Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

Click here to switch to the map view.

The map label for this gene is 169629994

Identifier: 169629994

GI number: 169629994

Start: 2960235

End: 2961257

Strand: Reverse

Name: 169629994

Synonym: MAB_2911c

Alternate gene names: NA

Gene position: 2961257-2960235 (Counterclockwise)

Preceding gene: 169629995

Following gene: 169629993

Centisome position: 58.44

GC content: 65.1

Gene sequence:

>1023_bases
ATGAGCCGCGCCACCGACCAGTCGCAGCGGCTCAGCGACACGGCGCTGACCGTTGACATGCATACCCACGGGCTCAGCAT
CATGCCGAGATGGCTGCGTGCGGTGGGTGGCAAGACGATAGACATGCCGGCAGCGCCGTTATCGAAGCTGTCTGAGGGCA
AGGTGAATCTGGCGATCGTGACAGTGGTCGGCGATGCCGCGCTGGGCACCGCATGGCGACTGCGCTCTCCGTGGCACGGC
GTGAGGGCGCAGCTGGACCTGGCGCGTGCGGAGGCTTCGGCAGCAGGTATCGCGGTGGTGGATACCGTCGAACAGATCGC
GGACGGCGGCGCCGCGACGGTGATGCTCGGCATCGAGGGCGCCGATGTCGTGAGTGCGCAGCCGGATCGGTTGGCCGAGC
TTTACCGGCTCGGCGTGCGCGTGCTCGGGCTGGTGCACTACGCGGACAATGGCCTCGGGACGATAAGTACCTCGTTATCC
GGGAGTCGGGGGAGTAGGGCCGTGCGGGCCGGTCGCTATTCCCCTGGTCTGACTGCTTTCGGGAAAGAGGTTGTCGCAGA
ATCCAACCGGCTCGGCATGCTGATCGACTTGGCGCATGCCGACGCGGCGACAACCTTGGCGGTATGCGATCACACCCGCG
TTCCCGTGGTCAGTTCGCATACCGGAGCAGCGGCGGTACAGGAGTTTCCCCGCTACATCGGCGACGAGGAAGCGCGTGCG
ATAGCCGCCACCGGTGGGCTGATCGGGCTGTGGCCGATGGGTTTTCGGCGCCTGGGAATGCGTGATGTCGATGACTTTGC
GCGCCATGCCTCGTATCTGGCTGAGTTGGTCGGTCCACGCCACCTATGTATCGGGACAGACATGAATGGCATTCCGGGGT
ACGCCAAGGGGTTCGACGGGCCCACTGGATTCCCGACGCTGGTAGAGGCGTTGCTGCACACGGGTTTCGATACCGCCGAA
GTCACCGCGATCCTCGGCGGCAATGCCCAGCGTGTTCTGAAGGAAGCACTACCCGGCGCGTAG

Upstream 100 bases:

>100_bases
GGGTGGTTTCAGTTCCAGCCGCTATGGGACGACGTGATCAGAACGGCTCCAGAGGCCCTTCATTGAGCTCGCCGACACCC
GGAATCGGGAATTGTCACCG

Downstream 100 bases:

>100_bases
CCGAGCGCTTTGATGACGCGCACCGTCAAACAAAAGGAGTTCTACCGGTGAAGATCCAGATCGAGACCAACGCGGCCCCA
GATCCCGTCGGCGCGTATTC

Product: putative dipeptidase

Products: NA

Alternate protein names: ORF X [H]

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MSRATDQSQRLSDTALTVDMHTHGLSIMPRWLRAVGGKTIDMPAAPLSKLSEGKVNLAIVTVVGDAALGTAWRLRSPWHG
VRAQLDLARAEASAAGIAVVDTVEQIADGGAATVMLGIEGADVVSAQPDRLAELYRLGVRVLGLVHYADNGLGTISTSLS
GSRGSRAVRAGRYSPGLTAFGKEVVAESNRLGMLIDLAHADAATTLAVCDHTRVPVVSSHTGAAAVQEFPRYIGDEEARA
IAATGGLIGLWPMGFRRLGMRDVDDFARHASYLAELVGPRHLCIGTDMNGIPGYAKGFDGPTGFPTLVEALLHTGFDTAE
VTAILGGNAQRVLKEALPGA

Sequences:

>Translated_340_residues
MSRATDQSQRLSDTALTVDMHTHGLSIMPRWLRAVGGKTIDMPAAPLSKLSEGKVNLAIVTVVGDAALGTAWRLRSPWHG
VRAQLDLARAEASAAGIAVVDTVEQIADGGAATVMLGIEGADVVSAQPDRLAELYRLGVRVLGLVHYADNGLGTISTSLS
GSRGSRAVRAGRYSPGLTAFGKEVVAESNRLGMLIDLAHADAATTLAVCDHTRVPVVSSHTGAAAVQEFPRYIGDEEARA
IAATGGLIGLWPMGFRRLGMRDVDDFARHASYLAELVGPRHLCIGTDMNGIPGYAKGFDGPTGFPTLVEALLHTGFDTAE
VTAILGGNAQRVLKEALPGA
>Mature_339_residues
SRATDQSQRLSDTALTVDMHTHGLSIMPRWLRAVGGKTIDMPAAPLSKLSEGKVNLAIVTVVGDAALGTAWRLRSPWHGV
RAQLDLARAEASAAGIAVVDTVEQIADGGAATVMLGIEGADVVSAQPDRLAELYRLGVRVLGLVHYADNGLGTISTSLSG
SRGSRAVRAGRYSPGLTAFGKEVVAESNRLGMLIDLAHADAATTLAVCDHTRVPVVSSHTGAAAVQEFPRYIGDEEARAI
AATGGLIGLWPMGFRRLGMRDVDDFARHASYLAELVGPRHLCIGTDMNGIPGYAKGFDGPTGFPTLVEALLHTGFDTAEV
TAILGGNAQRVLKEALPGA

Specific function: Unknown

COG id: COG2355

COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M19 family [H]

Homologues:

Organism=Homo sapiens, GI11641269, Length=255, Percent_Identity=29.0196078431373, Blast_Score=108, Evalue=6e-24,
Organism=Homo sapiens, GI189458885, Length=239, Percent_Identity=30.5439330543933, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI4758190, Length=239, Percent_Identity=30.5439330543933, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI193211608, Length=257, Percent_Identity=28.4046692607004, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI193211610, Length=256, Percent_Identity=28.125, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI281362638, Length=262, Percent_Identity=30.1526717557252, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI281362636, Length=262, Percent_Identity=30.1526717557252, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI161083233, Length=265, Percent_Identity=30.9433962264151, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI221475880, Length=223, Percent_Identity=29.1479820627803, Blast_Score=96, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008257 [H]

Pfam domain/function: PF01244 Peptidase_M19 [H]

EC number: NA

Molecular weight: Translated: 35534; Mature: 35403

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS00869 RENAL_DIPEPTIDASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRATDQSQRLSDTALTVDMHTHGLSIMPRWLRAVGGKTIDMPAAPLSKLSEGKVNLAIV
CCCCCCHHHHCCCCEEEEEEECCCHHHHHHHHHHHCCCEECCCCCHHHHHCCCCEEEEEE
TVVGDAALGTAWRLRSPWHGVRAQLDLARAEASAAGIAVVDTVEQIADGGAATVMLGIEG
EEECCCHHCCHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCC
ADVVSAQPDRLAELYRLGVRVLGLVHYADNGLGTISTSLSGSRGSRAVRAGRYSPGLTAF
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHCCCCCCCHHHH
GKEVVAESNRLGMLIDLAHADAATTLAVCDHTRVPVVSSHTGAAAVQEFPRYIGDEEARA
HHHHHHCCCCCEEEEEECCCCCHHEEEEECCCCCCEEECCCCHHHHHHHHHHHCCHHHHE
IAATGGLIGLWPMGFRRLGMRDVDDFARHASYLAELVGPRHLCIGTDMNGIPGYAKGFDG
EEECCCEEEECHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCC
PTGFPTLVEALLHTGFDTAEVTAILGGNAQRVLKEALPGA
CCCHHHHHHHHHHCCCCHHHEEEEECCCHHHHHHHHCCCC
>Mature Secondary Structure 
SRATDQSQRLSDTALTVDMHTHGLSIMPRWLRAVGGKTIDMPAAPLSKLSEGKVNLAIV
CCCCCHHHHCCCCEEEEEEECCCHHHHHHHHHHHCCCEECCCCCHHHHHCCCCEEEEEE
TVVGDAALGTAWRLRSPWHGVRAQLDLARAEASAAGIAVVDTVEQIADGGAATVMLGIEG
EEECCCHHCCHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCC
ADVVSAQPDRLAELYRLGVRVLGLVHYADNGLGTISTSLSGSRGSRAVRAGRYSPGLTAF
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHCCCCCCCHHHH
GKEVVAESNRLGMLIDLAHADAATTLAVCDHTRVPVVSSHTGAAAVQEFPRYIGDEEARA
HHHHHHCCCCCEEEEEECCCCCHHEEEEECCCCCCEEECCCCHHHHHHHHHHHCCHHHHE
IAATGGLIGLWPMGFRRLGMRDVDDFARHASYLAELVGPRHLCIGTDMNGIPGYAKGFDG
EEECCCEEEECHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCC
PTGFPTLVEALLHTGFDTAEVTAILGGNAQRVLKEALPGA
CCCHHHHHHHHHHCCCCHHHEEEEECCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1313537 [H]