAIGDKWDAIGKVPREQQADLERRLRAVEKKVREAGESGWGDPEAEARAEQFRDR ARQFEEQAAKAEAAGKTKDAEKARASAQQWQEWADAAVAAVKSRSR
Sequences:
>Translated_446_residues MSDQTQPELSTQQERVTPVPRPGPKPHPMPRRPAAPAPAAHHVDPHKFGRVDDDGTVWLITSAGERQIGSWQAGDADAAY AHFGRRFEDLETEVQLLELRLGSGSGDARKIKTAAEHLAETLPAAAVLGDVDSLSARLSALVESADAQAAAARAQRDEAR SASISRKEELAAEAEELAANSTQWKAAGDRIRAILDEWKSIHGVDRKTDDALWKRYSTARETFNRRRGAHFAELDRERAG AREKKEELCKRAEALSDSTDWGATSAAFRNLLNDWKAAGRAPRETDDNLWHRFKAAQDKFFAARNAESASRDAEFVANAE AKRALLVEAEKIDPEADVDAARAALRAIGDKWDAIGKVPREQQADLERRLRAVEKKVREAGESGWGDPEAEARAEQFRDR ARQFEEQAAKAEAAGKTKDAEKARASAQQWQEWADAAVAAVKSRSR >Mature_445_residues SDQTQPELSTQQERVTPVPRPGPKPHPMPRRPAAPAPAAHHVDPHKFGRVDDDGTVWLITSAGERQIGSWQAGDADAAYA HFGRRFEDLETEVQLLELRLGSGSGDARKIKTAAEHLAETLPAAAVLGDVDSLSARLSALVESADAQAAAARAQRDEARS ASISRKEELAAEAEELAANSTQWKAAGDRIRAILDEWKSIHGVDRKTDDALWKRYSTARETFNRRRGAHFAELDRERAGA REKKEELCKRAEALSDSTDWGATSAAFRNLLNDWKAAGRAPRETDDNLWHRFKAAQDKFFAARNAESASRDAEFVANAEA KRALLVEAEKIDPEADVDAARAALRAIGDKWDAIGKVPREQQADLERRLRAVEKKVREAGESGWGDPEAEARAEQFRDRA RQFEEQAAKAEAAGKTKDAEKARASAQQWQEWADAAVAAVKSRSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49142; Mature: 49011
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDQTQPELSTQQERVTPVPRPGPKPHPMPRRPAAPAPAAHHVDPHKFGRVDDDGTVWLI CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEE TSAGERQIGSWQAGDADAAYAHFGRRFEDLETEVQLLELRLGSGSGDARKIKTAAEHLAE ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH TLPAAAVLGDVDSLSARLSALVESADAQAAAARAQRDEARSASISRKEELAAEAEELAAN HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC STQWKAAGDRIRAILDEWKSIHGVDRKTDDALWKRYSTARETFNRRRGAHFAELDRERAG CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC AREKKEELCKRAEALSDSTDWGATSAAFRNLLNDWKAAGRAPRETDDNLWHRFKAAQDKF CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH FAARNAESASRDAEFVANAEAKRALLVEAEKIDPEADVDAARAALRAIGDKWDAIGKVPR HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC EQQADLERRLRAVEKKVREAGESGWGDPEAEARAEQFRDRARQFEEQAAKAEAAGKTKDA HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH EKARASAQQWQEWADAAVAAVKSRSR HHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDQTQPELSTQQERVTPVPRPGPKPHPMPRRPAAPAPAAHHVDPHKFGRVDDDGTVWLI CCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEE TSAGERQIGSWQAGDADAAYAHFGRRFEDLETEVQLLELRLGSGSGDARKIKTAAEHLAE ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH TLPAAAVLGDVDSLSARLSALVESADAQAAAARAQRDEARSASISRKEELAAEAEELAAN HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC STQWKAAGDRIRAILDEWKSIHGVDRKTDDALWKRYSTARETFNRRRGAHFAELDRERAG CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC AREKKEELCKRAEALSDSTDWGATSAAFRNLLNDWKAAGRAPRETDDNLWHRFKAAQDKF CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH FAARNAESASRDAEFVANAEAKRALLVEAEKIDPEADVDAARAALRAIGDKWDAIGKVPR HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC EQQADLERRLRAVEKKVREAGESGWGDPEAEARAEQFRDRARQFEEQAAKAEAAGKTKDA HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH EKARASAQQWQEWADAAVAAVKSRSR HHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA