| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629909
Identifier: 169629909
GI number: 169629909
Start: 2874421
End: 2875737
Strand: Direct
Name: 169629909
Synonym: MAB_2825
Alternate gene names: NA
Gene position: 2874421-2875737 (Clockwise)
Preceding gene: 169629903
Following gene: 169629917
Centisome position: 56.73
GC content: 63.25
Gene sequence:
>1317_bases ATGGGTGACCACGAGCACCCATCACGTGAGCGTGATCGGGTACTAGATGCCGTGAGGCTGATGTCACTGGCCACCGTGGT GGCCTACCACGTCCTTGCCGGCAGCCCCACCCTCGTCAAGGGCAAACCCGCGATGGCATCGAATTACAACGTACATTGGC TATTTTGGCTGGTACCGCTCATGCCGCTGTTTTTCTTTGCCGGTGCCGCCGCAAACGTACACTCCTGGGAGTCCGGCAAA TCCTGGGGGCAGTTTCTGATGGGCCGGGCAACGCGGCTCTTTCGCCCCGTGTTCTATTTTTTGGCCGTCGTCGCGCTGAT CACCACCTTGCTGCGCATCACGATGGGCAACTCACCACAACTGCTATACCTCGAGATGCGCCATATTGAACTGCTCTGGT ACGTGGGGGCCTACCTGTTGACGCTGGCCTTCATGCCGTGTCTGGCGCGCATCCGCACCGCGCACCAACTCGGCTGGTTC ATCGCGGCAATGTGCCTGCTCACCGCCCTCACGGACACCGTCAGTCTGATCACTGACACGTGGCTGACGACGGGCTGGAT CAACATGATCTTCATGTGGCTGATCCCCGCGGCCCTCGGCATCGGCTATCAGCGCCGGCTCGTCCCCCGCCCGGTGGCGT TGACCCTCGCGAGTGTCGCATTGGCCGCGACCGTGGCACTTGCCGTCCTCGGTCCGTATCCGTCGGGCCTGATCGCCAAC ATGCCGCCGACCCTGCTGCTCGCCGCAAGCTCGATCGTGGAATGCCTCGCGGTGATCGCGTTCGCACCCATCATCAATCG CTGGGTCCAGGGCGCCAGGACCTGGCGTTTCTTCGAACTGTGCAACAGCGGCAGCATGACGATCTACCTGTGGCACTGGG TTGTCACATTTCTGCTGTCCTACGGGGTCTATTTGACCTTCCGTATCGGGCTGCTGAGCCAGCATGACGCGTGGTACTGG CCGGCAAACGTGCTGCGGCTGCTCATCGTGTGCGCCGTCGTGGCGGTGTTCTTCGTCCCGCTGCGGGCCACCGAGCGACG GCCATTGCCCTGGTGGGATCGCCCGGTGCCGGCGATGAACACGGGGCGCGATATCGCGGTCGGTGTCCTGGTACTGGTCG GCGCGATACTGACGCTGGTCTACACCCGGATCTACGTCATCGATCCGCACTGGGGCGGATTCACGCCGATCGGACGATGG ATCGTGGTGGCTTCTCTGGTGCCGCTGGCCGCCGCACGCTTCCTGTGCCGAAACCCCTTGTCCCCCACTGCCGGTCAGGT AATGGACGGACGGCCGCTGGCGCACTCGGCCAGATAG
Upstream 100 bases:
>100_bases GTCAACCTTCAGTTGAAGAGACGCAGGTGAGGGCACCACTCGCGGAGCGCCCGTGCGGCCGCTCAGCGCAGCGCATCAGT TGCTGGGTAGGGTGCCAAAT
Downstream 100 bases:
>100_bases ACACCCGCGGACCCGAGTGTGCGGATTGTGTCGATTTTCGGTCGGTTATCGACCGGATTCGCACTCTCGACCGGCGCCAG ACTCAGTCGAGTAGATAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MGDHEHPSRERDRVLDAVRLMSLATVVAYHVLAGSPTLVKGKPAMASNYNVHWLFWLVPLMPLFFFAGAAANVHSWESGK SWGQFLMGRATRLFRPVFYFLAVVALITTLLRITMGNSPQLLYLEMRHIELLWYVGAYLLTLAFMPCLARIRTAHQLGWF IAAMCLLTALTDTVSLITDTWLTTGWINMIFMWLIPAALGIGYQRRLVPRPVALTLASVALAATVALAVLGPYPSGLIAN MPPTLLLAASSIVECLAVIAFAPIINRWVQGARTWRFFELCNSGSMTIYLWHWVVTFLLSYGVYLTFRIGLLSQHDAWYW PANVLRLLIVCAVVAVFFVPLRATERRPLPWWDRPVPAMNTGRDIAVGVLVLVGAILTLVYTRIYVIDPHWGGFTPIGRW IVVASLVPLAAARFLCRNPLSPTAGQVMDGRPLAHSAR
Sequences:
>Translated_438_residues MGDHEHPSRERDRVLDAVRLMSLATVVAYHVLAGSPTLVKGKPAMASNYNVHWLFWLVPLMPLFFFAGAAANVHSWESGK SWGQFLMGRATRLFRPVFYFLAVVALITTLLRITMGNSPQLLYLEMRHIELLWYVGAYLLTLAFMPCLARIRTAHQLGWF IAAMCLLTALTDTVSLITDTWLTTGWINMIFMWLIPAALGIGYQRRLVPRPVALTLASVALAATVALAVLGPYPSGLIAN MPPTLLLAASSIVECLAVIAFAPIINRWVQGARTWRFFELCNSGSMTIYLWHWVVTFLLSYGVYLTFRIGLLSQHDAWYW PANVLRLLIVCAVVAVFFVPLRATERRPLPWWDRPVPAMNTGRDIAVGVLVLVGAILTLVYTRIYVIDPHWGGFTPIGRW IVVASLVPLAAARFLCRNPLSPTAGQVMDGRPLAHSAR >Mature_437_residues GDHEHPSRERDRVLDAVRLMSLATVVAYHVLAGSPTLVKGKPAMASNYNVHWLFWLVPLMPLFFFAGAAANVHSWESGKS WGQFLMGRATRLFRPVFYFLAVVALITTLLRITMGNSPQLLYLEMRHIELLWYVGAYLLTLAFMPCLARIRTAHQLGWFI AAMCLLTALTDTVSLITDTWLTTGWINMIFMWLIPAALGIGYQRRLVPRPVALTLASVALAATVALAVLGPYPSGLIANM PPTLLLAASSIVECLAVIAFAPIINRWVQGARTWRFFELCNSGSMTIYLWHWVVTFLLSYGVYLTFRIGLLSQHDAWYWP ANVLRLLIVCAVVAVFFVPLRATERRPLPWWDRPVPAMNTGRDIAVGVLVLVGAILTLVYTRIYVIDPHWGGFTPIGRWI VVASLVPLAAARFLCRNPLSPTAGQVMDGRPLAHSAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48865; Mature: 48734
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDHEHPSRERDRVLDAVRLMSLATVVAYHVLAGSPTLVKGKPAMASNYNVHWLFWLVPL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHH MPLFFFAGAAANVHSWESGKSWGQFLMGRATRLFRPVFYFLAVVALITTLLRITMGNSPQ HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LLYLEMRHIELLWYVGAYLLTLAFMPCLARIRTAHQLGWFIAAMCLLTALTDTVSLITDT EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLTTGWINMIFMWLIPAALGIGYQRRLVPRPVALTLASVALAATVALAVLGPYPSGLIAN HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC MPPTLLLAASSIVECLAVIAFAPIINRWVQGARTWRFFELCNSGSMTIYLWHWVVTFLLS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHH YGVYLTFRIGLLSQHDAWYWPANVLRLLIVCAVVAVFFVPLRATERRPLPWWDRPVPAMN HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC TGRDIAVGVLVLVGAILTLVYTRIYVIDPHWGGFTPIGRWIVVASLVPLAAARFLCRNPL CCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC SPTAGQVMDGRPLAHSAR CCCCCCCCCCCCCCCCCC >Mature Secondary Structure GDHEHPSRERDRVLDAVRLMSLATVVAYHVLAGSPTLVKGKPAMASNYNVHWLFWLVPL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHH MPLFFFAGAAANVHSWESGKSWGQFLMGRATRLFRPVFYFLAVVALITTLLRITMGNSPQ HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LLYLEMRHIELLWYVGAYLLTLAFMPCLARIRTAHQLGWFIAAMCLLTALTDTVSLITDT EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLTTGWINMIFMWLIPAALGIGYQRRLVPRPVALTLASVALAATVALAVLGPYPSGLIAN HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC MPPTLLLAASSIVECLAVIAFAPIINRWVQGARTWRFFELCNSGSMTIYLWHWVVTFLLS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHH YGVYLTFRIGLLSQHDAWYWPANVLRLLIVCAVVAVFFVPLRATERRPLPWWDRPVPAMN HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC TGRDIAVGVLVLVGAILTLVYTRIYVIDPHWGGFTPIGRWIVVASLVPLAAARFLCRNPL CCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC SPTAGQVMDGRPLAHSAR CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA