Click here to switch to the map view.

The map label for this gene is 169630051

Identifier: 169630051

GI number: 169630051

Start: 3028620

End: 3029339

Strand: Direct

Name: 169630051

Synonym: MAB_2968

Alternate gene names: NA

Gene position: 3028620-3029339 (Clockwise)

Preceding gene: 169630047

Following gene: 169630052

Centisome position: 59.77

GC content: 62.92

Gene sequence:

>720_bases
GTGAGCACAGCCATCGCGTCCAAGGCCGCCCCGGTCGCCGCCCGGCGCGGTGACCGGCGCAAGGTTGCCCGGGAAGAATT
GTTGGATGCCGCGTTTCGCGCCATCGACGGCCTGGGCGCCACCGTCAGCATGGACGACATCGCTCGCGAGGCCGGGGTCG
CCAAACCGAAGCTGTACCGCTACTTCGAAGACAAAGCCGATCTGCACAGCGCCGTGCTGGAACGGGTCCAGGACATGCTC
TGGAGCGCGTCCATGGATCGGATCAACCTGATGACCGACTCCGCCCGCGACCTGGTCGAGCATGGCGCCAACGAGTACGC
ACAGATGATCTCGGATCATCCGAATGTGTTGCGCTTCATCGTGCACGGTCATTTCATCAACTCCAGCGACGGCACCGAAC
GTTTGGTGGAGACCGCGCAGCAGATGACACACGACATCGCGGAGATACTGTCGAGTGCGATCGATGACGAGACAGTTGAT
ATCGACGACGCCGATCTGGCGGTCAGCTCGGCCGCCGGAGCGATCGGCACGGCGACCGAATGGTTCTTGGGGCCCAACCA
GTTACGTGCCGACCCCATGCCCATCGAGAGGTTCGTGGAGTATCTGACCACGGTGCTGTCGGGCCTTGCCGCGTCGATCG
CCGAATTCAACGGACTCACCCTCGATCCCGATCAGCCGCTACATCTGGCATTCACCCGGATCCAGGGTGGAGCCTCATGA

Upstream 100 bases:

>100_bases
CGCAGCACGAGCACAATAGGCAGCACGAGCGTGTCCCCCGAACCGGACAGCTAACGGCCGGGCACACGTACCATCACTGG
TGATGAGAGGCGTGGAAAAC

Downstream 100 bases:

>100_bases
GCGACCGAGTCCCCTTGGCGCGCATCAACCGTGGCCGCGCACTGGGAAAGCTGGCCGCCGGGCAGGCCGTACGGACCGCG
AGCAGTCGCCTCTCCATGAT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulatory Protein TetR; Transcriptional Regulator TetR Family; AsnC Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulatory Protein; TetR-Family Transcriptional Regulator; Tetr Family Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MSTAIASKAAPVAARRGDRRKVAREELLDAAFRAIDGLGATVSMDDIAREAGVAKPKLYRYFEDKADLHSAVLERVQDML
WSASMDRINLMTDSARDLVEHGANEYAQMISDHPNVLRFIVHGHFINSSDGTERLVETAQQMTHDIAEILSSAIDDETVD
IDDADLAVSSAAGAIGTATEWFLGPNQLRADPMPIERFVEYLTTVLSGLAASIAEFNGLTLDPDQPLHLAFTRIQGGAS

Sequences:

>Translated_239_residues
MSTAIASKAAPVAARRGDRRKVAREELLDAAFRAIDGLGATVSMDDIAREAGVAKPKLYRYFEDKADLHSAVLERVQDML
WSASMDRINLMTDSARDLVEHGANEYAQMISDHPNVLRFIVHGHFINSSDGTERLVETAQQMTHDIAEILSSAIDDETVD
IDDADLAVSSAAGAIGTATEWFLGPNQLRADPMPIERFVEYLTTVLSGLAASIAEFNGLTLDPDQPLHLAFTRIQGGAS
>Mature_238_residues
STAIASKAAPVAARRGDRRKVAREELLDAAFRAIDGLGATVSMDDIAREAGVAKPKLYRYFEDKADLHSAVLERVQDMLW
SASMDRINLMTDSARDLVEHGANEYAQMISDHPNVLRFIVHGHFINSSDGTERLVETAQQMTHDIAEILSSAIDDETVDI
DDADLAVSSAAGAIGTATEWFLGPNQLRADPMPIERFVEYLTTVLSGLAASIAEFNGLTLDPDQPLHLAFTRIQGGAS

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25968; Mature: 25837

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTAIASKAAPVAARRGDRRKVAREELLDAAFRAIDGLGATVSMDDIAREAGVAKPKLYR
CCCCHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHH
YFEDKADLHSAVLERVQDMLWSASMDRINLMTDSARDLVEHGANEYAQMISDHPNVLRFI
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHH
VHGHFINSSDGTERLVETAQQMTHDIAEILSSAIDDETVDIDDADLAVSSAAGAIGTATE
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHH
WFLGPNQLRADPMPIERFVEYLTTVLSGLAASIAEFNGLTLDPDQPLHLAFTRIQGGAS
HHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure 
STAIASKAAPVAARRGDRRKVAREELLDAAFRAIDGLGATVSMDDIAREAGVAKPKLYR
CCCHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHH
YFEDKADLHSAVLERVQDMLWSASMDRINLMTDSARDLVEHGANEYAQMISDHPNVLRFI
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHH
VHGHFINSSDGTERLVETAQQMTHDIAEILSSAIDDETVDIDDADLAVSSAAGAIGTATE
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHH
WFLGPNQLRADPMPIERFVEYLTTVLSGLAASIAEFNGLTLDPDQPLHLAFTRIQGGAS
HHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA