| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630081
Identifier: 169630081
GI number: 169630081
Start: 3059440
End: 3060102
Strand: Direct
Name: 169630081
Synonym: MAB_2998
Alternate gene names: NA
Gene position: 3059440-3060102 (Clockwise)
Preceding gene: 169630078
Following gene: 169630083
Centisome position: 60.38
GC content: 70.74
Gene sequence:
>663_bases ATGCCGGGCACCGGCTCCGACGACGACTTCATCAATCGGGCCTTCGGCCCCGCCCTCACGCAGGTGGGGGCGACCCTGAT CGCGGTACGCCCGGAGCCCGATGACCTGGTCAATGGGTATCGGCGGGCGCTGAATCAAGCTGCTCAGCTGGGACCCATCG TGGTCGGCGGGGTCTCCATCGGTACCGCAGTCGCCCTGACGTGGGCGTTGCAGAACCCGGAGGCGACGGTGGCAGTGTTG GCGGCGATGCCCGCGTGGACCGGGGCGCCGGAAAACTCGCCGGCTTCCGTGTCGGCACGGGTTACCGCCGAATCTTTGCG CTCCGACGGGCTGGCCGCGGTGACCGCGGCGATGCAGGCCAGCAGCCCCGCGTGGCTTGCCGCCGAGCTGACGCGCTCAT GGGCCGTGCAGTGGCCGGGCCTGCCCCACGCAATGGAAGAGGTGTCGGCATTCGTGAACCCGTCGGCCGCCGAGATCCGC GCGCTGAGCGTGCCGATGGCCGTGGCAGCAGCCACCGATGACCCGATCCATCCGCTGGAGGTCGGCCGCGACTGGGCGGC CTGGGCCCCACGGGCGGCGCTGCGTACCTTCACGCTGGATCAGCTCGGCGCAGACCCGGCCTGTCTGGGACGGGCGTGTA TCGCAGCACTGGCCGATATCTGA
Upstream 100 bases:
>100_bases GGTGTTCCGCACACCGGGCAAAATCAGGTGCGTGACGTCCATCAATGCCCTCCGCGCGGGCGGCTCATCGCCGAAACTTG GTGGCCACAGGGCTGTTCTC
Downstream 100 bases:
>100_bases GTCACCGTCCGCGGGCCGCCGGATCGGCGGTGGCTTCGATCTTGAGCACCAGGCCTTCGCGCACCGTGAGGGTAACCACC GCGAAGAGCCTGCGCTGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MPGTGSDDDFINRAFGPALTQVGATLIAVRPEPDDLVNGYRRALNQAAQLGPIVVGGVSIGTAVALTWALQNPEATVAVL AAMPAWTGAPENSPASVSARVTAESLRSDGLAAVTAAMQASSPAWLAAELTRSWAVQWPGLPHAMEEVSAFVNPSAAEIR ALSVPMAVAAATDDPIHPLEVGRDWAAWAPRAALRTFTLDQLGADPACLGRACIAALADI
Sequences:
>Translated_220_residues MPGTGSDDDFINRAFGPALTQVGATLIAVRPEPDDLVNGYRRALNQAAQLGPIVVGGVSIGTAVALTWALQNPEATVAVL AAMPAWTGAPENSPASVSARVTAESLRSDGLAAVTAAMQASSPAWLAAELTRSWAVQWPGLPHAMEEVSAFVNPSAAEIR ALSVPMAVAAATDDPIHPLEVGRDWAAWAPRAALRTFTLDQLGADPACLGRACIAALADI >Mature_219_residues PGTGSDDDFINRAFGPALTQVGATLIAVRPEPDDLVNGYRRALNQAAQLGPIVVGGVSIGTAVALTWALQNPEATVAVLA AMPAWTGAPENSPASVSARVTAESLRSDGLAAVTAAMQASSPAWLAAELTRSWAVQWPGLPHAMEEVSAFVNPSAAEIRA LSVPMAVAAATDDPIHPLEVGRDWAAWAPRAALRTFTLDQLGADPACLGRACIAALADI
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22624; Mature: 22493
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGTGSDDDFINRAFGPALTQVGATLIAVRPEPDDLVNGYRRALNQAAQLGPIVVGGVSI CCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEECCHH GTAVALTWALQNPEATVAVLAAMPAWTGAPENSPASVSARVTAESLRSDGLAAVTAAMQA HHHHHEEEEECCCCHHHHHEECCCCCCCCCCCCCCCEEEHEEHHHHHCCCHHHHHHHHHC SSPAWLAAELTRSWAVQWPGLPHAMEEVSAFVNPSAAEIRALSVPMAVAAATDDPIHPLE CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCEEEEECCCCCCCHHH VGRDWAAWAPRAALRTFTLDQLGADPACLGRACIAALADI HCCCHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure PGTGSDDDFINRAFGPALTQVGATLIAVRPEPDDLVNGYRRALNQAAQLGPIVVGGVSI CCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEECCHH GTAVALTWALQNPEATVAVLAAMPAWTGAPENSPASVSARVTAESLRSDGLAAVTAAMQA HHHHHEEEEECCCCHHHHHEECCCCCCCCCCCCCCCEEEHEEHHHHHCCCHHHHHHHHHC SSPAWLAAELTRSWAVQWPGLPHAMEEVSAFVNPSAAEIRALSVPMAVAAATDDPIHPLE CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCEEEEECCCCCCCHHH VGRDWAAWAPRAALRTFTLDQLGADPACLGRACIAALADI HCCCHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA