| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is ampH [C]
Identifier: 169629917
GI number: 169629917
Start: 2884702
End: 2885922
Strand: Direct
Name: ampH [C]
Synonym: MAB_2833
Alternate gene names: 169629917
Gene position: 2884702-2885922 (Clockwise)
Preceding gene: 169629909
Following gene: 169629919
Centisome position: 56.93
GC content: 66.83
Gene sequence:
>1221_bases ATGGCCGAACCCGATTCCACCTTCGATGCCGCCCTCGCCCCGATCCGCGCCGCGATCGACGACCGCATCTTGGCCGGGGC GGTGACCCTGGTGTGGCAGGGCGGACAGCTCAGACATCTGGGCGCCACCGGCTATCGCGATATCGACGCGGGACTCTCGA TGGCCGAGAACACCATTTTCCGCATCGCCTCCATGACAAAACCCATCATCAGCGCCGCCACCATGAATCTGGTCGACGAC GGCACGATTCGCCTGAGCGACCCGATCACCACCTGGCTACCGGAGTTCAGCGACATGCGGGTGCTCAAGAACCCGGAGGG CCCACTGGATGACACATTCCGGGCGCCGCGGCTCATCACAGTGGAGGACCTGCTGACCCACCGCAGCGGGCTGACCTACG ACTTCATTTCCACCGGCCCGATTGCCAAGGCCTATCACCCTCTGCACACCGCGGCGTTCCGCGAGCCCGATGAGTGGCTG GCGGCGATCGCTGCGCTACCACTGGTGTACCCACCCGGCGAGCGCTTCCACTACAGCCATTCCACCGATGTGTTGGGCTT GCTCATCGCCCGTGCGGCCGGTTTGCCGCTGAACACGCTCTTGCGTCAACGGATCCTGGATCCACTCGGCATGAATGACA CCGATTTCTTCGTTCCCGAGCACAAGGCGGCACGCCTGGCACGCCTGTACGGCCTGGGCGATGACGACACGATCGTGGCA GCCGACAGCGGTTACCTCACCGCGATGCCCACCTCAGCACCCGCGCTGTGCCGCGGCGGCGGCGCTCTGGCCAGCACCGC GCACGACTACCTCACCTTCGCACGCGCGCTGCTAGGCGGCGGCCAGGCCGACGGGGTGCGCATCCTGTCCCCCGAGTCGA CCCAGGCGCTGCGCACCAACAGGCTCACCCCTGCTCAGCGTCGGCTTCCGTCGTTCGGGATTCCCTACTGGACCGGACGC GGCTTCGGCCTCGGCTTGTCGGTCGTCATGGATCCCAACGAGGCCGCGCTGTTCGGGCCTGGCGGCACGGGCACCTTCGG CTGGCCAGGAGCTTTCGGCACCTGGTGGCACGCCGACCCGAAGGCCGATGCGATCCTCATGTTCCTGCCGCAATGGCGCA TGCCCGAGCTGGACCCGAAGGCCGCCCTGGCCCGCACGTCGACGATCAGGCTGCAGCTGCTACACGTCCAATTCGGACAG GCGGTGTACGCAGCGCTGTGA
Upstream 100 bases:
>100_bases TCCTTCTCCGCCTCACTGGACGGATCGTTAAAGGATGTCACTTATCGCCAGGGAGCTTAGCATCCGGGCACCCGCCAGCC TCCGCTGACAGTATGGAGAG
Downstream 100 bases:
>100_bases CCGCCGCGCGTCAGTCCCGGTGCGCCTGGAGCAACCAGCCCGCCATCGAGACCCAACCGTTGGATTCCTCACGGAATTCT GCGAAACGCTGCGCGCCGCC
Product: beta-lactamase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MAEPDSTFDAALAPIRAAIDDRILAGAVTLVWQGGQLRHLGATGYRDIDAGLSMAENTIFRIASMTKPIISAATMNLVDD GTIRLSDPITTWLPEFSDMRVLKNPEGPLDDTFRAPRLITVEDLLTHRSGLTYDFISTGPIAKAYHPLHTAAFREPDEWL AAIAALPLVYPPGERFHYSHSTDVLGLLIARAAGLPLNTLLRQRILDPLGMNDTDFFVPEHKAARLARLYGLGDDDTIVA ADSGYLTAMPTSAPALCRGGGALASTAHDYLTFARALLGGGQADGVRILSPESTQALRTNRLTPAQRRLPSFGIPYWTGR GFGLGLSVVMDPNEAALFGPGGTGTFGWPGAFGTWWHADPKADAILMFLPQWRMPELDPKAALARTSTIRLQLLHVQFGQ AVYAAL
Sequences:
>Translated_406_residues MAEPDSTFDAALAPIRAAIDDRILAGAVTLVWQGGQLRHLGATGYRDIDAGLSMAENTIFRIASMTKPIISAATMNLVDD GTIRLSDPITTWLPEFSDMRVLKNPEGPLDDTFRAPRLITVEDLLTHRSGLTYDFISTGPIAKAYHPLHTAAFREPDEWL AAIAALPLVYPPGERFHYSHSTDVLGLLIARAAGLPLNTLLRQRILDPLGMNDTDFFVPEHKAARLARLYGLGDDDTIVA ADSGYLTAMPTSAPALCRGGGALASTAHDYLTFARALLGGGQADGVRILSPESTQALRTNRLTPAQRRLPSFGIPYWTGR GFGLGLSVVMDPNEAALFGPGGTGTFGWPGAFGTWWHADPKADAILMFLPQWRMPELDPKAALARTSTIRLQLLHVQFGQ AVYAAL >Mature_405_residues AEPDSTFDAALAPIRAAIDDRILAGAVTLVWQGGQLRHLGATGYRDIDAGLSMAENTIFRIASMTKPIISAATMNLVDDG TIRLSDPITTWLPEFSDMRVLKNPEGPLDDTFRAPRLITVEDLLTHRSGLTYDFISTGPIAKAYHPLHTAAFREPDEWLA AIAALPLVYPPGERFHYSHSTDVLGLLIARAAGLPLNTLLRQRILDPLGMNDTDFFVPEHKAARLARLYGLGDDDTIVAA DSGYLTAMPTSAPALCRGGGALASTAHDYLTFARALLGGGQADGVRILSPESTQALRTNRLTPAQRRLPSFGIPYWTGRG FGLGLSVVMDPNEAALFGPGGTGTFGWPGAFGTWWHADPKADAILMFLPQWRMPELDPKAALARTSTIRLQLLHVQFGQA VYAAL
Specific function: Binds Penicillin And Contributes To The Normal Morphology Of Escherichia Coli. [C]
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786574, Length=315, Percent_Identity=26.3492063492064, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: NA
Molecular weight: Translated: 43852; Mature: 43720
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEPDSTFDAALAPIRAAIDDRILAGAVTLVWQGGQLRHLGATGYRDIDAGLSMAENTIF CCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHH RIASMTKPIISAATMNLVDDGTIRLSDPITTWLPEFSDMRVLKNPEGPLDDTFRAPRLIT HHHHHHHHHHHHHHHHEECCCEEEECCCHHHHCCCCCCCEEECCCCCCCCCHHCCCEEEE VEDLLTHRSGLTYDFISTGPIAKAYHPLHTAAFREPDEWLAAIAALPLVYPPGERFHYSH HHHHHHHCCCCEEEEECCCCCHHHHCHHHHHHCCCHHHHHHHHHHHCEECCCCCCEECCC STDVLGLLIARAAGLPLNTLLRQRILDPLGMNDTDFFVPEHKAARLARLYGLGDDDTIVA CHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHCCCCCCEEEE ADSGYLTAMPTSAPALCRGGGALASTAHDYLTFARALLGGGQADGVRILSPESTQALRTN ECCCEEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHC RLTPAQRRLPSFGIPYWTGRGFGLGLSVVMDPNEAALFGPGGTGTFGWPGAFGTWWHADP CCCHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCC KADAILMFLPQWRMPELDPKAALARTSTIRLQLLHVQFGQAVYAAL CCCEEEEECCCCCCCCCCHHHHHHHCCEEEEEEEEEHHCCHHHHCC >Mature Secondary Structure AEPDSTFDAALAPIRAAIDDRILAGAVTLVWQGGQLRHLGATGYRDIDAGLSMAENTIF CCCCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHH RIASMTKPIISAATMNLVDDGTIRLSDPITTWLPEFSDMRVLKNPEGPLDDTFRAPRLIT HHHHHHHHHHHHHHHHEECCCEEEECCCHHHHCCCCCCCEEECCCCCCCCCHHCCCEEEE VEDLLTHRSGLTYDFISTGPIAKAYHPLHTAAFREPDEWLAAIAALPLVYPPGERFHYSH HHHHHHHCCCCEEEEECCCCCHHHHCHHHHHHCCCHHHHHHHHHHHCEECCCCCCEECCC STDVLGLLIARAAGLPLNTLLRQRILDPLGMNDTDFFVPEHKAARLARLYGLGDDDTIVA CHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHCCCCCCEEEE ADSGYLTAMPTSAPALCRGGGALASTAHDYLTFARALLGGGQADGVRILSPESTQALRTN ECCCEEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHC RLTPAQRRLPSFGIPYWTGRGFGLGLSVVMDPNEAALFGPGGTGTFGWPGAFGTWWHADP CCCHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCC KADAILMFLPQWRMPELDPKAALARTSTIRLQLLHVQFGQAVYAAL CCCEEEEECCCCCCCCCCHHHHHHHCCEEEEEEEEEHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]