| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629948
Identifier: 169629948
GI number: 169629948
Start: 2917094
End: 2918002
Strand: Reverse
Name: 169629948
Synonym: MAB_2864c
Alternate gene names: NA
Gene position: 2918002-2917094 (Counterclockwise)
Preceding gene: 169629949
Following gene: 169629944
Centisome position: 57.59
GC content: 64.58
Gene sequence:
>909_bases GTGCTGCATCTCAGGGTGATCGCACCCGCCGAGGTTTCGGATCAGGTGGTCGAATTCCTTTCCACCACCACGGGAGTCAC GCATATCGTGCGCGTGCCCCAGGCTGCCATCAGCCCGGCAGGTGACCTCATCACCGCCGACGTGGCGCGCGAGACCGCCA ACGATGTGCTCGACGGGCTCAAGTCGATCGATATCGACAAGCGTGGATCGATCACCGCCGAGGTGCTCGACACCGTCATC TCGCAGACCGCCTATGAGGCCGAGGATGACGCGGAAGGCGACCCCGCGGACGCGGTGATTTGGGACGAGCTGATCGGGCG CACGCGTGAGGAGTCCACCCTCAACCTAACGTTTCTCGCCTTCCTTTGTTTGGCCTGCCTGATCGCCGCGGTTGGCGTGG TCACCGATTCACCGGTCACCATTGTGGGCGCAATGGTGGTTGGGCCAGAGTTCGGTCCGCTTGCCGCCCTGGCAGTTTCG ATTGTGCGGCGTAAATGGTCGCTGGCCCGACGGTCACTACTGGCCTTGCTCGTGGGTTTCCCGGTGGCAATGGGGGTGAC TGCGGTCGGAGCCCTGGCTGCCGAGGCCGCCGGATGGGTGACCTTGAAGAGTGTGCGTGAGCTGCAGCAGGTCGACTTCG TCTTCCAGGTGGGGCCGTTCTCCTTGGTGGTGGCCCTCTTGGCAGGCGCGGCGGGCATGCTCTCGCTGATGTCGGCGAAA TCCGCTGCCCTGGTTGGGGTTTTCATCTCCGTGACCACCGTTCCGGCCGCAGGTTTCGCGGTGGTCGCGGCGACGGTGGG GGAATGGGATATTGCCGGACTGTCGGCGCTTCAGCTGGCCGTCAACCTCTTCGGCATTGTGCTGGCGGGCGTGCTGGTCT TGTGGGTGCGACCGCGCGGATACCGTTAG
Upstream 100 bases:
>100_bases CGCGCCCGCGCCGATCACCGCGGCACAGCGCAAGGAGTCCGGGATTGACGCCAAACCCGAGAAGGCCGAGAAGGCGGGTA AGCCGGCGGACGCGTAGCCA
Downstream 100 bases:
>100_bases GAGAGCTCCCCGATAGCGGTGACTCGCTGATCGAATTCTTCATCGGGATCGGTGTGCGCCAGGACCGGGTCACCGTATTC GTGCGGCCGCGAGACGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MLHLRVIAPAEVSDQVVEFLSTTTGVTHIVRVPQAAISPAGDLITADVARETANDVLDGLKSIDIDKRGSITAEVLDTVI SQTAYEAEDDAEGDPADAVIWDELIGRTREESTLNLTFLAFLCLACLIAAVGVVTDSPVTIVGAMVVGPEFGPLAALAVS IVRRKWSLARRSLLALLVGFPVAMGVTAVGALAAEAAGWVTLKSVRELQQVDFVFQVGPFSLVVALLAGAAGMLSLMSAK SAALVGVFISVTTVPAAGFAVVAATVGEWDIAGLSALQLAVNLFGIVLAGVLVLWVRPRGYR
Sequences:
>Translated_302_residues MLHLRVIAPAEVSDQVVEFLSTTTGVTHIVRVPQAAISPAGDLITADVARETANDVLDGLKSIDIDKRGSITAEVLDTVI SQTAYEAEDDAEGDPADAVIWDELIGRTREESTLNLTFLAFLCLACLIAAVGVVTDSPVTIVGAMVVGPEFGPLAALAVS IVRRKWSLARRSLLALLVGFPVAMGVTAVGALAAEAAGWVTLKSVRELQQVDFVFQVGPFSLVVALLAGAAGMLSLMSAK SAALVGVFISVTTVPAAGFAVVAATVGEWDIAGLSALQLAVNLFGIVLAGVLVLWVRPRGYR >Mature_302_residues MLHLRVIAPAEVSDQVVEFLSTTTGVTHIVRVPQAAISPAGDLITADVARETANDVLDGLKSIDIDKRGSITAEVLDTVI SQTAYEAEDDAEGDPADAVIWDELIGRTREESTLNLTFLAFLCLACLIAAVGVVTDSPVTIVGAMVVGPEFGPLAALAVS IVRRKWSLARRSLLALLVGFPVAMGVTAVGALAAEAAGWVTLKSVRELQQVDFVFQVGPFSLVVALLAGAAGMLSLMSAK SAALVGVFISVTTVPAAGFAVVAATVGEWDIAGLSALQLAVNLFGIVLAGVLVLWVRPRGYR
Specific function: Unknown
COG id: COG1808
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31373; Mature: 31373
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHLRVIAPAEVSDQVVEFLSTTTGVTHIVRVPQAAISPAGDLITADVARETANDVLDGL CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHH KSIDIDKRGSITAEVLDTVISQTAYEAEDDAEGDPADAVIWDELIGRTREESTLNLTFLA HHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHH FLCLACLIAAVGVVTDSPVTIVGAMVVGPEFGPLAALAVSIVRRKWSLARRSLLALLVGF HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVAMGVTAVGALAAEAAGWVTLKSVRELQQVDFVFQVGPFSLVVALLAGAAGMLSLMSAK HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH SAALVGVFISVTTVPAAGFAVVAATVGEWDIAGLSALQLAVNLFGIVLAGVLVLWVRPRG HHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC YR CC >Mature Secondary Structure MLHLRVIAPAEVSDQVVEFLSTTTGVTHIVRVPQAAISPAGDLITADVARETANDVLDGL CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHH KSIDIDKRGSITAEVLDTVISQTAYEAEDDAEGDPADAVIWDELIGRTREESTLNLTFLA HHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHH FLCLACLIAAVGVVTDSPVTIVGAMVVGPEFGPLAALAVSIVRRKWSLARRSLLALLVGF HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVAMGVTAVGALAAEAAGWVTLKSVRELQQVDFVFQVGPFSLVVALLAGAAGMLSLMSAK HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH SAALVGVFISVTTVPAAGFAVVAATVGEWDIAGLSALQLAVNLFGIVLAGVLVLWVRPRG HHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC YR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA