| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629928
Identifier: 169629928
GI number: 169629928
Start: 2893423
End: 2893863
Strand: Reverse
Name: 169629928
Synonym: MAB_2844c
Alternate gene names: NA
Gene position: 2893863-2893423 (Counterclockwise)
Preceding gene: 169629931
Following gene: 169629927
Centisome position: 57.11
GC content: 70.52
Gene sequence:
>441_bases ATGATTTATGGGGCGGGGGTGGCGGTGCTGTGCTGGATGACGGCACTGTCCTATTTCGACATCAGATACCGCCGGTTGCC GAACTGGCTGACGCTGCCCGCCGCGGTGGTGATCATCACGGTGGGCCTGTGGGGGCGCGGGCCCTCGATATGGGCGGGAG CGGCGGCTCTGACGGCGCTGTATCTGGCCGCCCACCTGCTGTCACCGCGCGCGATGGGTGCCGGAGACGTCAAGCTTGCG GTCAGCACCGGGGGCTTGGCGGGGGCGTTCGGGCTGGACGCGTGGTTCCTGGCGGCGATCGGTGCACCGCTGGTGACGGG GCTGACCGGCCTGGTGCTCCTGGGATTGGGACGCCGGGGAGCGACGGTTCCGCACGGGCCGTCGATGTGCCTGGCTACGG CGGTGGCGGCCGGGCTGGGCGCCACGACACCGGGTATCTGA
Upstream 100 bases:
>100_bases GCGCTCATCACCGAAACGGCTGTACTCCTGCGGGCTCCACTGGGTTTTCGGTGTCCTGGTCACTGTTCCAAACCTAGCCC CGCGGAGTTAGATTCCCCAC
Downstream 100 bases:
>100_bases CAAAGAAGCATCCACTGCGCCGATCGATTTGGAGGACCGACCTGCCCGCATGGGACAATGGAAGACGTGTTGCGCTGGAT CACGGCAGGTGAATCGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MIYGAGVAVLCWMTALSYFDIRYRRLPNWLTLPAAVVIITVGLWGRGPSIWAGAAALTALYLAAHLLSPRAMGAGDVKLA VSTGGLAGAFGLDAWFLAAIGAPLVTGLTGLVLLGLGRRGATVPHGPSMCLATAVAAGLGATTPGI
Sequences:
>Translated_146_residues MIYGAGVAVLCWMTALSYFDIRYRRLPNWLTLPAAVVIITVGLWGRGPSIWAGAAALTALYLAAHLLSPRAMGAGDVKLA VSTGGLAGAFGLDAWFLAAIGAPLVTGLTGLVLLGLGRRGATVPHGPSMCLATAVAAGLGATTPGI >Mature_146_residues MIYGAGVAVLCWMTALSYFDIRYRRLPNWLTLPAAVVIITVGLWGRGPSIWAGAAALTALYLAAHLLSPRAMGAGDVKLA VSTGGLAGAFGLDAWFLAAIGAPLVTGLTGLVLLGLGRRGATVPHGPSMCLATAVAAGLGATTPGI
Specific function: Unknown
COG id: COG1989
COG function: function code NOU; Type II secretory pathway, prepilin signal peptidase PulO and related peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14714; Mature: 14714
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYGAGVAVLCWMTALSYFDIRYRRLPNWLTLPAAVVIITVGLWGRGPSIWAGAAALTAL CEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH YLAAHLLSPRAMGAGDVKLAVSTGGLAGAFGLDAWFLAAIGAPLVTGLTGLVLLGLGRRG HHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ATVPHGPSMCLATAVAAGLGATTPGI CCCCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MIYGAGVAVLCWMTALSYFDIRYRRLPNWLTLPAAVVIITVGLWGRGPSIWAGAAALTAL CEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH YLAAHLLSPRAMGAGDVKLAVSTGGLAGAFGLDAWFLAAIGAPLVTGLTGLVLLGLGRRG HHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ATVPHGPSMCLATAVAAGLGATTPGI CCCCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA