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The map label for this gene is ypfJ [C]

Identifier: 169629859

GI number: 169629859

Start: 2821219

End: 2822367

Strand: Reverse

Name: ypfJ [C]

Synonym: MAB_2775c

Alternate gene names: 169629859

Gene position: 2822367-2821219 (Counterclockwise)

Preceding gene: 169629861

Following gene: 169629858

Centisome position: 55.7

GC content: 65.27

Gene sequence:

>1149_bases
ATGGAGCCGCGACCGTATTTCCAGCCCAGACCGGTGCCTGCCTGGGGCGCGCCGCTGCCGCCGCCTGCTCACGCCCCCAT
GGCACCACCGCAACGTGGATGGCACCCACCACCTATTACGCCGTTTCCGGGATATCAGGCGCCTCAGCCGCTGCCCGCGT
ACCGGGTACCGCCGGGGCGCCCGGTATATCCACCGCCAGTCGGGTACGGACCGCGCCCGCGGGCGCGCGGCAGATCTCAC
ACCGGCCTGATCATCGGCGGCGCGTCCTTCGTGCTGGTCGCGATCCTGATGCTGGGAACGGTGGTGGTGTGGTCGGTCCA
TCAGGACTCCGGCGGGCGCCACCCGGTGCGGGTGACCTCGACATGGCAGTATTCTCCGACCTCGACCTGGATCAGCCCTA
AGGTGACACCCCCGCAGCCACCGCCCGGCCCTCAGCCGGTCTACGCGCTCGGCGACAACCCTTTGTTCCGGGACCGGGAG
GCTGGGTTCACCAATGCGCCCTGCTCAACGAGCACATGGCCGTTTGACATTCCTCACGCAGAGGCGTTCTACCGGGATCT
GCTCGGGTGCTTGGATCCGGAGTGGAAGCGGCTTCTGGACGGGTTGCGTCTGCCATGGTCGTCGCCGGGATTGGTAGTGG
CCGGAAGCTACGTGGATTCGCCCTGCGGGGGCGAGGACTTCAGCGGCGGCGAGACAGCCGCCTTCTACTGCTCGGCCAAC
AACACGATCTACATGTCGACGGTGAGCATGTCGCCCAACAGGTACGGAAATCATGACGGCTTCTACCTTGCCGTGTATGC
GCACGAGTACGGACATCATGTCCAGGAGCTCAGCGGCATATCGTCGGAGGAATGGAACCAGCGCGTCGCTGCGGGAGTCG
ATTCCCCGGTGGGGCTGGAGCTGTCGCGGCGAAGCGAACTTCAGGCCCAGTGCTTCTCGGGAATGTTCCTCGGGTCGCGG
CGCGGGGGCACGATCACCCAGCACGAACTCGATCTTGCCTGGAACGACCAATATCGGGGCGATGGGCAACGGTCCAAGCG
TGACCATGGGTCCAACGAGCATTCTGCGGCATGGTGGCGGCACGGCTCGCTCAAGAATCGGCTGTGGGAATGCAATACCT
GGCTGTCCGACAGTTCAGAAGTGAGCTGA

Upstream 100 bases:

>100_bases
AACCGTAAAGCCACCCCACGACTCATCTCTCCCACGGCGGTAACCCTAGGTCAGGGTCGATATGCTGGCGCGCATTCACA
GAATGTGGTGGGGGGACTGC

Downstream 100 bases:

>100_bases
CCGGCGTCCCTGCGCAGGTCGCCGGAAGGGAGCCGGTAGGCTGGCCGCATGGAATTGGCGTTGCAGATCGTCCTGGTGAT
CACGAGCTTGTTGGTGGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MEPRPYFQPRPVPAWGAPLPPPAHAPMAPPQRGWHPPPITPFPGYQAPQPLPAYRVPPGRPVYPPPVGYGPRPRARGRSH
TGLIIGGASFVLVAILMLGTVVVWSVHQDSGGRHPVRVTSTWQYSPTSTWISPKVTPPQPPPGPQPVYALGDNPLFRDRE
AGFTNAPCSTSTWPFDIPHAEAFYRDLLGCLDPEWKRLLDGLRLPWSSPGLVVAGSYVDSPCGGEDFSGGETAAFYCSAN
NTIYMSTVSMSPNRYGNHDGFYLAVYAHEYGHHVQELSGISSEEWNQRVAAGVDSPVGLELSRRSELQAQCFSGMFLGSR
RGGTITQHELDLAWNDQYRGDGQRSKRDHGSNEHSAAWWRHGSLKNRLWECNTWLSDSSEVS

Sequences:

>Translated_382_residues
MEPRPYFQPRPVPAWGAPLPPPAHAPMAPPQRGWHPPPITPFPGYQAPQPLPAYRVPPGRPVYPPPVGYGPRPRARGRSH
TGLIIGGASFVLVAILMLGTVVVWSVHQDSGGRHPVRVTSTWQYSPTSTWISPKVTPPQPPPGPQPVYALGDNPLFRDRE
AGFTNAPCSTSTWPFDIPHAEAFYRDLLGCLDPEWKRLLDGLRLPWSSPGLVVAGSYVDSPCGGEDFSGGETAAFYCSAN
NTIYMSTVSMSPNRYGNHDGFYLAVYAHEYGHHVQELSGISSEEWNQRVAAGVDSPVGLELSRRSELQAQCFSGMFLGSR
RGGTITQHELDLAWNDQYRGDGQRSKRDHGSNEHSAAWWRHGSLKNRLWECNTWLSDSSEVS
>Mature_382_residues
MEPRPYFQPRPVPAWGAPLPPPAHAPMAPPQRGWHPPPITPFPGYQAPQPLPAYRVPPGRPVYPPPVGYGPRPRARGRSH
TGLIIGGASFVLVAILMLGTVVVWSVHQDSGGRHPVRVTSTWQYSPTSTWISPKVTPPQPPPGPQPVYALGDNPLFRDRE
AGFTNAPCSTSTWPFDIPHAEAFYRDLLGCLDPEWKRLLDGLRLPWSSPGLVVAGSYVDSPCGGEDFSGGETAAFYCSAN
NTIYMSTVSMSPNRYGNHDGFYLAVYAHEYGHHVQELSGISSEEWNQRVAAGVDSPVGLELSRRSELQAQCFSGMFLGSR
RGGTITQHELDLAWNDQYRGDGQRSKRDHGSNEHSAAWWRHGSLKNRLWECNTWLSDSSEVS

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=212, Percent_Identity=27.8301886792453, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42110; Mature: 42110

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPRPYFQPRPVPAWGAPLPPPAHAPMAPPQRGWHPPPITPFPGYQAPQPLPAYRVPPGR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC
PVYPPPVGYGPRPRARGRSHTGLIIGGASFVLVAILMLGTVVVWSVHQDSGGRHPVRVTS
CCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEE
TWQYSPTSTWISPKVTPPQPPPGPQPVYALGDNPLFRDREAGFTNAPCSTSTWPFDIPHA
EEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
EAFYRDLLGCLDPEWKRLLDGLRLPWSSPGLVVAGSYVDSPCGGEDFSGGETAAFYCSAN
HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEECC
NTIYMSTVSMSPNRYGNHDGFYLAVYAHEYGHHVQELSGISSEEWNQRVAAGVDSPVGLE
CEEEEEEEECCCCCCCCCCCEEEEEEEEHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCE
LSRRSELQAQCFSGMFLGSRRGGTITQHELDLAWNDQYRGDGQRSKRDHGSNEHSAAWWR
EHHHHHHHHHHHHCEEEECCCCCCEEEEEEEEEECCCCCCCCCHHHHCCCCCCCCHHEEE
HGSLKNRLWECNTWLSDSSEVS
CCCHHHHHEECCCCCCCCCCCC
>Mature Secondary Structure
MEPRPYFQPRPVPAWGAPLPPPAHAPMAPPQRGWHPPPITPFPGYQAPQPLPAYRVPPGR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC
PVYPPPVGYGPRPRARGRSHTGLIIGGASFVLVAILMLGTVVVWSVHQDSGGRHPVRVTS
CCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEE
TWQYSPTSTWISPKVTPPQPPPGPQPVYALGDNPLFRDREAGFTNAPCSTSTWPFDIPHA
EEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
EAFYRDLLGCLDPEWKRLLDGLRLPWSSPGLVVAGSYVDSPCGGEDFSGGETAAFYCSAN
HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEECC
NTIYMSTVSMSPNRYGNHDGFYLAVYAHEYGHHVQELSGISSEEWNQRVAAGVDSPVGLE
CEEEEEEEECCCCCCCCCCCEEEEEEEEHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCE
LSRRSELQAQCFSGMFLGSRRGGTITQHELDLAWNDQYRGDGQRSKRDHGSNEHSAAWWR
EHHHHHHHHHHHHCEEEECCCCCCEEEEEEEEEECCCCCCCCCHHHHCCCCCCCCHHEEE
HGSLKNRLWECNTWLSDSSEVS
CCCHHHHHEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA