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The map label for this gene is sufD [C]

Identifier: 169629832

GI number: 169629832

Start: 2794485

End: 2795681

Strand: Reverse

Name: sufD [C]

Synonym: MAB_2748c

Alternate gene names: 169629832

Gene position: 2795681-2794485 (Counterclockwise)

Preceding gene: 169629833

Following gene: 169629831

Centisome position: 55.17

GC content: 65.83

Gene sequence:

>1197_bases
ATGTCGAATCTCACTGATTCCACCCCGGGTGGATCGAATCTCGCTGGGGCCGTAGAGGGTACGGGCATCAACAAGGGCGA
GCTGTTCAGCTCGTACGATGTCGACGCCTTCGAGGTGCCCGGCGGTCGCGACGAGTTGTGGCGGTTCACCCCGCTGCGGC
GCCTGCGCGGCCTGCACGACGGGACCGCGGTGGCGACGGCGGCGGCTCCCGTGGCCGTGAACGCGTCCGGCGGTGTGACG
GTCGAAACCGTCGAGCGCTCCGATGACAGGTTGGGCCAGGGCGGTATCCCGTCGGATCGTGTCGCGGCACAGGCGTATTC
GTCGTTCTCGACGGCGACCGTGGTTTCTGTCGGCAAGCAGCAAGTCGTCGCCGACCCGATCGAAATCAGCCTCAGCGGGC
CCGGCCAGGGGCAGGTCGCGTACGGCCACACGCAGGTTCGCGCCGGTGCATTGTCCGAGTCGGCCGTGGTGATCGACTAT
CGCGGCAGCGGAACGTACGCCGAGAATGTCGAGTTTGTATTGGACGACGCCGCGCGCCTGACGGTGGTCTCCATTGCCGA
CTGGGCCGACGACGCCGTCCACGTGACAACCCACCACGCCAAACTCGGCAAGGACGCCGTGCTTCGGCATATCGCGGTCA
CCTTGGGGGGAGATGTGGTGAGGCTGACGGGCACCGTCCGTTTCGGTGCGCCGGGCGGCGATGCCGAACTGCTGGGCTTG
TACTACGCGGATGAGGGGCAGTTCTTCGAGCACCGGCTCCTGGTCGACCATGCCCAGCCGAACTGCAAGTCGAATGTTGT
GTACAAGGGAGCCCTACAGGGAGATCCGTCCTCGGATAAGCCCGACGCGCACACCGTCTGGATCGGCGACGTGCTCATCC
GCGCCGAGGCCACCGGAACCGACACCTTTGAGCTGAACCGCAACCTGATCCTCACCGACGGGGCGCGGGCGGACTCGGTG
CCTAACCTGGAGATTGAGACCGGGGAGATCGCCGGGGCCGGACATGCCAGTGCCACCGGCCGATTCGATGACGAGCAGCT
GTTCTACCTGCGCTCGCGCGGAATTCCCGAAGAAGACGCCCGCCGCCTGGTGGTGCGTGGCTTCTTCCAGGACATCATCG
GCCGCATCGGGATCGAGTCGGTGCGAGACCGCCTCACCGAGGCCATCGAACAAGAACTGCAAGCGAACGCGAACTAA

Upstream 100 bases:

>100_bases
CGGGTTCGTCGAACCCATCGCCAAGGAATTGCCCATGGAGTACGCGCTCGAGCTCAACCGCCTCATCGAGCTGCAAATGG
AAGGCGCGGTCGGTTAACGC

Downstream 100 bases:

>100_bases
GTCGAACTCGTAGATAGAAAGCAACTCATGACCACGCTAGAAATCAAGGATCTGCACGTCAGCATCTCGCCCAAGGAGGG
CGAGTCGATCGAGATCCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MSNLTDSTPGGSNLAGAVEGTGINKGELFSSYDVDAFEVPGGRDELWRFTPLRRLRGLHDGTAVATAAAPVAVNASGGVT
VETVERSDDRLGQGGIPSDRVAAQAYSSFSTATVVSVGKQQVVADPIEISLSGPGQGQVAYGHTQVRAGALSESAVVIDY
RGSGTYAENVEFVLDDAARLTVVSIADWADDAVHVTTHHAKLGKDAVLRHIAVTLGGDVVRLTGTVRFGAPGGDAELLGL
YYADEGQFFEHRLLVDHAQPNCKSNVVYKGALQGDPSSDKPDAHTVWIGDVLIRAEATGTDTFELNRNLILTDGARADSV
PNLEIETGEIAGAGHASATGRFDDEQLFYLRSRGIPEEDARRLVVRGFFQDIIGRIGIESVRDRLTEAIEQELQANAN

Sequences:

>Translated_398_residues
MSNLTDSTPGGSNLAGAVEGTGINKGELFSSYDVDAFEVPGGRDELWRFTPLRRLRGLHDGTAVATAAAPVAVNASGGVT
VETVERSDDRLGQGGIPSDRVAAQAYSSFSTATVVSVGKQQVVADPIEISLSGPGQGQVAYGHTQVRAGALSESAVVIDY
RGSGTYAENVEFVLDDAARLTVVSIADWADDAVHVTTHHAKLGKDAVLRHIAVTLGGDVVRLTGTVRFGAPGGDAELLGL
YYADEGQFFEHRLLVDHAQPNCKSNVVYKGALQGDPSSDKPDAHTVWIGDVLIRAEATGTDTFELNRNLILTDGARADSV
PNLEIETGEIAGAGHASATGRFDDEQLFYLRSRGIPEEDARRLVVRGFFQDIIGRIGIESVRDRLTEAIEQELQANAN
>Mature_397_residues
SNLTDSTPGGSNLAGAVEGTGINKGELFSSYDVDAFEVPGGRDELWRFTPLRRLRGLHDGTAVATAAAPVAVNASGGVTV
ETVERSDDRLGQGGIPSDRVAAQAYSSFSTATVVSVGKQQVVADPIEISLSGPGQGQVAYGHTQVRAGALSESAVVIDYR
GSGTYAENVEFVLDDAARLTVVSIADWADDAVHVTTHHAKLGKDAVLRHIAVTLGGDVVRLTGTVRFGAPGGDAELLGLY
YADEGQFFEHRLLVDHAQPNCKSNVVYKGALQGDPSSDKPDAHTVWIGDVLIRAEATGTDTFELNRNLILTDGARADSVP
NLEIETGEIAGAGHASATGRFDDEQLFYLRSRGIPEEDARRLVVRGFFQDIIGRIGIESVRDRLTEAIEQELQANAN

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=408, Percent_Identity=24.2647058823529, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 42182; Mature: 42051

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLTDSTPGGSNLAGAVEGTGINKGELFSSYDVDAFEVPGGRDELWRFTPLRRLRGLHD
CCCCCCCCCCCCCCCCEEECCCCCCCCEECCCCCCEEECCCCHHHHHEECHHHHHCCCCC
GTAVATAAAPVAVNASGGVTVETVERSDDRLGQGGIPSDRVAAQAYSSFSTATVVSVGKQ
CCEEEEECCCEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCH
QVVADPIEISLSGPGQGQVAYGHTQVRAGALSESAVVIDYRGSGTYAENVEFVLDDAARL
HEECCCEEEEECCCCCCCEEECCCEEEECCCCCCEEEEEECCCCCCCCCCEEEECCCCEE
TVVSIADWADDAVHVTTHHAKLGKDAVLRHIAVTLGGDVVRLTGTVRFGAPGGDAELLGL
EEEEEECCCCCEEEEEECHHHCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEEEE
YYADEGQFFEHRLLVDHAQPNCKSNVVYKGALQGDPSSDKPDAHTVWIGDVLIRAEATGT
EEECCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEEEECCCC
DTFELNRNLILTDGARADSVPNLEIETGEIAGAGHASATGRFDDEQLFYLRSRGIPEEDA
CEEEECCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHH
RRLVVRGFFQDIIGRIGIESVRDRLTEAIEQELQANAN
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SNLTDSTPGGSNLAGAVEGTGINKGELFSSYDVDAFEVPGGRDELWRFTPLRRLRGLHD
CCCCCCCCCCCCCCCEEECCCCCCCCEECCCCCCEEECCCCHHHHHEECHHHHHCCCCC
GTAVATAAAPVAVNASGGVTVETVERSDDRLGQGGIPSDRVAAQAYSSFSTATVVSVGKQ
CCEEEEECCCEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCH
QVVADPIEISLSGPGQGQVAYGHTQVRAGALSESAVVIDYRGSGTYAENVEFVLDDAARL
HEECCCEEEEECCCCCCCEEECCCEEEECCCCCCEEEEEECCCCCCCCCCEEEECCCCEE
TVVSIADWADDAVHVTTHHAKLGKDAVLRHIAVTLGGDVVRLTGTVRFGAPGGDAELLGL
EEEEEECCCCCEEEEEECHHHCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEEEE
YYADEGQFFEHRLLVDHAQPNCKSNVVYKGALQGDPSSDKPDAHTVWIGDVLIRAEATGT
EEECCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEEEECCCC
DTFELNRNLILTDGARADSVPNLEIETGEIAGAGHASATGRFDDEQLFYLRSRGIPEEDA
CEEEECCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHH
RRLVVRGFFQDIIGRIGIESVRDRLTEAIEQELQANAN
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]