| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630004
Identifier: 169630004
GI number: 169630004
Start: 2974578
End: 2975018
Strand: Direct
Name: 169630004
Synonym: MAB_2921
Alternate gene names: NA
Gene position: 2974578-2975018 (Clockwise)
Preceding gene: 169630000
Following gene: 169630011
Centisome position: 58.7
GC content: 59.86
Gene sequence:
>441_bases ATGGGTGGCCGACGAGCAGGACGCACACCGAGTAAGTGCCGTGCTGATCTCGTTCCACTGCTGGAAGCTCCAGAAGCTCA TAGCCGCGGTCCCTCAGCCCAGCCGTCTTTCAAAACGACCAGCGCATCCGACCTTGTGGCACAAAGTATCGGCACTTTTG AGCGTGCGACAGAGCACGGTGTGCCCAAGTCGGCAGGCACTCCCGCTGACGCGCTGCTTCTGGGCTACACCTTCGATGAC TACGATCTTCGCACCGCGTTCACGTGGAAATTCCTGCGCAGCGCCGACCGCCGCCAAGTCGCTGCCGTCATCAACGGAGT GCTCGAAAGCGATACGAAACTGGTAACCGGAACCATTCTGCGGCGGCTTTTGATCCGACCGAGGGCGCAACGGAGCTCGG GGCGCGAGTTTTTGGTCTTTATACGGGAATTGACGGCGTAA
Upstream 100 bases:
>100_bases CTTGTGGATGCGCAGAACGCGCGGGCAGCCAACTAGTCCGGCACGATGGTGACCTGATCACCGGTGGGTGTGCGGCACAC GCGGATCTCGGCGGGAGCAC
Downstream 100 bases:
>100_bases CTCCCCCACCGTATTGGGGGATCAGTTGCCCAGCCACGTTGGTGCCTTCTGGCACCCGTTGGCGGAACGATGCAACCCGA ACGACGCCAGGGCGCATCGG
Product: putative bacteriophage protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MGGRRAGRTPSKCRADLVPLLEAPEAHSRGPSAQPSFKTTSASDLVAQSIGTFERATEHGVPKSAGTPADALLLGYTFDD YDLRTAFTWKFLRSADRRQVAAVINGVLESDTKLVTGTILRRLLIRPRAQRSSGREFLVFIRELTA
Sequences:
>Translated_146_residues MGGRRAGRTPSKCRADLVPLLEAPEAHSRGPSAQPSFKTTSASDLVAQSIGTFERATEHGVPKSAGTPADALLLGYTFDD YDLRTAFTWKFLRSADRRQVAAVINGVLESDTKLVTGTILRRLLIRPRAQRSSGREFLVFIRELTA >Mature_145_residues GGRRAGRTPSKCRADLVPLLEAPEAHSRGPSAQPSFKTTSASDLVAQSIGTFERATEHGVPKSAGTPADALLLGYTFDDY DLRTAFTWKFLRSADRRQVAAVINGVLESDTKLVTGTILRRLLIRPRAQRSSGREFLVFIRELTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15958; Mature: 15827
Theoretical pI: Translated: 10.92; Mature: 10.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGRRAGRTPSKCRADLVPLLEAPEAHSRGPSAQPSFKTTSASDLVAQSIGTFERATEHG CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC VPKSAGTPADALLLGYTFDDYDLRTAFTWKFLRSADRRQVAAVINGVLESDTKLVTGTIL CCCCCCCCHHHEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHH RRLLIRPRAQRSSGREFLVFIRELTA HHHHHCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure GGRRAGRTPSKCRADLVPLLEAPEAHSRGPSAQPSFKTTSASDLVAQSIGTFERATEHG CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC VPKSAGTPADALLLGYTFDDYDLRTAFTWKFLRSADRRQVAAVINGVLESDTKLVTGTIL CCCCCCCCHHHEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHH RRLLIRPRAQRSSGREFLVFIRELTA HHHHHCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA