| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629994
Identifier: 169629994
GI number: 169629994
Start: 2960235
End: 2961257
Strand: Reverse
Name: 169629994
Synonym: MAB_2911c
Alternate gene names: NA
Gene position: 2961257-2960235 (Counterclockwise)
Preceding gene: 169629995
Following gene: 169629993
Centisome position: 58.44
GC content: 65.1
Gene sequence:
>1023_bases ATGAGCCGCGCCACCGACCAGTCGCAGCGGCTCAGCGACACGGCGCTGACCGTTGACATGCATACCCACGGGCTCAGCAT CATGCCGAGATGGCTGCGTGCGGTGGGTGGCAAGACGATAGACATGCCGGCAGCGCCGTTATCGAAGCTGTCTGAGGGCA AGGTGAATCTGGCGATCGTGACAGTGGTCGGCGATGCCGCGCTGGGCACCGCATGGCGACTGCGCTCTCCGTGGCACGGC GTGAGGGCGCAGCTGGACCTGGCGCGTGCGGAGGCTTCGGCAGCAGGTATCGCGGTGGTGGATACCGTCGAACAGATCGC GGACGGCGGCGCCGCGACGGTGATGCTCGGCATCGAGGGCGCCGATGTCGTGAGTGCGCAGCCGGATCGGTTGGCCGAGC TTTACCGGCTCGGCGTGCGCGTGCTCGGGCTGGTGCACTACGCGGACAATGGCCTCGGGACGATAAGTACCTCGTTATCC GGGAGTCGGGGGAGTAGGGCCGTGCGGGCCGGTCGCTATTCCCCTGGTCTGACTGCTTTCGGGAAAGAGGTTGTCGCAGA ATCCAACCGGCTCGGCATGCTGATCGACTTGGCGCATGCCGACGCGGCGACAACCTTGGCGGTATGCGATCACACCCGCG TTCCCGTGGTCAGTTCGCATACCGGAGCAGCGGCGGTACAGGAGTTTCCCCGCTACATCGGCGACGAGGAAGCGCGTGCG ATAGCCGCCACCGGTGGGCTGATCGGGCTGTGGCCGATGGGTTTTCGGCGCCTGGGAATGCGTGATGTCGATGACTTTGC GCGCCATGCCTCGTATCTGGCTGAGTTGGTCGGTCCACGCCACCTATGTATCGGGACAGACATGAATGGCATTCCGGGGT ACGCCAAGGGGTTCGACGGGCCCACTGGATTCCCGACGCTGGTAGAGGCGTTGCTGCACACGGGTTTCGATACCGCCGAA GTCACCGCGATCCTCGGCGGCAATGCCCAGCGTGTTCTGAAGGAAGCACTACCCGGCGCGTAG
Upstream 100 bases:
>100_bases GGGTGGTTTCAGTTCCAGCCGCTATGGGACGACGTGATCAGAACGGCTCCAGAGGCCCTTCATTGAGCTCGCCGACACCC GGAATCGGGAATTGTCACCG
Downstream 100 bases:
>100_bases CCGAGCGCTTTGATGACGCGCACCGTCAAACAAAAGGAGTTCTACCGGTGAAGATCCAGATCGAGACCAACGCGGCCCCA GATCCCGTCGGCGCGTATTC
Product: putative dipeptidase
Products: NA
Alternate protein names: ORF X [H]
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MSRATDQSQRLSDTALTVDMHTHGLSIMPRWLRAVGGKTIDMPAAPLSKLSEGKVNLAIVTVVGDAALGTAWRLRSPWHG VRAQLDLARAEASAAGIAVVDTVEQIADGGAATVMLGIEGADVVSAQPDRLAELYRLGVRVLGLVHYADNGLGTISTSLS GSRGSRAVRAGRYSPGLTAFGKEVVAESNRLGMLIDLAHADAATTLAVCDHTRVPVVSSHTGAAAVQEFPRYIGDEEARA IAATGGLIGLWPMGFRRLGMRDVDDFARHASYLAELVGPRHLCIGTDMNGIPGYAKGFDGPTGFPTLVEALLHTGFDTAE VTAILGGNAQRVLKEALPGA
Sequences:
>Translated_340_residues MSRATDQSQRLSDTALTVDMHTHGLSIMPRWLRAVGGKTIDMPAAPLSKLSEGKVNLAIVTVVGDAALGTAWRLRSPWHG VRAQLDLARAEASAAGIAVVDTVEQIADGGAATVMLGIEGADVVSAQPDRLAELYRLGVRVLGLVHYADNGLGTISTSLS GSRGSRAVRAGRYSPGLTAFGKEVVAESNRLGMLIDLAHADAATTLAVCDHTRVPVVSSHTGAAAVQEFPRYIGDEEARA IAATGGLIGLWPMGFRRLGMRDVDDFARHASYLAELVGPRHLCIGTDMNGIPGYAKGFDGPTGFPTLVEALLHTGFDTAE VTAILGGNAQRVLKEALPGA >Mature_339_residues SRATDQSQRLSDTALTVDMHTHGLSIMPRWLRAVGGKTIDMPAAPLSKLSEGKVNLAIVTVVGDAALGTAWRLRSPWHGV RAQLDLARAEASAAGIAVVDTVEQIADGGAATVMLGIEGADVVSAQPDRLAELYRLGVRVLGLVHYADNGLGTISTSLSG SRGSRAVRAGRYSPGLTAFGKEVVAESNRLGMLIDLAHADAATTLAVCDHTRVPVVSSHTGAAAVQEFPRYIGDEEARAI AATGGLIGLWPMGFRRLGMRDVDDFARHASYLAELVGPRHLCIGTDMNGIPGYAKGFDGPTGFPTLVEALLHTGFDTAEV TAILGGNAQRVLKEALPGA
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M19 family [H]
Homologues:
Organism=Homo sapiens, GI11641269, Length=255, Percent_Identity=29.0196078431373, Blast_Score=108, Evalue=6e-24, Organism=Homo sapiens, GI189458885, Length=239, Percent_Identity=30.5439330543933, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI4758190, Length=239, Percent_Identity=30.5439330543933, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI193211608, Length=257, Percent_Identity=28.4046692607004, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI193211610, Length=256, Percent_Identity=28.125, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI281362638, Length=262, Percent_Identity=30.1526717557252, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI281362636, Length=262, Percent_Identity=30.1526717557252, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI161083233, Length=265, Percent_Identity=30.9433962264151, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI221475880, Length=223, Percent_Identity=29.1479820627803, Blast_Score=96, Evalue=4e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008257 [H]
Pfam domain/function: PF01244 Peptidase_M19 [H]
EC number: NA
Molecular weight: Translated: 35534; Mature: 35403
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS00869 RENAL_DIPEPTIDASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRATDQSQRLSDTALTVDMHTHGLSIMPRWLRAVGGKTIDMPAAPLSKLSEGKVNLAIV CCCCCCHHHHCCCCEEEEEEECCCHHHHHHHHHHHCCCEECCCCCHHHHHCCCCEEEEEE TVVGDAALGTAWRLRSPWHGVRAQLDLARAEASAAGIAVVDTVEQIADGGAATVMLGIEG EEECCCHHCCHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCC ADVVSAQPDRLAELYRLGVRVLGLVHYADNGLGTISTSLSGSRGSRAVRAGRYSPGLTAF CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHCCCCCCCHHHH GKEVVAESNRLGMLIDLAHADAATTLAVCDHTRVPVVSSHTGAAAVQEFPRYIGDEEARA HHHHHHCCCCCEEEEEECCCCCHHEEEEECCCCCCEEECCCCHHHHHHHHHHHCCHHHHE IAATGGLIGLWPMGFRRLGMRDVDDFARHASYLAELVGPRHLCIGTDMNGIPGYAKGFDG EEECCCEEEECHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCC PTGFPTLVEALLHTGFDTAEVTAILGGNAQRVLKEALPGA CCCHHHHHHHHHHCCCCHHHEEEEECCCHHHHHHHHCCCC >Mature Secondary Structure SRATDQSQRLSDTALTVDMHTHGLSIMPRWLRAVGGKTIDMPAAPLSKLSEGKVNLAIV CCCCCHHHHCCCCEEEEEEECCCHHHHHHHHHHHCCCEECCCCCHHHHHCCCCEEEEEE TVVGDAALGTAWRLRSPWHGVRAQLDLARAEASAAGIAVVDTVEQIADGGAATVMLGIEG EEECCCHHCCHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCC ADVVSAQPDRLAELYRLGVRVLGLVHYADNGLGTISTSLSGSRGSRAVRAGRYSPGLTAF CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHCCCCCCCHHHH GKEVVAESNRLGMLIDLAHADAATTLAVCDHTRVPVVSSHTGAAAVQEFPRYIGDEEARA HHHHHHCCCCCEEEEEECCCCCHHEEEEECCCCCCEEECCCCHHHHHHHHHHHCCHHHHE IAATGGLIGLWPMGFRRLGMRDVDDFARHASYLAELVGPRHLCIGTDMNGIPGYAKGFDG EEECCCEEEECHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCC PTGFPTLVEALLHTGFDTAEVTAILGGNAQRVLKEALPGA CCCHHHHHHHHHHCCCCHHHEEEEECCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1313537 [H]